an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

dihydrolipoate

5-aminopentanoate

2-dehydro-3-deoxy-D-gluconate

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

tartronate semialdehyde

S-acetyldihydrolipoamide

dihydrolipoamide

selenophosphate

urocanate

4-imidazolone-5-propanoate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

(R)-pantothenate

4-guanidinobutanoate

4-guanidinobutyramide

acrylate

acrylamide

(indol-3-yl)acetamide

propionamide

ManNAc-GlcNAc-PP-undecaprenol

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

2-isopropylmaleate

4'-phosphopantetheine

arsenite

prephytoene diphosphate

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate

1,4-dihydroxy-2-naphthoyl-CoA

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

hydroxypyruvate

glycolate

2-maleylacetate

α-D-galactosyl-diphosphoundecaprenol

2-C-methyl-D-erythritol 4-phosphate

3-dehydroshikimate

3-dehydroquinate

2-oxoglutaramate

N6'-acetylkanamycin-B

D-gluconate 6-phosphate

2-chloroethanol

1,2-dichloroethane

(1S,4R)-2,4,5-trichloro-2,5-cyclohexadiene-1-diol

(3R,6R)-1,3,4,6-tetrachlorocyclohexa-1,4-diene

(1S,4S)-2,5-dichloro-2,5-cyclohexadiene-1,4-diol

tryptamine

S-Inosyl-L-homocysteine

propane-1,3-diamine

acetoacetate

3α,7α-dihydroxy-24-oxo-5β-cholestanoyl CoA

(S)-5-hydroxyisourate

4-aminobutanoate

salicyl alcohol

methylsalicylate

formamide

(1R,2R)-1,2-diphenylethane-1,2-diol

cis-stilbene oxide

2,5-didehydro-D-gluconate

2-keto-D-gluconate

acetyl phosphate

homogentisate

(2-hydroxyphenyl)acetate

γ-L-glutamyl 5-phosphate

2-dehydropantoate

5-methylcytosine

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

3'-phosphoadenylyl-sulfate

α-ribazole 5'-phosphate

5,6-dimethylbenzimidazole

1-piperideine 6-carboxylate

4-oxoglutaramate

(3E)-2-oxopent-3-enoate

2,6-dioxo-6-phenylhexa-3-enoate

cyclic-2,3-O-oxalyl-L-threonate

dehydroascorbate (bicyclic form)

ammonia

5-hydroxyindole thiazolidine carboxylate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

cyclic- 3,4-O-oxalyl-L-threonate

2,3-dioxo-L-gulonate

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

2-carboxy-L-xylonolactone

2-carboxy-L-threo-pentonate

5-amino-6-(D-ribitylamino)uracil

urea

(S)-4-amino-5-oxopentanoate

preuroporphyrinogen

porphobilinogen

5-aminolevulinate

L-xylo-hex-3-ulono-1,4-lactone

L-gulono-1,4-lactone

mercuriphenyl acetate

2-hydroxy-3-oxosuccinate

L-tartrate

meso-tartrate

6-aminohexanoate

6-aminohexanoate linear dimer

3-methylbutanal

7''-O-phosphohygromycin B

nigerose

2,3-didehydroadipyl-CoA

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

(E)-2-benzylidenesuccinyl-CoA

1,4-dihydroxy-2-naphthoate

hydrogenobyrinate a,c-diamide

hydrogenobyrinate

4-amino-4-deoxychorismate

S-methyl-5'-thioadenosine

S-adenosyl 3-(methylsulfanyl)propylamine

N²-succinylglutamate

N²-succinyl-L-glutamate 5-semialdehyde

DNA without lesion

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

benzoylsuccinyl-CoA

shikimate

methyl-1,4-benzoquinol

2-methyl-1,4-benzoquinone

2-oleoylglycerol

ADP-L-glycero-β-D-manno-heptose

3-methyl-2-butenal

lanthionine

butyramide

(L-threonylcarbamoyl)adenylate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

D-erythro-imidazole-glycerol-phosphate

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

2-phenylethanol

2-methylbutanal

2-methylbutanol

3-methylbutanol

isobutanol

indole-3-glycol aldehyde

indole-3-glycol

5-hydroxytryptophol

L-histidinol phosphate

imidazole acetol-phosphate

N-Formyl-L-kynurenine

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

carbonic acid

carbon monoxide

2-succinylbenzoate

succinate semialdehyde

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

isochorismate

4-methyl-3-oxoadipate-enol-lactone

3-methylmuconolactone

(4,5-dihydro-5-oxofuran-2-yl)-acetate

muconolactone

thiamine phosphate

ethanolamine

2-iminoacetate

ethylamine

N-ethylglycine

methylamine

5-deoxy-α-ribose 1-phosphate

pregn-5-ene-3,20-dione

pregn-5-ene-3,20-dione-17-ol

5-androstene-3,17-dione

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

coenzyme F₃₉₀-A

(S)-2-amino-6-oxohexanoate

3-[(4-amino-6-chloro-1,3,5-triazin-2-yl)amino]benzenesulfonate

2,2'-disulfonyl azobenzene

phthalate

(S)-dihydroorotate

creatinine

4-fumaryl-acetoacetate

4-maleyl-acetoacetate

3-hydroxyanthranilate

3-oxopropanoate

5-aminopentanal

aminoacetone

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

1-deoxy-L-glycero-tetrulose 4-phosphate

α-ribazole

N-(2,3-dihydroxybenzoyl)-L-serine trimer

(2S)-lactyl-2-diphospho-5'-guanosine

7,8-didemethyl-8-hydroxy-5-deazariboflavin

3-phosphooxypyruvate

chlorite

chlorate

(R)-1-amino-2-propanol O-2-phosphate

dialurate

2-amino-3-carboxymuconate-6-semialdehyde

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-phosphooxy-L-threonine

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

chloroacetaldehyde

(S)-ureidoglycolate

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

7-epicholate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

α-D-glucosamine 1-phosphate

2-oxopent-4-enoate

(2E)-2-hydroxypenta-2,4-dienoate

3-hydroxypropanoate

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

adipate

6-oxohexanoate

6-aminohexanoate cyclic dimer

glutathione disulfide

autoinducer 2

S-ribosyl-L-homocysteine

glutathioselenol

selenodiglutathione

α-D-galacturonate 1-phosphate

L-dehydro-ascorbate

CO₂

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

H₂O

(R)-4'-phosphopantothenoyl-L-cysteine

(R)-4'-phosphopantothenate

O-acetyl-L-serine

hydrogen selenide

coproporphyrinogen III

oxaloacetate

4-methyl-3-oxoadipate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

isopentenyl diphosphate

prenyl diphosphate

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

5-carboxymethyl-2-hydroxymuconate

oxalate

5-enolpyruvoyl-shikimate 3-phosphate

phosphoenolpyruvate

histidinol

histidinal

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

citrate

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

2-oxovalerate

3-ethylmalate

4-methyl-2-oxopentanoate

(2S)-2-isopropyl-3-oxosuccinate

(2R,3S)-3-isopropylmalate

3-methyl-2-oxobutanoate

(S)-3-methyl-2-oxopentanoate

(R)-2,3-dihydroxy-3-methylpentanoate

L-arginino-succinate

canavaninosuccinate

O-ureido-L-homoserine

L-canavanine

oxalosuccinate

hydrogen peroxide

4-methylumbelliferyl glucoside

4-hydroxybenzaldehyde

scopolin

cis-coumarinic acid-β-D-glucoside

prephenate

shikimate 3-phosphate

xanthine

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

6-phospho D-glucono-1,5-lactone

nicotinate adenine dinucleotide

β-nicotinate D-ribonucleotide

thiamine diphosphate

2-(α-hydroxyethyl)thiamine diphosphate

5-(methylsulfanyl)-ribulose 1-phosphate

S-methyl-5-thio-α-D-ribose 1-phosphate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

(2S)-2-isopropylmalate

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

carbonyl sulfide

quinolinate

3-deoxy-D-arabino-heptulosonate 7-phosphate

N-(5-phosphoribosyl)-anthranilate

anthranilate

2-amino-2-deoxy-D-gluconate 6-phosphate

glycerone phosphate

dihydroxyacetone

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

N-acetyl-D-muramate 6-phosphate

3-keto-β-D-galactose

4-imidazoleacetate

imidazole acetaldehyde

5-hydroxyindole acetate

5-hydroxyindole acetaldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

3,4-dihydroxyphenylacetaldehyde

propynoate

prop-2-ynal

D-glucurono-6,3-lactone

4-acetamidobutanoate

4-acetamidobutanal

dimethylsulfoniopropanoate

carbamoyl phosphate

orotidine 5'-phosphate

5-oxo-L-proline

H₂

(2E,6E)-farnesol

(2E,6E)-farnesyl diphosphate

hypoglycin B

L-kynurenine

L-phenylalanine

L-leucine

L-isoleucine

L-methionine

L-cysteine

L-selenocysteine

L-alanine

L-valine

L-proline

glycine

L-tryptophan

L-lysine

L-aspartyl-4-phosphate

L-cystathionine

L-asparagine

N^ω-hydroxy-L-arginine

L-2,4-diaminobutanoate

L-isoglutamine

L-threonine

L-glutamate

L-glutamine

L-histidine

L-tyrosine

L-aspartate

L-arginine

L-ornithine

L-serine

N-carbamoyl-L-aspartate

formyl-L-isoglutamine

N-acetyl-L-citrulline

N-acetyl-L-ornithine

N-formimino-L-glutamate

L-citrulline

L-cystine

O-succinyl-L-homoserine

L-dopa

1-aminocyclopropane-1-carboxylate

L-glutamate-5-semialdehyde

hypoglycin A

L-4-hydroxyglutamate semialdehyde

L-canaline

S-sulfo-L-cysteine

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

L-homocysteine

L-aspartate 4-semialdehyde

L-homoserine

O-phospho-L-homoserine

meso-diaminopimelate

S-sulfanyl-L-cysteine

L-selenomethionine

seleno-L-homocysteine

2-hydroxy-5-oxoproline

L-saccharopine

L-2-amino-3-oxobutanoate

O-acetyl-L-homoserine

cis-4-hydroxy-D-proline

5-hydroxy-L-tryptophan

3-hydroxy-L-kynurenine

trans-4-hydroxy-L-proline

N-acetyl-L-glutamate

N-acetyl-L-methionine

sarcosine

S-methyl-L-methionine

3-phospho-L-serine

D-alanine

D-glutamate

D-proline

creatine

β-alanine

adenosine 2',3'-cyclic monophosphate

guanosine 2',3'-cyclic monophosphate

XMP

ppGpp

pppGpp

isoguanine

8-oxo-dGTP

8-oxo-GTP

1-(5-phospho-β-D-ribosyl)-AMP

cyclic-GMP

cyclic-AMP

dIMP

XTP

dGMP

dAMP

AMP

ATP

ADP

5'-deoxyadenosine

guanosine 3'-monophosphate

adenosine 3'-monophosphate

dADP

GDP

dGDP

adenylo-succinate

GTP

2'-deoxyadenosine

2'-deoxyguanosine

hypoxanthine

2'-deoxyinosine

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

GMP

dATP

dGTP

ITP

IDP

dITP

dIDP

1-(5-phospho-β-D-ribosyl)-ATP

IMP

ADP-α-D-glucose

GDP-α-D-mannose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-mannosamine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-α-D-sulfoquinovopyranose

UDP-α-D-galacturonate

UDP-α-D-galactose

UDP-α-D-glucose

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

adenine

guanine

cytosine

thymine

uracil

preQ₁

cyclic di-3',5'-guanylate

cytidine 2',3'-cyclic monophosphate

uridine 2'3'-cyclic monophosphate

dTMP

dUMP

dCMP

dCDP

dUDP

dTDP

dCTP

dTTP

dUTP

CDP

UDP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

reduced β-nicotinamide D-ribonucleotide

CTP

UTP

CMP

UMP

5-hydroxy-CTP

2-hydroxy-dATP

NAD⁺

NADP⁺

NADH

NADPH

uridine 3'-monophosphate

cytidine-3'-monophosphate

2'-deoxycytidine

thymidine

2'-deoxyuridine

adenosine

inosine

guanosine

xanthosine

cytidine

uridine

5-fluorouracil

5'-deoxy-5'-fluoroadenosine

5-fluorocytosine

D-altronate

L-gulonate

aldehydo-L-galactonate

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

3'-ketolactose

hygromycin-B

kanamycin B

lotaustralin

taxiphyllin

linamarin

linustatin

neolinustatin

D-sedoheptulose 7-phosphate

4-phospho-D-erythronate

5-phospho-α-D-ribose 1-diphosphate

D-erythrose 4-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

L-rhamnulose 1-phosphate

α-D-galactose 1-phosphate

α-D-mannose 1-phosphate

α-D-glucopyranose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

α-D-galactose 6-phosphate

β-D-galactose 6-phosphate

D-tagatofuranose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-ribose-1-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

2-deoxy-α-D-ribose 1-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

sucrose 6^F-phosphate

α,α-trehalose 6-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (E. faeciums)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (mycobacteria)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

α-L-rhamnopyranose

β-L-rhamnopyranose

β-D-fructofuranose

keto-D-fructose

glycolaldehyde

aldehydo-L-arabinose

α-D-xylopyranose

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

β-D-galactopyranose

α-D-galactopyranose

β-D-mannopyranose

β-D-glucopyranose

α-D-glucopyranose

aldehydo-D-mannose

D-glyceraldehyde

α-D-lyxopyranose

L-glyceraldehyde

D-xylulose

keto-L-rhamnulose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-β-D-glucosamine

glycerol

D-mannitol

galactitol

L-arabinitol

xylitol

XXXG xyloglucan oligosaccharide

cellotetraose

β-D-cellobiose

maltotriose

(heptosyl)₂-Kdo₂-lipid A

heptosyl-Kdo₂-lipid A

sucrose

α-maltose

α-lactose

α,α-trehalose

maltotetraose

maltopentaose

maltohexaose

maltoheptaose

XXLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XLLG xyloglucan oligosaccharide

aldehydo-D-galacturonate

salicylaldehyde

4-methylumbelliferone

coumarin

scopoletin

all-trans-retinol

all-trans-retinyl palmitate

brassicasterol

stigmasterol

sitosterol

3-oxo-24-ethyl-cholest-5-ene

3-oxo-24-ethyl-cholest-4-ene

3-oxo-24-ethyl-26-hydroxy-cholest-4-ene

3-oxo-24-ethyl-cholest-4-en-26-oyl-CoA

3-oxo-24-ethyl-cholest-4,24-dien-26-oyl-CoA

3-oxo-24-(isopropanoyl)-cholest-4,24-dien-26-oyl-CoA

3,24-dioxo-cholest-4-en-26-oate

3-oxo-24-ethyl-cholest-4-en-26-oate

3-oxo-24-ethyl-26-al-cholest-4-ene

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

apo-4'-lycopenal

torulene

spirilloxanthin

4'-apo-β-carotenal

15-cis-phytoene

all-trans-3,4-didehydrolycopene

all-trans phytofluene

spheroiden-2-one

spheroidene

all-trans neurosporene

methoxyneurosporene

1-hydroxyneurosporene

demethylspheroidene

2,2'-dioxospirilloxanthin

2-oxospirilloxanthin

zeaxanthin

violaxanthin

antheraxanthin

apo-4'-lycopenoate

ferric-[N-(2,3-dihydroxybenzoyl)-L-serine trimer] complex

solasodine

miraxanthin V

betalamate

(3R)-hydroxy-nonanoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

(2E,5E)-dodeca-2,5-dienoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

2-trans, 5-cis, 7-trans-tetradecatrienoyl-CoA

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

4-cis-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

4-trans-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

2-trans-nonenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3E)-dec-3-enoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

geranylgeranyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-decaprenyl diphosphate

3-octaprenyl-4-hydroxybenzoate

1-oleoyl-sn-glycerol 3-phosphate

trehalose-trans-keto-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

6-O-α-mycolyl-trehalose 6-phosphate

myo-inositol

1-amino-1-deoxy-scyllo-inositol

scyllo-inosose

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

1D-myo-inositol 3-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 2-monophosphate

biphenyl-2,3-diol

dopamine

3,4-dihydroxyphenylglycol

protocatechuate

3,4-dihydroxymandelate

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylacetate

phytol

propan-1-ol

butan-1-ol

ethanol

methanol

fluoroacetaldehyde

(2E,6E)-farnesal

methylglyoxal

phenylacetaldehyde

(4-hydroxyphenyl)acetaldehyde

benzaldehyde

phytenal

(S)-lactaldehyde

(R)-lactaldehyde

isobutanal

1-propanal

butan-1-al

formaldehyde

acetaldehyde

1-octanal

menadione

caldariellaquinone

Reactive Blue 5

diacetyl

a coenzyme-A group

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

pyruvate

2-oxoglutarate

glyoxylate

2-oxobutanoate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

salicylate

4-aminobenzoate

benzoate

acetate

(R)-pantoate

allantoate

orotate

fluoroacetate

D-tagaturonate

aldehydo-D-glucuronate

(S)-1-pyrroline-5-carboxylate

decanoate

palmitate

octanoate

(9Z,15Z)-12,13-epoxy-octadeca-9,15-dienoate

(12Z,15Z)-9,10-epoxyoctadeca-12,15-dienoate

(9Z,12Z)-15,16-epoxyoctadeca-9,12-dienoate

(9Z,13S,15Z)-12,13-epoxyoctadeca-9,11,15-trienoate

linoleate

γ-linolenate

(9Z,15Z)-12,13-dihydroxyoctadeca-9,15-dienoate

(12Z,15Z)-9,10-dihydroxyoctadeca-12,15-dienoate

(9Z,12Z)-15,16-dihydroxyoctadeca-9,12-dienoate

dinor-12-oxo-phytodienoate

(3E,5Z)-tetradecadienoate

oleate

phytenate

(2E,6E)-farnesoate

leukotriene-E4

leukotriene-D4

3-oxoadipate

formate

propanoate

(S)-lactate

(R)-lactate

(2R,3S)-2-methylisocitrate

(R)-glycerate

(R)-3-hydroxybutanoate

cis-aconitate

cis-2-methylaconitate

(2S,3S)-2-methylcitrate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

(3E)-2-oxohex-3-enedioate

chorismate

D-glucarate

succinate

fumarate

(S)-malate

(4S)-4-hydroxy-2-oxoglutarate

(2E,4E)-6-(2-aminophenyl)-2-hydroxy-6-oxohexa-2,4-dienoate

2'-aminobiphenyl-2,3-diol

urate

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

benzene

2-[(1R,6S)-1,6-dihydroxycyclohexa-2,4-dien-1-yl]acetyl-coA

4-hydroxybenzoate

4-tyrosol

coumarinate

2,5-dichlorophenol

3-amino-4-hydroxybenzoate

3-amino-4-hydroxybenzaldehyde

2-phenylethylamine

serotonin

3-acetylamino-4-hydroxybenzoate

3-acetylamino-4-hydroxybenzaldehyde

4-methylphenol

menadiol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

caldariellaquinol

3-demethylubiquinol-10

3-demethylubiquinol-8

demethylmenaquinol-8

demethylmenaquinol-10

demethylmenaquinol-7

menaquinol-8

menaquinol-10

menaquinol-7

ubiquinol-10

ubiquinol-8

indole

(indol-3-yl)acetaldehyde

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

3-methoxy-4-hydroxyphenylglycol

vanillyl mandelate

preQ₀

(indole-3-yl)acetonitrile

propionitrile

acrylonitrile

3-cyanopyridine

hydrogen cyanide

n-butyronitrile

(2R)-2-hydroxy-2-methylbutanenitrile

2-hydroxy-2-methylpropanenitrile

molybdopterin

cyclic pyranopterin phosphate

molybdopterin adenine dinucleotide

7,8-dihydroneopterin

7,8-dihydroneopterin 3'-phosphate

7,8-dihydroneopterin 3'-triphosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

7,8-dihydropteroate

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

riboflavin

FMN

FAD

FMNH₂

reduced riboflavin

FADH₂

6,7-dimethyl-8-(1-D-ribityl)lumazine

9H carbazole

cob(I)alamin

adenosylcobalamin

cobyrinate

sirohydrochlorin

cobalt-precorrin-4

cobalt-precorrin-3

precorrin-3A

precorrin-3B

precorrin-4

precorrin-5

precorrin-6A

precorrin-6B

precorrin-8x

precorrin-7

cobalt-precorrin-5A

cobalt-precorrin-6A

cobalt-precorrin-5B

cobalt-precorrin-6B

cobalt-precorrin-8

cobalt-precorrin-7

precorrin-2

precorrin-1

nicotinate

nicotinamide

thiamine

L-ascorbate

pyridoxal 5'-phosphate

pyridoxine 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxamine

pyridoxine

pyridoxal

(R)-lipoate

coenzyme A

oxidized coenzyme F₄₂₀-2

(R)-NADHX

(S)-NADHX

glycine betaine

cis-dienelactone

trans-dienelactone

L-galactono-1,4-lactone

3'-dephospho-CoA

3-methylglutaconyl-CoA

3-methylcrotonyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

choloyl-CoA

3α,7α,12α-trihydroxy-24-oxo-5-β-cholestanoyl CoA

chenodeoxycholoyl-CoA

2-methylfumaryl-CoA

(2R,3S)-β-methylmalyl-CoA

3-methylfumaryl-CoA

(3S)-hydroxyadipyl-CoA

(E)-2-methylcrotonoyl-CoA

3-hydroxyisovaleryl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

(2E,5Z)-tetradecenoyl-CoA

methylacrylyl-CoA

benzoyl-CoA

acryloyl-CoA

3-hydroxypropanoyl-CoA

2-methylbutanoyl-CoA

isovaleryl-CoA

(2S)-methylsuccinyl-CoA

acetyl-CoA

succinyl-CoA

2-methylacetoacetyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

(+)-7-epi-jasmonoyl-CoA

4-hydroxybenzoyl-CoA

phenylacetyl-CoA

malonyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

4-methyl-3-oxoadipyl-CoA

3-oxoadipyl-CoA

3-oxo-palmitoyl-CoA

3-oxo-myristoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

3-oxododecanoyl-CoA

3-oxooctanoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

palmitoyl-CoA

2-hydroxyphytanoyl-CoA

phytanoyl-CoA

octanoyl-CoA

lauroyl-CoA

decanoyl-CoA

hexanoyl-CoA

propanoyl-CoA

butanoyl-CoA

cerotoyl-CoA

2-carboxy-cerotoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

(3S)-citramalyl-CoA

(S)-malyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

crotonyl-CoA

(S)-methylmalonyl-CoA

(R)-methylmalonyl-CoA

androsterone

pregnenolone

testosterone

progesterone

campest-4-en-3-one

methyl (indol-3-yl)acetate

phenylacetate

(indol-3-yl)acetate

3-oxochol-4-en-24-oyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

3α,7α,12β-trihydroxy-5β-cholan-24-oate

(25S)-3-oxocholest-4-en-26-oyl-CoA

3-oxocholest-4,24-dien-26-oyl-CoA

3-oxochol-4,22-dien-24-oyl-CoA

22-hydroxy-3-oxochol-4-en-24-oyl-CoA

3-oxo-4,17-pregnadiene-20-carboxyl-CoA

17-hydroxy-3-oxo-4-pregnane-20-carboxyl-CoA

(25S)-3-oxocholest-4-en-26-oate

(25S)-26-oxocholest-4-en-3-one

(25S)-26-hydroxycholest-4-en-3-one

cholest-4-en-3-one

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

17-α-hydroxypregnenolone

cholesterol

cholest-5-en-3-one

3-β-hydroxyandrost-5-en-17-one

cholesteryl-β-D-glucoside

stigmasterol 3-O-β-D-glucoside

solasodine 3-O-β-D-glucoside

brassicasterol 3-O-β-D-glucoside

β-sitosterol 3-O-β-D-glucoside

isocholate

3-dehydrocholate

glycocholate

cholate

campest-4-en-3β-ol

5α-androstane-3,17-dione

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

(S)-(+)-allantoin

6-caprolactam

acetamide

2-chloroacetate

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

choline

betaine aldehyde hydrate

betaine aldehyde

agmatine

spermine

spermidine

putrescine

dehydrospermidine

cadaverine

2-aminoprop-2-enoate

2-iminopropanoate

(2Z)-2-aminobut-2-enoate

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

selenide

thiosulfate

OH^-

nitrite

nitrate

hydrogensulfite

hydrogencarbonate

perchlorate

molybdate

superoxide

phosphonate

phosphate

triphosphate

diphosphate

chloride

Fe³⁺

H⁺

ammonium

K⁺

Fe²⁺

Mo²⁺

Co²⁺

Hg²⁺

Ca²⁺

Mg²⁺

S-(hydroxymethyl)glutathione

3-(methylsulfanyl)propanal

methionol

dimethyl sulfide

3-dimethylsulfoniopropionaldehyde

glutathione

(2R)-phospho-3-sulfolactate

3-sulfopyruvate

L-cysteate

sulfoacetaldehyde

(2R)-3-sulfolactate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

thiocyanate

methanethiol

S-sulfanylglutathione

nitric oxide

hydroxyl radical

monodehydroascorbate radical

2-methoxy-6-(all-trans-octaprenyl)phenol

2-octaprenylphenol

(S)-3-hydroxy-isobutanoate

3-(all-trans-octaprenyl)benzene-1,2-diol

5,10-methenyltetrahydrofolate mono-L-glutamate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

(S)-ureidoglycine

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

(2S)-2-phospholactate

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

2-phospho-D-glycerate

3-phospho-D-glycerate

sn-glycerol 3-phosphate

hydrogen sulfide

oxygen

protochlorophyllide a

chlorophyllide a

3,8-divinyl protochlorophyllide a

Mg-protoporphyrin

magnesium-protoporphyrin IX 13-monomethyl ester

protoporphyrinogen IX

coproporphyrinogen I

uroporphyrinogen-I

uroporphyrinogen-III

protoporphyrin IX

siroheme

protoheme

adenosylcobinamide-GDP

adenosyl-cobinamide phosphate

adenosylcobinamide

cob(I)inamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

cob(II)yrinate a,c-diamide

cob(II)yrinate c-monoamide

adenosylcobalamin 5'-phosphate

adenosylcobyrate

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

cobalt-sirohydrochlorin

cobalt-factor III

carboxyphosphinopyruvate

1-carboxyvinyl carboxyphosphonate

3-(hydroxyphosphinoyl)pyruvate

ethylphosphate

DNA with lesion

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-cysteinylglycine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

2-iminobutanoate

2-iminosuccinate