an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

ammonia

5-hydroxyindole thiazolidine carboxylate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

H₂O

CO₂

orotidine 5'-phosphate

carbamoyl phosphate

(S)-dihydroorotate

prenyl diphosphate

isopentenyl diphosphate

D-gluconate 6-phosphate

oxaloacetate

(S)-3-methyl-2-oxopentanoate

4-methyl-2-oxopentanoate

3-methyl-2-oxobutanoate

succinate semialdehyde

4-aminobutanoate

3-oxopropanoate

glycerone phosphate

L-arginino-succinate

L-canavanine

canavaninosuccinate

O-ureido-L-homoserine

hydrogen peroxide

acetyl phosphate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

2-dehydropantoate

nicotinate adenine dinucleotide

xanthine

phosphoenolpyruvate

dihydroxyacetone

autoinducer 2

S-ribosyl-L-homocysteine

α-D-glucosamine 1-phosphate

tartronate semialdehyde

1,4-dihydroxy-2-naphthoyl-CoA

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

glycolate

5-methylcytosine

2-phenylethanol

2-methylbutanal

2-methylbutanol

3-methylbutanal

3-methylbutanol

isobutanol

indole-3-glycol aldehyde

indole-3-glycol

3-methoxy-4-hydroxyphenylglycolaldehyde

5-hydroxyindole acetaldehyde

5-hydroxytryptophol

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

benzoylsuccinyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

N-acetyl-D-muramate 6-phosphate

6-aminohexanoate linear dimer

6-aminohexanoate cyclic dimer

β-nicotinate D-ribonucleotide

N-acetyl-L,L-2,6-diaminopimelate

(S)-2,3,4,5-tetrahydrodipicolinate

ManNAc-GlcNAc-PP-undecaprenol

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

2-succinylbenzoate

DNA without lesion

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

3-[(4-amino-6-chloro-1,3,5-triazin-2-yl)amino]benzenesulfonate

2,2'-disulfonyl azobenzene

phthalate

1,4-dihydroxy-2-naphthoate

glutathione disulfide

2-oleoylglycerol

5-deoxy-α-ribose 1-phosphate

S-methyl-5-thio-α-D-ribose 1-phosphate

S-methyl-5'-thioadenosine

5-(methylsulfanyl)-α-D-ribose

3-keto-β-D-galactose

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

4-pyridoxolactone

(lipoyl)adenylate

methylsalicylate

salicyl alcohol

(2E,4Z)-2-hydroxymuconate

(2Z,4E)-2-hydroxy-5-methyl-6-oxohexa-2,4-dienoate

2-hydroxy-6-oxohepta-2,4-dienoate

(2Z,4E)-2-hydroxy-6-oxohexa-2,4-dienoate

(2E,4Z)-2-hydroxy-6-oxohepta-2,4-dienoate

(indol-3-yl)pyruvate

O-acetyl-L-serine

hydrogen selenide

L-selenocystathionine

CDP-glycerol

poly (glycerol phosphate)

urea

2-O-(6-phospho-α-D-mannosyl)-D-glycerate

thiamine diphosphate

2-(α-hydroxyethyl)thiamine diphosphate

2,5-didehydro-D-gluconate

5-dehydro-D-gluconate

2-keto-L-gulonate

ethanolamine

(R)-mevalonate

4-acetamidobutanoate

4-acetamidobutanal

N²-succinylglutamate

N²-succinyl-L-glutamate 5-semialdehyde

dimethylsulfoniopropanoate

D-glucurono-6,3-lactone

propynoate

prop-2-ynal

3,4-dihydroxyphenylacetaldehyde

5-hydroxyindole acetate

4-imidazoleacetate

imidazole acetaldehyde

O-D-alanyl-poly(ribitol phosphate)

poly(ribitol phosphate)

carbonic acid

(4,5-dihydro-5-oxofuran-2-yl)-acetate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

γ-L-glutamyl 5-phosphate

(R)-4'-phosphopantothenoyl-L-cysteine

(R)-4'-phosphopantothenate

4'-phosphopantetheine

(L-threonylcarbamoyl)adenylate

2-maleylacetate

2-phosphoglycolate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

isochorismate

3-hydroxypropanal

1,3-propanediol

6-phospho D-glucono-1,5-lactone

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-amino-2-methyl-5-pyrimidinemethanol

(R)-mevalonate diphosphate

(R)-5-phosphomevalonate

arsenite

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

hydroxypyruvate

estrone 3-sulfate

3-β-hydroxyandrost-5-en-17-one 3-sulfate

3-(O-geranylgeranyl)-sn-glycerol 1-phosphate

4-prenylphlorisobutyrophenone

1,6-anhydro-N-acetyl-β-muramate

5-dehydro-4-deoxy-D-glucarate

carbon monoxide

acetoacetate

citrate

H₂

oxalosuccinate

quinolinate

(R)-2,3-dihydroxy-3-methylpentanoate

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

indole-3-lactate

2-iminoacetate

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

N¹-(5-phospho-β-D-ribosyl)glycinamide

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

adipate

6-oxohexanoate

6-aminohexanoate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

(4-hydroxyphenyl)acetate

(2E,6E)-farnesyl diphosphate

DNA with lesion

preQ₀

4-tyrosol

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

salicylaldehyde

hydroquinone

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylglycol

3-sulfocatechol

4-methylcatechol

3-methylcatechol

catechol

3,4-dihydroxyphenylacetate

3,4-dihydroxymandelate

2,3-dihydroxybenzoate

protocatechuate

salicylate

4-aminobenzoate

benzoate

4-methylphenol

(indol-3-yl)acetaldehyde

phenylacetaldehyde

(4-hydroxyphenyl)acetaldehyde

benzaldehyde

3-methoxy-4-hydroxyphenylglycol

vanillyl mandelate

demethylmenaquinol-8

menaquinol-8

(2E,6E)-farnesal

β-D-glucopyranose

α-D-glucopyranose

α-D-galactopyranose

β-D-galactopyranose

β-D-ribopyranose

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

D-glyceraldehyde

methylglyoxal

phytenal

(S)-lactaldehyde

(R)-lactaldehyde

isobutanal

1-propanal

acetaldehyde

formaldehyde

1-octanal

butan-1-al

Reactive Blue 5

diacetyl

(R)-acetoin

α-D-glucosamine 6-phosphate

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

2-iminopropanoate

2-iminobutanoate

2-iminosuccinate

5-amino-4-imidazolecarboxyamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

6-caprolactam

nicotinamide

L-α-amino-ε-keto-pimelate

L-isoleucine

L-valine

L-leucine

L-phenylalanine

glycine

L-alanine

L-tryptophan

L-proline

L-selenocysteine

L-methionine

L-cysteine

L-aspartate

L-glutamate

L-glutamine

L-asparagine

L,L-diaminopimelate

L-aspartyl-4-phosphate

L-arginine

L-threonine

L-serine

L-lysine

L-ornithine

L-tyrosine

L-cystathionine

L-2-acetamido-6-oxoheptanedioate

N-formimino-L-glutamate

N-acetyl-L-citrulline

N-acetyl-L-ornithine

N-carbamoyl-L-aspartate

L-citrulline

L-aspartate 4-semialdehyde

L-homoserine

L-homocysteine

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

S-sulfo-L-cysteine

L-canaline

L-glutamate-5-semialdehyde

O-succinyl-L-homoserine

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

seleno-L-homocysteine

N-acetyl-L-methionine

N-acetyl-L-glutamate

D-glutamate

D-alanine

D-aspartate

β-alanine

phlorisovalerophenone

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

neoabietadiene

(+)-copalyl diphosphate

all-trans-retinol

all-trans-retinyl palmitate

geranyl diphosphate

(3S)-linalool

(3R)-linalool

apo-4'-lycopenal

apo-4'-lycopenoate

deoxycohumulone

4-prenylphlorisovalerophenone

deoxyhumulone

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

1-oleoyl-2-palmitoyl-phosphatidylglycerol

putrescine

spermidine

spermine

N¹-acetylspermine

N-acetylputrescine

N¹-acetylspermidine

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

D-glucono-1,5-lactone

trans-dienelactone

cis-dienelactone

3'-dephospho-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

acetyl-CoA

(3S)-hydroxyadipyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

malonyl-CoA

succinyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

2-methylacetoacetyl-CoA

4-hydroxybutanoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

2-methylbutanoyl-CoA

oleoyl-CoA

palmitoyl-CoA

propanoyl-CoA

butanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

3-oxoadipyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

3-oxo-palmitoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxooctanoyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

(S)-malyl-CoA

crotonyl-CoA

FAD

FMN

FMNH₂

NADP⁺

NAD⁺

NADPH

NADH

(R)-NADHX

(S)-NADHX

S-(hydroxymethyl)glutathione

3-(methylsulfanyl)propanal

methionol

3-dimethylsulfoniopropionaldehyde

dimethyl sulfide

glutathione

(R)-S-lactoylglutathione

3-sulfopyruvate

L-cysteate

5-(2-hydroxyethyl)-4-methylthiazole

ADP

ATP

AMP

GDP

GTP

adenylo-succinate

IMP

GMP

XMP

dADP

dGDP

dATP

dGTP

5'-deoxyadenosine

2'-deoxyinosine

2'-deoxyadenosine

dITP

dIDP

ITP

IDP

hypoxanthine

dGMP

2'-deoxyguanosine

ppGpp

pppGpp

dAMP

2'-deoxyuridine

thymidine

2'-deoxycytidine

inosine

adenosine

guanosine

xanthosine

cytidine

uridine

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

GDP-α-D-mannose

GDP-α-D-glucose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-α-D-galactose

UDP-α-D-glucose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-mannosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-glucosamine

uracil

thymine

cytosine

adenine

guanine

preQ₁

5-fluorouracil

5-fluorocytosine

dTMP

dUMP

dCMP

UMP

CMP

CTP

UTP

dCTP

dUTP

dTTP

cyclic di-3',5'-guanylate

dCDP

dUDP

dTDP

UDP

CDP

β-nicotinamide D-ribonucleotide

D-gluconate

XXXG xyloglucan oligosaccharide

3'-ketolactose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

methyl β-D-glucoside 6-phosphate

salicin 6-phosphate

arbutin-6-phosphate

5-phospho-α-D-ribose 1-diphosphate

α-D-galactose 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

α-D-galactose 6-phosphate

β-D-galactose 6-phosphate

D-fructose 6-phosphate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

D-tagatofuranose 6-phosphate

D-tagatofuranose 1,6-bisphosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

α-D-ribose-1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

D-ribulose 5-phosphate

L-ribulose 5-phosphate

N-monoacetylchitobiose 6'-phosphate

sucrose 6^F-phosphate

N,N'-diacetylchitobiose 6'-phosphate

α-lactose 6'-phosphate

β-D-cellobiose 6'-phosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (mycobacteria)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-D-alanyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with an L,D cross-link (Enterococcus faecium)

β-D-fructofuranose

keto-D-fructose

keto-L-sorbose

D-xylulose

D-ribulose

L-ribulose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-α-D-mannosamine

N-acetyl-β-D-glucosamine

glycerol

D-sorbitol

L-iditol

allolactose

sucrose

α-lactose

XLLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XXLG xyloglucan oligosaccharide

myo-inositol

1D-myo-inositol 2-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 3-monophosphate

1D-myo-inositol 1-monophosphate

phytol

propan-1-ol

ethanol

butan-1-ol

methanol

estrone

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

pyruvate

acetate

formate

(R)-lactate

(S)-lactate

butanoate

orotate

(R)-pantoate

(S)-1-pyrroline-5-carboxylate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

2-oxoglutarate

2-oxobutanoate

glyoxylate

4-(methylsulfanyl)-2-oxobutanoate

octanoate

palmitate

phytenate

(2E,6E)-farnesoate

3-oxoadipate

4-hydroxybutanoate

(R)-glycerate

cis-aconitate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

chorismate

D-glucarate

D-galactarate

succinate

fumarate

(S)-malate

Gro-P-ManNAc-GlcNAc-PP-undecaprenol

riboflavin

reduced riboflavin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydropteroate

7,8-dihydrofolate monoglutamate

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

cob(I)alamin

adenosylcobalamin

trimethyl sulfonium

sulfate

sulfite

thiosulfate

hydrogensulfite

hydrogencarbonate

superoxide

phosphonate

phosphate

diphosphate

triphosphate

Fe³⁺

Fe²⁺

Ca²⁺

H⁺

ammonium

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3-β-hydroxyandrost-5-en-17-one

coenzyme A

(R)-lipoate

nicotinate

thiamine

pyridoxal

pyridoxal 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxamine

pyridoxine 5'-phosphate

pyridoxine

dioleoyl phosphatidate

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

1-oleoyl-2-lyso-glycerone phosphate

1-oleoyl-sn-glycerol 3-phosphate

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

all-trans-octaprenyl diphosphate

geranylgeranyl diphosphate

5,10-methenyltetrahydrofolate mono-L-glutamate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

N-acetyl-D-mannosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

α-glucose 1,6-bisphosphate

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

2-phospho-D-glycerate

3-phospho-D-glycerate

sn-glycerol 3-phosphate

sn-glycerol 1-phosphate

oxygen

hydrogen sulfide

protoporphyrin IX

protoheme

adenosylcobyrate

adenosyl-cob(III)yrinate a,c-diamide