ID Name References
C1

an oxidized electron donor

C2

a reduced electron donor

C3

a deaminated amino group acceptor

C4

an aminated amino group acceptor

C5

Charged-LEU-tRNAs

C6

LEU-tRNAs

C7

a 2-oxo acid

C8

an amino acid

C9

an acyl-CoA

C10

a carboxylate

C11

an oxidized ferredoxin [iron-sulfur] cluster

C12

a reduced ferredoxin [iron-sulfur] cluster

C13

NAD(P)H

C14

NAD(P)+

C15

an L-tyrosyl-[tRNAtyr]

C16

a tRNAtyr

C17

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

C18

4α,14α-dimethyl-porifersta-8,25(27)-dienol

C24

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

C26

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

C27

isoshowacene

C29

2-hydroxyhexadecanal

C30

16-sinapoyloxypalmitate

C31

3-methylquinolin-2-ol

C32

(22R)-hydroxycholesterol

C37

N-(2-methylpropyl)hydroxylamine

C38

chloroeremomycin

C39

3-hydroxy-3-methylbutanoate

C40

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C41

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C42

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C43

rhamnosyl tetracyclic spinosyn pseudoaglycone

C44

rhamnosyl tricyclic spinosyn pseudoaglycone

C45

spinosyn tricyclic macrolactone

C46

11-dehydro-15-oxo spinosyn macrolactone

C47

15-oxo spinosyn macrolactone

C48

spinosyn macrolactone

C51

diethylamine N-oxide

C52

triethylamine N-oxide

C53

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

C55

nitroxyl

C57

trans,octacis-decaprenylphospho-β-D-arabinofuranose

C58

1,3-dihydro-2H-imidazol-2-one

C63

2-phenylethyl β-D-glucopyranoside

C64

formyl hopane

C65

ribosyl hopane

C66

adenosyl hopane

C70

(2Z)-2-hydroxypenta-2,4-dienoate

C72

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

C73

(2Z)-2,4-dihydroxypent-2-enoate

C75

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

C76

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

C77

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

C79

(+)-3'-hydroxylarreatricin

C80

(+)-larreatricin

C81

2-trans,4-trans-xanthoxin

C13702

1-piperideine 6-carboxylate

C1010

ammonia

C446

5-hydroxyindole thiazolidine carboxylate

C583

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C12274

enol-phenylpyruvate

C435

bisorganyltrisulfane

C582

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C11543

H2O

C3482

dihydroxyacetone

C1503

2-dehydro-3-deoxy-D-gluconate 6-phosphate

C928

CO2

C12368

(S)-2,3,4,5-tetrahydrodipicolinate

C15014

N-acetyl-L,L-2,6-diaminopimelate

C1002

anthranilate

C11946

N-(5-phosphoribosyl)-anthranilate

C15202

2-amino-2-deoxy-D-gluconate 6-phosphate

C10349

glycerone phosphate

C11932

N-acetyl-D-galactosamine 6-phosphate

C15282

D-galactosamine-6-phosphate

C12494

N-acetyl-D-muramate 6-phosphate

C3656

D-gluconate 6-phosphate

C6349

3-oxopropanoate

C8191

5-dehydro-2-deoxy-D-gluconate 6-phosphate

C8210

5-dehydro-2-deoxy-D-gluconate

C11836

hydroxypyruvate

C11483

glycolate

C1108

acetyl phosphate

C1018

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

C1020

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

C11606

thiamine phosphate

C12174

4-amino-2-methyl-5-pyrimidinemethanol

C6444

oxaloacetate

C12492

1,6-anhydro-N-acetyl-β-muramate

C13225

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

C11539

xanthine

C191

L-selenocystathionine

C8938

oxalate

C12162

hydrogen peroxide

C11832

orotidine 5'-phosphate

C1102

O-acetyl-L-serine

C13854

hydrogen selenide

C12369

3-dehydroquinate

C11723

L-quinate

C1431

3-dehydroshikimate

C11653

shikimate

C11479

phosphoenolpyruvate

C13919

4-guanidinobutanoate

C1303

4-guanidinobutyramide

C1096

acrylate

C1098

acrylamide

C8366

(indol-3-yl)acetamide

C11756

propionamide

C1353

3-phosphooxypyruvate

C11748

pseudouridine 5'-phosphate

C8407

5-hydroxyindole acetaldehyde

C8399

5-hydroxytryptophol

C423

3-methoxy-4-hydroxyphenylglycolaldehyde

C8410

indole-3-glycol aldehyde

C8344

indole-3-glycol

C12102

isobutanol

C13801

3-methylbutanal

C13800

3-methylbutanol

C11976

2-methylbutanal

C13799

2-methylbutanol

C13798

2-phenylethanol

C11493

2-phosphoglycolate

C12324

autoinducer 2

C12029

S-ribosyl-L-homocysteine

C12394

6-phospho D-glucono-1,5-lactone

C13813

O-D-alanyl-poly(ribitol phosphate)

C15283

poly(ribitol phosphate)

C13635

β-D-ribosylnicotinate

C11857

β-nicotinate D-ribonucleotide

C12254

ethanolamine

C4674

glutathione disulfide

C1066

o-(α-D-glucosyl)-polyglycerol phosphate

C12208

poly (glycerol phosphate)

C13879

(R)-mevalonate diphosphate

C13985

(R)-5-phosphomevalonate

C12218

α-D-glucosamine 1-phosphate

C15056

salicyl alcohol

C2580

methylsalicylate

C2325

α-D-galactosyl-diphosphoundecaprenol

C1538

2-C-methyl-D-erythritol 4-phosphate

C571

4-hydroxy-2-nonenal

C1363

(4,5-dihydro-5-oxofuran-2-yl)-acetate

C13689

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

C12176

histidinol

C12044

L-histidinol phosphate

C11812

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

C1172

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

C11774

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

C11802

4'-phosphopantetheine

C11690

S-acetyldihydrolipoamide

C12333

dihydrolipoamide

C11604

thiamine diphosphate

C1552

2-(α-hydroxyethyl)thiamine diphosphate

C13946

5-(methylsulfanyl)-α-D-ribose

C1196

S-methyl-5'-thioadenosine

C14074

prenyl diphosphate

C12364

isopentenyl diphosphate

C11964

(R)-mevalonate

C12352

(S)-dihydroorotate

C2191

carbamoyl phosphate

C939

butanoyl phosphate

C3417

(S)-3-methyl-2-oxopentanoate

C3262

3-methyl-2-oxobutanoate

C3319

4-methyl-2-oxopentanoate

C1528

2-dehydropantoate

C12125

imidazole acetol-phosphate

C12178

histidinal

C12390

D-erythro-imidazole-glycerol-phosphate

C13723

arsenite

C9422

nicotinate adenine dinucleotide

C11710

(R)-4'-phosphopantothenoyl-L-cysteine

C1268

(R)-4'-phosphopantothenate

C873

coproporphyrinogen III

C651

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

C1171

2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine

C1182

N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide

C1184

5-phospho-β-D-ribosylamine

C1180

N1-(5-phospho-β-D-ribosyl)glycinamide

C6359

(S)-2-acetolactate

C6369

(S)-2-aceto-2-hydroxybutanoate

C891

citrate

C1553

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

C11800

(R)-pantothenate

C11881

N-methylhydantoin

C11942

6-aminohexanoate linear dimer

C14102

6-aminohexanoate cyclic dimer

C11639

succinate semialdehyde

C12048

γ-L-glutamyl 5-phosphate

C142

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

C3344

2-dehydro-3-deoxy-D-gluconate

C12374

3-dehydro-2-deoxy-D-gluconate

C12375

2-deoxygluconate

C14145

3-deoxy-D-glycero-2,5-hexodiulosonate

C451

4-methylumbelliferyl glucoside

C1297

4-hydroxybenzaldehyde

C11662

scopolin

C13738

cis-coumarinic acid-β-D-glucoside

C12337

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

C12096

isochorismate

C1631

3-amino-1-hydroxyacetone 1-phosphate

C1548

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

C1265

4-phosphooxy-L-threonine

C12056

L-arginino-succinate

C933

L-canavanine

C932

canavaninosuccinate

C6614

O-ureido-L-homoserine

C13627

DNA without lesion

C1078

(S)-2-amino-6-oxohexanoate

C12192

carbonic acid

C12325

1,4-dihydroxy-2-naphthoate

C232

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

C12016

(lipoyl)adenylate

C6361

acetoacetate

C11873

N-succinyl-L,L-2,6-diaminopimelate

C14216

3-keto-L-gulonate 6-phosphate

C11654

selenophosphate

C13824

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

C11838

2-succinylbenzoate

C5991

3-keto-β-D-galactose

C3629

vanillin

C14202

hexulose 6-phosphate

C1440

nigerose

C908

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

C335

7-epicholate

C13284

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

C13283

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

C13281

1,4-dihydroxy-2-naphthoyl-CoA

C927

carbon monoxide

C14003

N-acetyl-L-glutamate 5-semialdehyde

C11930

N-acetylglutamyl-phosphate

C3343

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

C12164

H2

C11826

oxalosuccinate

C1321

4-aminobutanoate

C1092

adipate

C1149

6-oxohexanoate

C13579

6-aminohexanoate

C1621

(R)-2,3-dihydroxy-3-methylpentanoate

C12409

creatinine

C12848

N5-carboxyaminoimidazole ribonucleotide

C11715

quinolinate

C584

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C585

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C352

2-iminoacetate

C1112

ManNAc-GlcNAc-PP-undecaprenol

C13909

CDP-glycerol

C2346

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

C13986

pseudouridine

C1427

5-enolpyruvoyl-shikimate 3-phosphate

C11652

shikimate 3-phosphate

C7865

urea

C1291

(4-hydroxyphenyl)acetate

C1550

2-amino-3-carboxymuconate-6-semialdehyde

C9077

(2E,6E)-farnesyl diphosphate

C2774

pristanate

C10799

DNA with lesion

C4632

(glutathion-S-yl)-4-hydroxy-2-nonenal

C8537

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysine

C8545

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanine

C8518

γ-L-glutamyl-L-cysteine

C1434

D-alanyl-D-alanine

C2576

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

C2562

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

C6708

2-iminopropanoate

C6599

2-iminobutanoate

C6596

2-iminosuccinate

C3536

L-α-amino-ε-keto-pimelate

C5575

L-tryptophan

C2469

L-phenylalanine

C5597

L-alanine

C5592

L-selenocysteine

C5581

L-proline

C5588

L-leucine

C12067

glycine

C5603

L-isoleucine

C5571

L-valine

C5583

L-methionine

C5612

L-cysteine

C12073

L-aspartyl-4-phosphate

C5580

L,L-diaminopimelate

C5596

L-aspartate

C5584

L-lysine

C5579

L-serine

C5607

L-glutamate

C5595

L-cystathionine

C5609

L-glutamine

C5573

L-tyrosine

C12231

L-ornithine

C5643

L-asparagine

C5605

L-histidine

C5642

L-arginine

C5577

L-threonine

C13322

N-carbamoyl-L-aspartate

C5473

L-2-acetamido-6-oxoheptanedioate

C5478

N-formyl-L-glutamate

C15000

N-acetyl-L-ornithine

C14988

N-acetyl-L-citrulline

C12303

L-citrulline

C12239

L-aspartate 4-semialdehyde

C12247

L-homocysteine

C2426

S-sulfo-L-cysteine

C12227

O-succinyl-L-homoserine

C12245

L-homoserine

C12203

S-adenosyl-L-homocysteine

C15292

S-adenosyl-L-methionine

C12255

L-cystine

C12229

O-phospho-L-homoserine

C12233

L-glutamate-5-semialdehyde

C5585

meso-diaminopimelate

C12063

seleno-L-homocysteine

C2449

S-sulfanyl-L-cysteine

C12061

L-selenomethionine

C12065

L-saccharopine

C11957

L-proline betaine

C14973

N-acetyl-L-glutamate

C3628

sarcosine

C3402

3-phospho-L-serine

C8799

D-alanine

C8805

D-aspartate

C8797

D-glutamate

C11444

N-carbamoylsarcosine

C11441

β-alanine

C11433

(S)-3-amino-2-methylpropanoate

C7841

adenosine 2',3'-cyclic monophosphate

C7645

guanosine 2',3'-cyclic monophosphate

C7757

ADP

C7844

ATP

C7783

dATP

C7745

GTP

C7751

dGTP

C7795

GDP

C10288

adenylo-succinate

C7741

IMP

C7811

XMP

C7813

2'-deoxyadenosine

C7848

2'-deoxyguanosine

C7785

hypoxanthine

C7755

2'-deoxyinosine

C11254

5-chloro-5-deoxyribose 1-phosphate

C5546

5'-chloro-5'-deoxyadenosine

C7823

dADP

C7807

dGDP

C7809

AMP

C7759

ITP

C7817

IDP

C7749

dITP

C7747

dIDP

C7827

GMP

C7653

guanosine 3'-monophosphate

C7641

adenosine 3'-monophosphate

C10266

ppGpp

C10267

pppGpp

C7652

cyclic-AMP

C7840

dGMP

C7743

dAMP

C5485

1-(5-phospho-β-D-ribosyl)-ATP

C5489

1-(5-phospho-β-D-ribosyl)-AMP

C5552

5'-deoxyadenosine

C2151

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

C10263

ADP-α-D-glucose

C1009

GDP-α-D-mannose

C1015

GDP-α-D-glucose

C8423

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C10343

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C1939

dTDP-α-D-glucose

C7824

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

C7808

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

C8666

UDP-α-D-galactose

C7780

UDP-α-D-glucose

C7742

UDP-N-acetyl-α-D-muramoyl-L-alanine

C7822

UDP-N-acetyl-α-D-muramate

C7734

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

C7790

UDP-N-acetyl-α-D-mannosamine

C7444

UDP-N-acetyl-α-D-glucosamine

C5150

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

C5094

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C5090

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C5848

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C9454

adenine

C9455

guanine

C8739

uracil

C10601

thymine

C9540

preQ1

C6462

uridine 3'-monophosphate

C6460

cytidine-3'-monophosphate

C8750

cytidine 2',3'-cyclic monophosphate

C8747

uridine 2'3'-cyclic monophosphate

C8770

dUMP

C8744

dTMP

C8755

dCMP

C8733

dCDP

C8752

dUDP

C8720

dTDP

C8772

dCTP

C8724

dUTP

C8764

dTTP

C8732

CDP

C8714

UDP

C4243

β-nicotinamide D-ribonucleotide

C8761

CTP

C8760

UTP

C2241

UMP

C2245

CMP

C4020

NAD+

C4018

NADP+

C14500

NADH

C14497

NADPH

C2527

2'-deoxyuridine

C2519

thymidine

C2523

2'-deoxycytidine

C15088

adenosine

C15091

inosine

C15085

guanosine

C15094

xanthosine

C2706

uridine

C2702

cytidine

C7306

5'-deoxy-5'-fluoroadenosine

C11485

D-gluconate

C4086

1-(β-D ribofuranosyl)nicotinamide

C4068

5-dehydro-4-deoxy-D-glucuronate

C11619

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

C11627

3'-ketolactose

C13376

lotaustralin

C10334

arbutin-6-phosphate

C10331

salicin 6-phosphate

C8669

methyl β-D-glucoside 6-phosphate

C13426

taxiphyllin

C13392

linamarin

C13380

linustatin

C13404

neolinustatin

C10338

5-phospho-α-D-ribose 1-diphosphate

C10350

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

C10340

D-erythrose 4-phosphate

C15289

D-sedoheptulose 7-phosphate

C10356

4-phospho-D-erythronate

C8815

α-D-galactose 1-phosphate

C8811

α-D-glucopyranose 1-phosphate

C8813

α-D-mannose 1-phosphate

C3186

N-acetyl-α-D-glucosamine 1-phosphate

C2082

β-D-fructofuranose 1-phosphate

C2129

β-D-glucopyranose 1-phosphate

C6265

keto-L-sorbose 1-phosphate

C2115

α-D-galactose 6-phosphate

C2116

β-D-galactose 6-phosphate

C10325

L-ascorbate 6-phosphate

C2989

β-D-fructofuranose 6-phosphate

C15303

D-fructose 6-phosphate

C10326

β-D-fructose 1,6-bisphosphate

C10323

D-tagatofuranose 6-phosphate

C10324

D-tagatofuranose 1,6-bisphosphate

C2123

β-D-glucose 6-phosphate

C2125

α-D-glucose 6-phosphate

C6717

α-D-mannopyranose 6-phosphate

C6719

β-D-mannopyranose 6-phosphate

C2057

α-D-ribose-1-phosphate

C7314

5-fluoro-5-deoxy-D-ribose 1-phosphate

C2056

2-deoxy-α-D-ribose 1-phosphate

C8704

D-xylulose 5-phosphate

C8701

L-xylulose 5-phosphate

C8708

1-deoxy-D-xylulose 5-phosphate

C8700

aldehydo-D-arabinose 5-phosphate

C6715

aldehydo-D-ribose 5-phosphate

C6709

β-D-ribose 5-phosphate

C6711

α-D-ribose 5-phosphate

C10604

D-ribulose 5-phosphate

C10607

L-ribulose 5-phosphate

C5615

D-glyceraldehyde 3-phosphate

C6671

N,N'-diacetylchitobiose 6'-phosphate

C6669

N-monoacetylchitobiose 6'-phosphate

C6673

sucrose 6F-phosphate

C6551

α-lactose 6'-phosphate

C6579

β-D-cellobiose 6'-phosphate

C3137

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C3138

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

C10372

a peptidoglycan dimer (S. aureus)

C10379

a peptidoglycan dimer (E. faeciums)

C10370

a peptidoglycan dimer (E. faecium, tetrapeptide)

C10374

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

C10362

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

C10381

a peptidoglycan dimer (mycobacteria)

C5529

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

C3120

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C3132

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)5-D-alanyl-D-alanine

C3130

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

C3127

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

C3122

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C3131

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C3135

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-D-alanine

C3124

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanine

C361

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

C13230

a peptidoglycan dimer (meso-diaminopimelate containing)

C10383

a peptidoglycan with L,D cross-links (mycobacteria)

C10364

a peptidoglycan with D,D cross-links (mycobacteria)

C14591

a peptidoglycan with D,D cross-link (S. aureus)

C14587

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

C14595

a peptidoglycan tetramer with an L,D cross-link (Enterococcus faecium)

C8835

β-D-fructofuranose

C2858

glycolaldehyde

C2065

aldehydo-D-ribose

C2062

β-D-ribofuranose

C2061

α-D-ribofuranose

C2109

α-D-galactopyranose

C2108

β-D-galactopyranose

C7085

β-D-glucopyranose

C7087

α-D-glucopyranose

C9494

D-glyceraldehyde

C5533

L-glyceraldehyde

C2143

D-xylulose

C15288

N-acetylmuramate

C9477

N-acetyl-α-D-muramoyl-L-alanine(1-)

C13570

N-acetyl-β-D-mannosamine

C14477

N-acetyl-α-D-galactosamine

C5286

N-acetyl-β-D-glucosamine

C4960

N-acetyl-β-neuraminate

C3731

glycerol

C3673

D-mannitol 1-phosphate

C3672

D-sorbitol 6-phosphate

C6555

galactitol

C3694

XXXG xyloglucan oligosaccharide

C6917

β-D-cellobiose

C10688

maltotriose

C10693

sucrose

C10694

melibiose

C10754

allolactose

C6176

α-maltose

C6821

α-lactose

C10689

maltotetraose

C10690

maltopentaose

C10691

maltohexaose

C10692

maltoheptaose

C6899

stachyose

C5727

raffinose

C3685

XLLG xyloglucan oligosaccharide

C3687

XLXG xyloglucan oligosaccharide

C3689

XXLG xyloglucan oligosaccharide

C10621

4-methylumbelliferone

C4655

coumarin

C4615

scopoletin

C10966

all-trans-retinol

C3727

all-trans-retinyl palmitate

C9304

trans,octacis-decaprenyl phosphate

C9075

mono-trans,octa-cis-decaprenyl diphosphate

C6262

(3S)-linalool

C6261

(3R)-linalool

C8321

geranyl diphosphate

C9625

vanillylamine

C5119

4-cis-undecenoyl-CoA

C5121

6-cis, 3-oxo-tridecenoyl-CoA

C5113

4-trans-undecenoyl-CoA

C5114

6-trans-3-oxo-tridecenoyl-CoA

C5125

2-trans-nonenoyl-CoA

C5111

4-trans-3-oxo-undecenoyl-CoA

C5098

(3Z,5E)-dodeca-3,5-dienoyl-CoA

C5100

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

C5084

(3E)-dec-3-enoyl-CoA

C5088

(5E)-3-oxo-dodec-5-enoyl-CoA

C10554

1,2-dibutyrin

C10569

tributyrin

C8322

di-trans,octa-cis-undecaprenyl phosphate

C1813

di-trans,octa-cis-undecaprenyl diphosphate

C5378

geranylgeranyl diphosphate

C5382

all-trans-heptaprenyl diphosphate

C5383

all-trans-octaprenyl diphosphate

C3522

1-18:1-2-18:1-phosphatidylethanolamine

C4334

1-oleoyl-2-palmitoyl-phosphatidylglycerol

C5904

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

C3117

dioleoyl phosphatidate

C10387

1,2-dipalmitoyl-sn-glycero-3-phosphocholine

C5639

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

C2750

1-palmitoyl-sn-glycero-3-phosphocholine

C2765

1-oleoyl-2-lyso-glycerone phosphate

C6241

1-oleoyl-sn-glycerol 3-phosphate

C10527

myo-inositol

C10535

scyllo-inositol

C10534

1D-chiro-inositol

C10525

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

C10522

scyllo-inosose

C10519

1-keto-D-chiro-inositol

C13573

1D-myo-inositol 3-monophosphate

C13584

1D-myo-inositol 4-monophosphate

C13580

1D-myo-inositol 5-monophosphate

C13588

1D-myo-inositol 6-monophosphate

C13576

1D-myo-inositol 1-monophosphate

C13592

1D-myo-inositol 2-monophosphate

C2903

hydroquinone

C2758

3,4-dihydroxyphenylglycolaldehyde

C2763

3,4-dihydroxyphenylglycol

C11421

protocatechuate

C11409

2,3-dihydroxybenzoate

C3450

ethanol

C3447

propan-1-ol

C14807

phytol

C3449

butan-1-ol

C3448

methanol

C6090

methylglyoxal

C3641

(4-hydroxyphenyl)acetaldehyde

C3647

phenylacetaldehyde

C14804

phytenal

C6246

(S)-lactaldehyde

C3500

acetaldehyde

C3523

1-propanal

C3494

isobutanal

C3485

butan-1-al

C3483

formaldehyde

C10060

(R)-acetoin

C2040

diacetyl

C2028

acetone

C5702

a coenzyme-A group

C3308

pyruvate

C3351

glyoxylate

C3301

2-oxoglutarate

C3257

2-oxobutanoate

C3086

4-(methylsulfanyl)-2-oxobutanoate

C3345

3-phenyl-2-oxopropanoate

C3315

3-(4-hydroxyphenyl)pyruvate

C11429

salicylate

C8974

4-aminobenzoate

C11517

acetate

C11515

L-carnitine

C11481

orotate

C11482

(R)-pantoate

C11503

5-deoxy-D-glucuronate

C4985

(S)-1-pyrroline-5-carboxylate

C3383

palmitate

C3418

butanoate

C3409

octanoate

C3412

decanoate

C3387

stearate

C10590

α-linolenate

C13210

oleate

C10572

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

C6379

linoleate

C13266

(15Z)-tetracosenoate

C13260

phytenate

C6371

3-oxoadipate

C3421

formate

C3420

propanoate

C6185

(R)-lactate

C6186

(S)-lactate

C11476

(R)-glycerate

C8534

cis-aconitate

C8536

3-carboxy-cis,cis-muconate

C8531

D-threo-isocitrate

C3316

(3E)-2-oxohex-3-enedioate

C8950

chorismate

C6443

fumarate

C6442

succinate

C2802

(S)-malate

C6697

Gro-P-ManNAc-GlcNAc-PP-undecaprenol

C7139

4-tyrosol

C7033

6-hydroxy-2-cyclohexen-one-carboxylate

C6908

salicyl-6-hydroxy-2-cyclohexene-on-oyl

C3093

urate

C2569

coumarinate

C6043

4-methylphenol

C1867

3-demethylubiquinol-8

C1863

demethylmenaquinol-8

C1860

demethylmenaquinol-7

C1680

menaquinol-8

C1672

menaquinol-7

C5543

ubiquinol-8

C8413

indole

C7694

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

C8490

3-methoxy-4-hydroxyphenylglycol

C13422

hydrogen cyanide

C13354

preQ0

C13330

(2R)-2-hydroxy-2-methylbutanenitrile

C4190

2-hydroxy-2-methylpropanenitrile

C12680

(7,8-dihydropterin-6-yl)methyl diphosphate

C10609

7,8-dihydropteroate

C7134

tetrahydropteroyl tri-L-glutamate

C7129

5,6,7,8-tetrahydrofolate

C8566

5-methyltetrahydropteroyl tri-L-glutamate

C8565

5-methyltetrahydropteroyl mono-L-glutamate

C414

10-formyl-tetrahydrofolate mono-L-glutamate

C6250

5,10-methylenetetrahydropteroyl mono-L-glutamate

C4599

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

C10597

7,8-dihydrofolate monoglutamate

C10595

N10-formyldihydrofolate

C10988

riboflavin

C10053

FAD

C10052

FMN

C15044

reduced riboflavin

C10049

FMNH2

C10050

FADH2

C8751

aminomethylpyrimidine

C8727

formylaminopyrimidine

C9874

cob(I)alamin

C5221

adenosylcobalamin

C10994

thiamine

C10982

nicotinate

C10996

nicotinamide

C4214

pyridoxine 5'-phosphate

C4208

pyridoxine

C4188

pyridoxamine 5'-phosphate

C4216

pyridoxamine

C4210

pyridoxal 5'-phosphate

C4200

pyridoxal

C10614

coenzyme A

C10611

(R)-lipoate

C5394

(R)-NADHX

C5392

(S)-NADHX

C11516

glycine betaine

C2598

D-glucono-1,5-lactone

C5298

acetyl-CoA

C4981

CoA-disulfide

C4901

succinyl-CoA

C4922

isobutanoyl-CoA

C4937

3'-dephospho-CoA

C5313

2-methylbutanoyl-CoA

C5314

2-methylacetoacetyl-CoA

C5276

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

C5275

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

C5270

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

C5268

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

C5263

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

C5260

(+)-7-epi-jasmonoyl-CoA

C5035

4-hydroxybenzoyl-CoA

C5311

(S)-3-hydroxy-3-methylglutaryl-CoA

C5304

(3S)-citryl-CoA

C4913

malonyl-CoA

C5186

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

C5182

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

C4915

α-linolenoyl-CoA

C5056

linoleoyl-CoA

C4911

methylacrylyl-CoA

C5315

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

C5285

(E)-2-methylcrotonoyl-CoA

C4933

formyl-CoA

C4907

oxalyl-CoA

C11197

(S)-3-hydroxy-isobutanoyl-CoA

C5635

oleoyl-CoA

C6079

3-oxo-myristoyl-CoA

C6074

3-oxo-(5Z)-tetradecenoyl-CoA

C6200

3-oxohexanoyl-CoA

C6198

3-oxodecanoyl-CoA

C6201

3-oxododecanoyl-CoA

C6197

3-oxooctanoyl-CoA

C2008

acetoacetyl-CoA

C2009

3-oxopentanoyl-CoA

C5892

palmitoyl-CoA

C5885

stearoyl-CoA

C2873

pristanoyl-CoA

C14677

octanoyl-CoA

C14674

lauroyl-CoA

C14697

decanoyl-CoA

C14662

hexanoyl-CoA

C1177

propanoyl-CoA

C1175

butanoyl-CoA

C7168

(Z)-15-tetracosenoyl-CoA

C10775

(S)-3-hydroxybutanoyl-CoA

C10774

(3R)-3-hydroxybutanoyl-CoA

C8353

(3Z)-dodec-3-enoyl-CoA

C7343

(S)-malyl-CoA

C11400

phytenoyl-CoA

C1337

crotonyl-CoA

C9096

(indol-3-yl)acetate

C9098

methyl (indol-3-yl)acetate

C6218

(+)-7-epi-jasmonate

C4796

3,22-dioxochol-4-en-24-oyl-CoA

C4490

3-oxo-4-pregnene-20-carboxyl-CoA

C4743

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

C4800

3α,7α,12β-trihydroxy-5β-cholan-24-oate

C6332

cholate

C6358

glycocholate

C6352

isocholate

C6306

3-dehydrocholate

C8043

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

C8014

phosphoribulosylformimino-AICAR-phosphate

C8025

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

C8033

5-amino-4-imidazolecarboxyamide

C8039

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

C11317

6-caprolactam

C7869

acetamide

C11220

glycerophosphoglycerol

C11219

glycerophosphoserine

C11222

sn-glycero-3-phosphoethanolamine

C2181

choline sulfate

C2179

choline

C3574

spermidine

C3548

putrescine

C6524

2-aminoprop-2-enoate

C6526

(2Z)-2-aminobut-2-enoate

C1689

trimethyl sulfonium

C7014

sulfate

C7022

selenide

C7024

thiosulfate

C7030

nitrate

C7036

hydrogencarbonate

C8958

superoxide

C6762

phosphonate

C6097

phosphate

C6093

diphosphate

C6094

triphosphate

C7006

chloride

C7864

Fe3+

C11009

Mg2+

C11019

Ca2+

C11021

Mn2+

C10999

Cd2+

C11005

Zn2+

C11011

Cu2+

C11023

Fe2+

C4326

Na+

C4320

H+

C4328

ammonium

C4606

S-(hydroxymethyl)glutathione

C4768

3-(methylsulfanyl)propanal

C4704

methionol

C4734

dimethyl sulfide

C4678

glutathione

C12637

3-sulfopyruvate

C12587

L-cysteate

C12581

taurine

C5759

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

C5750

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

C5753

4-methyl-5-(2-phosphooxyethyl)thiazole

C5744

5-(2-hydroxyethyl)-4-methylthiazole

C4644

S-sulfanylglutathione

C4658

2,4-dinitrophenyl-S-glutathione

C13114

1-chloro-2,4-dinitrobenzene

C6290

(S)-3-hydroxy-isobutanoate

C6317

5,10-methenyltetrahydrofolate mono-L-glutamate

C6763

(R)-methylmalonate-semialdehyde

C6741

(S)-methylmalonate-semialdehyde

C6617

N-acetyl-D-mannosamine 6-phosphate

C2017

α-D-glucosamine 6-phosphate

C2150

(2R)-2,3-dihydroxy-3-methylbutanoate

C6437

3-phospho-D-glyceroyl-phosphate

C6427

2,3-diphospho-D-glycerate

C6438

3-phospho-D-glycerate

C6425

2-phospho-D-glycerate

C8419

sn-glycerol 3-phosphate

C7121

oxygen

C7118

hydrogen sulfide

C7666

protoporphyrinogen IX

C7676

protoporphyrin IX

C7658

uroporphyrinogen-III

C6624

protoheme

C9807

adenosylcobinamide

C9869

cob(I)inamide

C9853

adenosyl-cob(III)yrinate a,c-diamide

C9823

cob(I)yrinate a,c-diamide