an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

(S)-2,3,4,5-tetrahydrodipicolinate

2-dehydropantoate

hydrogen selenide

O-acetyl-L-serine

4-methyl-2-oxopentanoate

3-methyl-2-oxobutanoate

2-amino-3-carboxymuconate-6-semialdehyde

(S)-3-methyl-2-oxopentanoate

4-amino-2-methyl-5-pyrimidinemethanol

α-D-glucosamine 1-phosphate

2-keto-D-gluconate

2,5-didehydro-D-gluconate

glycerone phosphate

(S)-2-acetolactate

2-phosphoglycolate

glycolate

aminoacetone

morphinone

succinate semialdehyde

orotidine 5'-phosphate

N-succinyl-L,L-2,6-diaminopimelate

poly(ribitol phosphate)

O-D-alanyl-poly(ribitol phosphate)

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

N¹-(5-phospho-β-D-ribosyl)glycinamide

thiamine phosphate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribosylamino)uracil

1-deoxy-L-glycero-tetrulose 4-phosphate

5-amino-6-(D-ribitylamino)uracil

3-phosphooxypyruvate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-phosphooxy-L-threonine

D-erythro-imidazole-glycerol-phosphate

imidazole acetol-phosphate

histidinal

L-histidinol phosphate

histidinol

1,3-propanediol

3-hydroxypropanal

carbamoyl phosphate

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

isopentenyl diphosphate

dihydroxyacetone

2-oxopent-4-enoate

(S)-4-hydroxy-2-oxopentanoate

4'-phosphopantetheine

2-deoxygluconate

3-dehydro-2-deoxy-D-gluconate

D-gluconate 6-phosphate

6-phospho D-glucono-1,5-lactone

acetyl phosphate

phosphoenolpyruvate

(lipoyl)adenylate

tartronate semialdehyde

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

2-succinylbenzoate

(R)-pantothenate

(R)-4'-phosphopantothenate

urea

O-ureido-L-homoserine

canavaninosuccinate

L-canavanine

L-arginino-succinate

glutathione disulfide

S-ribosyl-L-homocysteine

autoinducer 2

N-acetyl-D-muramate 6-phosphate

2-amino-2-deoxy-D-gluconate 6-phosphate

oxaloacetate

CO₂

2-phenylethanol

3-methylbutanol

3-methylbutanal

5-hydroxytryptophol

5-hydroxyindole acetaldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

isobutanol

2-methylbutanol

2-methylbutanal

indole-3-glycol

indole-3-glycol aldehyde

4-(γ-L-glutamylamino)butanoate

4-aminobutanoate

xanthine

acrylamide

acrylate

(indol-3-yl)acetamide

4-guanidinobutyramide

4-guanidinobutanoate

propionamide

H₂O

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

5-amino-6-(5-phospho-D-ribitylamino)uracil

2-iminoacetate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

isochorismate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

(S)-4-hydroxy-2-oxohexanoate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

oxalate

(R)-2,3-dihydroxy-3-methylpentanoate

3-dehydroshikimate

6-aminohexanoate

6-oxohexanoate

adipate

3,5-dihydro-4H-imidazol-4-one

4-aminoimidazole

5-aminoimidazole-4-carboxylate

5-ureidoimidazole-4-carboxylate

citrate

H₂

pseudouridine

2-dehydro-3-deoxy-D-gluconate 6-phosphate

acetoacetate

1,6-anhydro-N-acetyl-β-muramate

7-epicholate

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

quinolinate

3-dehydroquinate

carbon monoxide

ammonia

S-formylglutathione

dimethylamine

UDP-4-deoxy-4-formamido-β-L-arabinopyranose

4-deoxy-4-formamido-α-L-arabinopyranosyl ditrans,octacis-undecaprenyl phosphate

carbonic acid

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

1,4-dihydroxy-2-naphthoate

4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate

β-nicotinate D-ribonucleotide

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

N-succinyl-2-amino-6-ketopimelate

arsenite

4-pyridoxolactone

formamide

ethanolamine

(L-threonylcarbamoyl)adenylate

4-amino-4-deoxychorismate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

DNA without lesion

pseudouridine 5'-phosphate

P¹,P⁴-bis(5'-guanosyl) tetraphosphate

urea-1-carboxylate

3-carboxy-2,5-dihydro-5-oxofuran-2-acetate

2-oleoylglycerol

nicotinate adenine dinucleotide

3-keto-β-D-galactose

hydrogen peroxide

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

hydroxypyruvate

enol-phenylpyruvate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

5-hydroxyindole thiazolidine carboxylate

γ-L-glutamyl 5-phosphate

(R)-4'-phosphopantothenoyl-L-cysteine

(S)-dihydroorotate

prenyl diphosphate

(R)-mevalonate diphosphate

(R)-mevalonate

(R)-5-phosphomevalonate

6-aminohexanoate cyclic dimer

6-aminohexanoate linear dimer

2-(α-hydroxyethyl)thiamine diphosphate

thiamine diphosphate

S-acetyldihydrolipoamide

dihydrolipoamide

lipoamide

5-enolpyruvoyl-shikimate 3-phosphate

prephenate

shikimate

shikimate 3-phosphate

(S)-2-aceto-2-hydroxybutanoate

2-oxoadipate

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

indole-3-ethanol

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

1,4-dihydroxy-2-naphthoyl-CoA

3-methylbenzyl alcohol

3-methylbenzaldehyde

4-methylbenzyl alcohol

L-selenocystathionine

oxalosuccinate

(2S)-2-{[1-(R)-carboxyethyl]amino}pentanoate

5-methylcytosine

(2E,6E)-farnesyl diphosphate

L-homocysteine

4-methylphenol

hippurate

glycine betaine

choline

2-iminopropanoate

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

cadaverine

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

1-oleoyl-2-palmitoyl-phosphatidylglycerol

benzyl alcohol

myo-inositol

1D-myo-inositol 5-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 2-monophosphate

1D-myo-inositol 3-monophosphate

1D-myo-inositol 4-monophosphate

D-ononitol

D-galactosylononitol

galactinol

3,4-dihydroxyphenylglycol

3,4-dihydroxyphenylglycolaldehyde

protocatechuate

ethylene glycol

(R,R)-2,3-butanediol

glycerol

galactitol

(3R)-linalool

(3S)-linalool

ethanol

propan-1-ol

butan-1-ol

phytol

3α,7α,12β-trihydroxy-5β-cholan-24-oate

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

testosterone

androsterone

androst-4-ene-3,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

androsta-1,4-diene-3,17-dione

5α-androstane-3,17-dione

3-dehydrocholate

isocholate

glycocholate

cholate

(indol-3-yl)acetate

3-chlorobenzyl alcohol

3-chlorobenzaldehyde

acetamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

6-caprolactam

nicotinamide

L-α-amino-ε-keto-pimelate

L-2-aminoadipate

L-2-amino-3-oxobutanoate

L-selenomethionine

seleno-L-homocysteine

L-aspartyl-4-phosphate

S-methyl-L-methionine

N⁶,N⁶-dimethyl-L-arginine

N-formimino-glycine

N-carbamoyl-L-aspartate

N-acetyl-L-ornithine

N-acetyl-L-glutamate

3-phospho-L-serine

L-selenocysteine

L-leucine

L-isoleucine

L-valine

L-phenylalanine

glycine

L-alanine

L-proline

L-methionine

L-cysteine

L-threonine

L-lysine

L,L-diaminopimelate

L-tyrosine

L-cystathionine

L-histidine

L-serine

L-glutamine

L-ornithine

L-arginine

L-aspartate

L-asparagine

L-glutamate

L-norvaline

L-citrulline

S-sulfo-L-cysteine

L-homoserine

L-aspartate 4-semialdehyde

O-succinyl-L-homoserine

L-canaline

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

L-cystine

L-glutamate-5-semialdehyde

O-phospho-L-homoserine

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

β-alanine

(S)-3-amino-2-methylpropanoate

D-glutamate

D-alanine

D-aspartate

acetate

(R)-pantoate

orotate

L-carnitine

D-gluconate

(S)-1-pyrroline-5-carboxylate

chorismate

succinate

fumarate

(S)-malate

(R)-lactate

(S)-lactate

(R)-glycerate

pyruvate

formate

propanoate

butanoate

3-oxoadipate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

glyoxylate

2-oxoglutarate

2-oxobutanoate

4-aminobenzoate

benzoate

palmitate

cis-aconitate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

2-iminosuccinate

2-iminobutanoate

glycolaldehyde

β-D-galactopyranose

α-D-galactopyranose

β-D-glucopyranose

α-D-glucopyranose

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

L-glyceraldehyde

methylglyoxal

phytenal

acetaldehyde

isobutanal

1-propanal

butan-1-al

formaldehyde

phenylacetaldehyde

(4-hydroxyphenyl)acetaldehyde

4-methylbenzaldehyde

benzaldehyde

diacetyl

(R)-acetoin

6-methoxy-2-all-trans-octaprenyl-1,4-benzoquinone

3-methyl-6-methoxy-2-octaprenyl-1,4-benzoquinone

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

1-O-acetyl-α-maltose

3'-ketolactose

UDP-α-D-galactose

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

5-phospho-α-D-ribose 1-diphosphate

4-phospho-D-erythronate

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

α-D-galactose 1-phosphate

α-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-glucopyranose 1-phosphate

α-D-galactose 6-phosphate

β-D-galactose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

α-D-ribose-1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

D-ribulose 5-phosphate

L-ribulose 5-phosphate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-α-D-glucose

GDP-α-D-glucose

GDP-α-D-mannose

ADP-D-ribose

UDP-α-D-glucose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

sucrose 6^F-phosphate

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (mycobacteria)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with an L,D cross-link (Enterococcus faecium)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

D-glyceraldehyde 3-phosphate

β-D-fructofuranose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-glucosamine

L-ribulose

XXLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XLLG xyloglucan oligosaccharide

XXXG xyloglucan oligosaccharide

stachyose

maltotetraose

raffinose

maltotriose

maltoheptaose

maltohexaose

maltopentaose

α-maltose

melibiose

sucrose

α-lactose

D-glucono-1,5-lactone

succinyl-CoA

3'-dephospho-CoA

malonyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

acetyl-CoA

methylacrylyl-CoA

2-methylbutanoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

isobutanoyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

2-methylacetoacetyl-CoA

oxalyl-CoA

formyl-CoA

crotonyl-CoA

oleoyl-CoA

3-oxoadipyl-CoA

3-oxodecanoyl-CoA

3-oxooctanoyl-CoA

3-oxohexanoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

butanoyl-CoA

propanoyl-CoA

palmitoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

geranyl diphosphate

morphine

N-acetyl-L-glutaminyl-L-glutamine

N-acetyl-L-glutaminyl-L-glutamine amide

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

dioleoyl phosphatidate

1-oleoyl-2-lyso-glycerone phosphate

1-oleoyl-sn-glycerol 3-phosphate

di-trans,octa-cis-undecaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-octaprenyl diphosphate

di-trans,octa-cis-undecaprenyl phosphate

4-tyrosol

8-hydroxypurine

6,8-dihydroxypurine

urate

4-vinylguaiacol

3-methoxy-4-hydroxyphenylglycol

ferulate

(indol-3-yl)acetaldehyde

demethylmenaquinol-11

demethylmenaquinol-9

demethylmenaquinol-8

demethylmenaquinol-10

demethylmenaquinol-6

demethylmenaquinol-7

demethylmenaquinol-12

demethylmenaquinol-13

menaquinol-11

menaquinol-9

menaquinol-8

menaquinol-10

menaquinol-6

menaquinol-7

menaquinol-12

menaquinol-13

adenine

guanine

purine

hypoxanthine

dGMP

dAMP

dITP

dATP

dGTP

dADP

dGDP

dIDP

GTP

ATP

ITP

GDP

ADP

IDP

IMP

AMP

GMP

XMP

2'-deoxyguanosine

2'-deoxyadenosine

xanthosine

guanosine

adenosine

riboflavin

FMN

FAD

FADH₂

reduced riboflavin

FMNH₂

6,7-dimethyl-8-(1-D-ribityl)lumazine

7,8-dihydroneopterin 3'-phosphate

molybdopterin adenine dinucleotide

cyclic pyranopterin phosphate

molybdopterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate

7,8-dihydromonapterin

7,8-dihydroneopterin

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydroneopterin 3'-triphosphate

MoO₂-molybdopterin cofactor

7,8-dihydropteroate

7,8-dihydrofolate monoglutamate

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

uridine 2'3'-cyclic monophosphate

cytidine 2',3'-cyclic monophosphate

aminomethylpyrimidine

dTMP

dUMP

cytidine-3'-monophosphate

uridine 3'-monophosphate

UTP

uracil

CTP

dCDP

CDP

dUDP

UDP

formylaminopyrimidine

dCTP

dUTP

dTDP

dTTP

cytosine

dCMP

thymine

CMP

UMP

cytidine

uridine

thymidine

2'-deoxyuridine

2'-deoxycytidine

5-fluorouracil

adenosine 2',3'-cyclic monophosphate

guanosine 2',3'-cyclic monophosphate

guanosine 3'-monophosphate

adenosine 3'-monophosphate

adenylo-succinate

ppGpp

pppGpp

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

5'-deoxyadenosine

NADP⁺

NAD⁺

NADPH

NADH

β-nicotinamide D-ribonucleotide

5-fluorocytosine

DNA with lesion

adenosyl-cob(III)yrinate a,c-diamide

adenosylcobyrate

hydrogen cyanide

nitrous oxide

(Z,Z)-bilirubin-IX α

(Z,Z)-biliverdin-IX α

hydrogen sulfide

oxygen

sn-glycerol 3-phosphate

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

2-phospho-D-glycerate

3-phospho-D-glycerate

(2R)-2,3-dihydroxy-3-methylbutanoate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

nitric oxide

5,10-methenyltetrahydrofolate mono-L-glutamate

(S)-3-hydroxy-isobutanoate

(R)-lipoate

coenzyme A

(S)-NADHX

(R)-NADHX

thiamine

nicotinate

pyridoxamine

pyridoxamine 5'-phosphate

pyridoxine

pyridoxine 5'-phosphate

pyridoxal 5'-phosphate

pyridoxal

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

thiosulfate

nitrite

nitrate

hydrogensulfite

hydrogencarbonate

molybdate

phosphonate

phosphate

diphosphate

Cd²⁺

ammonium

H⁺

Na⁺

K⁺

S-(hydroxymethyl)glutathione

methionol

3-(methylsulfanyl)propanal

dimethyl sulfide

glutathione

(R)-S-lactoylglutathione

5-(2-hydroxyethyl)-4-methylthiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

L-cysteate

3-sulfopyruvate

thiocyanate