an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

CO₂

aminoacetone

3-phosphooxypyruvate

4-phosphooxy-L-threonine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

H₂O

5-enolpyruvoyl-shikimate 3-phosphate

(S)-3-methyl-2-oxopentanoate

4-methyl-2-oxopentanoate

3-methyl-2-oxobutanoate

L-arginino-succinate

canavaninosuccinate

O-ureido-L-homoserine

phosphoenolpyruvate

5-dehydro-D-gluconate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

6-phospho D-glucono-1,5-lactone

oxaloacetate

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

(2S)-2-isopropylmalate

succinate semialdehyde

(R)-2,3-dihydroxy-3-methylpentanoate

3-mercaptopyruvate

α-D-glucosamine 1-phosphate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

7,8-diaminopelargonate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

8-amino-7-oxononanoate

imidazole acetol-phosphate

D-erythro-imidazole-glycerol-phosphate

(E)-4-coumaroyl-CoA

2,3-didehydroadipyl-CoA

β-D-ribosylnicotinate

β-nicotinate D-ribonucleotide

(S)-dihydroorotate

5-aminolevulinate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

isopentenyl diphosphate

porphobilinogen

thiamine diphosphate

2-(α-hydroxyethyl)thiamine diphosphate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

(indol-3 yl)acetyl-CoA

(indol-3-yl)pyruvate

citrate

anthranilate

N-(5-phosphoribosyl)-anthranilate

γ-L-glutamyl 5-phosphate

enol-phenylpyruvate

ethylamine

N-isopropylammelide

hydroxyatrazine

glycerone phosphate

L-histidinol phosphate

N-acetyl-L-glutamate 5-semialdehyde

4-amino-4-deoxychorismate

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

3'-phosphoadenylyl-sulfate

N⁵-carboxyaminoimidazole ribonucleotide

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

prephenate

3-oxopropanoate

hydrogenobyrinate a,c-diamide

oxalosuccinate

xanthine

L-canavanine

carbamoyl phosphate

hydrogen peroxide

quinolinate

nicotinate adenine dinucleotide

(R)-4'-phosphopantothenoyl-L-cysteine

(R)-4'-phosphopantothenate

4'-phosphopantetheine

3-deoxy-D-arabino-heptulosonate 7-phosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

prenyl diphosphate

4-maleyl-acetoacetate

homogentisate

urocanate

4-imidazolone-5-propanoate

urea

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

(E)-2-benzylidenesuccinyl-CoA

3-oxo-3-phenylpropanoyl-CoA

3α,7α-dihydroxy-24-oxo-5β-cholestanoyl CoA

N-succinyl-2-amino-6-ketopimelate

(S)-2,3,4,5-tetrahydrodipicolinate

N-succinyl-L,L-2,6-diaminopimelate

4-hydroxy-2-nonenal

5-amino-6-(D-ribitylamino)uracil

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-ureidopropanoate

pregn-5-ene-3,20-dione

pregn-5-ene-3,20-dione-17-ol

5-androstene-3,17-dione

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

preuroporphyrinogen

3-dehydroshikimate

shikimate

coproporphyrinogen III

3-oxopristanoyl-CoA

4,8,12-trimethyltridecanoyl-CoA

3-deoxy-α-D-manno-2-octulosonate

acetoacetate

4-fumaryl-acetoacetate

carbon monoxide

2-protocatechuoylphloroglucinolcarboxylate

lipid IV_A

lipid A disaccharide (E. coli)

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

propionamide

(indol-3-yl)acetamide

4-guanidinobutanoate

4-guanidinobutyramide

acrylate

acrylamide

4-acetamidobutanoate

4-acetamidobutanal

N²-succinylglutamate

N²-succinyl-L-glutamate 5-semialdehyde

2-dehydropantoate

(R)-pantothenate

tartronate semialdehyde

hydroxypyruvate

glycolate

S-formylglutathione

carbonic acid

2-dehydro-3-deoxy-L-rhamnonate

(4S)-4-hydroxy-2-oxoheptanedioate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(4Z)-2-oxohept-4-enedioate

2-hydroxy-5-carboxymethylmuconate semialdehyde

5-carboxymethyl-2-hydroxymuconate

methylamine

histidinol

histidinal

trimethylamine N-oxide

trimethylamine

(4,5-dihydro-5-oxofuran-2-yl)-acetate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

phosphocholine

2,5-dioxopentanoate

benzoylsuccinyl-CoA

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

2-arylpropanoate

2-aryl-2-methylmalonate

S-Inosyl-L-homocysteine

urea-1-carboxylate

DNA without lesion

O-acetyl-L-serine

hydrogen selenide

ectoine

(2S)-4-acetamido-2-aminobutanoate

N-methylhydantoin

D-gluconate 6-phosphate

5-methylsalicylate

4-methylsalicylate

(2E)-3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)prop-2-enoate

3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)propanoate

3-phenylpropanoate

shikimate 3-phosphate

dimethylamine

2-oxovalerate

3-ethylmalate

(2S)-2-isopropyl-3-oxosuccinate

(2R,3S)-3-methylmalate

citraconate

acetyl phosphate

hypotaurine

2-phenylethanol

2-methylbutanal

2-methylbutanol

3-methylbutanal

3-methylbutanol

isobutanol

indole-3-glycol aldehyde

indole-3-glycol

3-methoxy-4-hydroxyphenylglycolaldehyde

5-hydroxyindole acetaldehyde

5-hydroxytryptophol

(S)-5-amino-3-oxohexanoate

2-dehydro-3-deoxy-D-galactonate 6-phosphate

2-dehydro-3-deoxy-D-galactonate

nigerose

4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate

cis,cis-muconate

(+)-muconolactone

muconolactone

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

1-deoxy-L-glycero-tetrulose 4-phosphate

α-ribazole 5'-phosphate

α-ribazole

5,6-dimethylbenzimidazole

(2-hydroxyphenyl)acetate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

thiamine phosphate

2-iminoacetate

dethiobiotin

pimeloyl-CoA

3-dehydroquinate

isoquinolin-2(1H)-one

isoquinoline

N-Formyl-L-kynurenine

3-hydroxyanthranilate

5-phospho-β-D-ribosylamine

orotidine 5'-phosphate

H₂

ethanolamine

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

1,6-anhydro-N-acetyl-β-muramate

propanoyl phosphate

N-acetyl-D-muramate 6-phosphate

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

N¹-(5-phospho-β-D-ribosyl)glycinamide

dimethylsulfoniopropanoate

2-C-methyl-D-erythritol 4-phosphate

lipid X

S-methyl-5'-thioadenosine

S-adenosyl 3-(methylsulfanyl)propylamine

pseudouridine 5'-phosphate

N-acetylglutamyl-phosphate

methylsalicylate

salicyl alcohol

5-(methylsulfanyl)-ribulose 1-phosphate

S-methyl-5-thio-α-D-ribose 1-phosphate

prephytoene diphosphate

γ-butyrobetaine

N-carbamoyl-D-phenylglycine

D-phenylhydantoin

7-carboxy-7-deazaguanine

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

(2E)-hexadecenal

palmitaldehyde

5-methylcytosine

4-aminobutanoate

4-trimethylammoniobutanal

methyl-1,4-benzoquinol

2-methyl-1,4-benzoquinone

glutathione disulfide

butyramide

3-deoxy-D-manno-octulosonate 8-phosphate

1,2-benzoquinone

trans-O-hydroxybenzylidenepyruvate

5-oxo-L-proline

oxalate

7,8-didemethyl-8-hydroxy-5-deazariboflavin

(2S)-lactyl-2-diphospho-5'-guanosine

hydrogenobyrinate

(R)-mandelate

(S)-mandelate

(S)-4-amino-5-oxopentanoate

4-(γ-L-glutamylamino)butanoate

4-(γ-L-glutamylamino)butanal

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

itaconate

4-methyl-3-oxoadipate

4-methyl-3-oxoadipate-enol-lactone

glutarate

(7R)-7-(4-carboxybutanamido)cephalosporanate

6-amino-2-oxohexanoate

(S)-2-amino-6-oxohexanoate

(S)-ureidoglycolate

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

(S)-5-hydroxyisourate

phosphonoacetate

ammonia

(5R)-5-benzyl-hydantoin

(5S)-5-benzyl-hydantoin

dimethyl sulfoxide

2-methyl-trans-aconitate

nicotine-1'-N-oxide

N,N-dimethylaniline-N-oxide

N,N-dimethylaniline

mercuriphenyl acetate

(R)-1-amino-2-propanol O-2-phosphate

dialurate

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

2-amino-3-carboxymuconate-6-semialdehyde

(salicyl)adenylate

3-maleylpyruvate

2-amino-5-oxocyclohex-1-enecarboxyl-CoA

N²-succinyl-L-arginine

N²-succinyl-L-ornithine

pseudouridine

6-oxocyclohex-1-ene-1-carbonyl-CoA

3-hydroxypimeloyl-CoA

3-oxopimeloyl-CoA

cyclohex-1,5-diene-1-carbonyl-CoA

6-hydroxycyclohex-1-ene-1-carbonyl-CoA

2-hydroxy-6-oxocyclohexane-1-carbonyl-CoA

4-amino-2-methyl-5-pyrimidinemethanol

creatinine

(2Z,4E)-2-hydroxy-6-oxonona-2,4-diene-1,9-dioate

3-(3-hydroxyphenyl)propanoate

3-(2,3-dihydroxyphenyl)propanoate

2-oxopent-4-enoate

(3E)-2-oxopent-3-enoate

(2E)-2-hydroxypenta-2,4-dienoate

2-maleylacetate

protoanemonin

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

L-arabinonate

2-dehydro-3-deoxy-L-arabinonate

L-arabinono-1,4-lactone

L-rhamnonate

L-rhamnono-1,4-lactone

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

crotonate

cyclohexane-1-carboxylate

cyclohexane-1-carbonyl-CoA

formamide

glutathioselenol

selenodiglutathione

isopropylamine

5-aminopentanoate

1-piperideine 6-carboxylate

1-piperideine-2-carboxylate

4-oxoglutaramate

1-pyrroline

bisorganyltrisulfane

5-hydroxyindole thiazolidine carboxylate

(2E,6E)-farnesyl diphosphate

pristanate

protoporphyrin IX

uroporphyrinogen-III

protoporphyrinogen IX

coproporphyrinogen I

uroporphyrinogen-I

protoheme

hydrogen cyanide

N₂

cob(I)alamin

adenosylcobalamin

cob(II)yrinate a,c-diamide

adenosylcobalamin 5'-phosphate

adenosylcobinamide-GDP

adenosylcobyrate

adenosyl-cob(III)yrinate a,c-diamide

cobalt-precorrin-6A

cobalt-precorrin-6B

cobyrinate

cob(II)yrinate c-monoamide

adenosyl-cobinamide phosphate

adenosylcobinamide

cob(I)inamide

cob(I)yrinate a,c-diamide

cobalt-precorrin-5A

cobalt-precorrin-4

cobalt-precorrin-5B

cobalt-precorrin-8

cobalt-precorrin-7

cobalt-sirohydrochlorin

cobalt-precorrin-3

cobalt-factor III

phosphonoacetaldehyde

(2-aminoethyl)phosphonate

ethylphosphate

phenylacetate

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal

(R)-4-hydroxymandelate

(S)-4-hydroxymandelate

2-iminobutanoate

2-iminosuccinate

2-iminopropanoate

L-homocysteine

4-methylphenol

L-cysteinylglycine

N-acetyl-L-glutaminyl-L-glutamine amide

N-acetyl-L-glutaminyl-L-glutamine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

hypoglycin B

L-kynurenine

L-α-amino-ε-keto-pimelate

glycine

L-isoleucine

L-leucine

L-valine

L-tryptophan

L-alanine

L-proline

L-phenylalanine

L-selenocysteine

L-methionine

L-cysteine

L-threonine

L-glutamate

L-aspartate

L-aspartyl-4-phosphate

L-serine

L-2,4-diaminobutanoate

L-glutamine

L-ornithine

L-arginine

L-lysine

L-cystathionine

L-histidine

L-asparagine

L,L-diaminopimelate

N^ω-hydroxy-L-arginine

L-tyrosine

L-isoglutamine

N-carbamoyl-L-aspartate

N⁶-acetyl-N⁶-hydroxy-L-lysine

N-formyl-L-glutamate

formyl-L-isoglutamine

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-formimino-L-glutamate

N⁶,N⁶-dimethyl-L-arginine

L-citrulline

S-adenosyl-L-homocysteine

L-aspartate 4-semialdehyde

O-phospho-L-homoserine

S-adenosyl-L-methionine

L-glutamate-5-semialdehyde

L-cystine

L-homoserine

hypoglycin A

L-canaline

S-sulfo-L-cysteine

1-aminocyclopropane-1-carboxylate

O-succinyl-L-homoserine

L-4-hydroxyglutamate semialdehyde

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

L-2-amino-3-oxobutanoate

S-sulfanyl-L-cysteine

L-saccharopine

3-phospho-L-serine

O-acetyl-L-homoserine

cis-4-hydroxy-D-proline

trans-4-hydroxy-L-proline

3-hydroxy-L-kynurenine

N⁶-hydroxy-L-lysine

N-carbamoylglycine

N-acetyl-L-methionine

N-acetyl-L-glutamate

sarcosine

S-methyl-L-methionine

D-glutamate

D-alanine

D-aspartate

D-lysine

N-carbamoylsarcosine

creatine

β-alanine

(S)-3-amino-2-methylpropanoate

(R)-3-amino-2-methylpropanoate

guanosine 2',3'-cyclic monophosphate

adenosine 2',3'-cyclic monophosphate

AMP

ATP

ADP

XMP

IMP

GMP

dATP

dADP

dGTP

dGDP

GTP

GDP

ITP

IDP

dITP

dIDP

hypoxanthine

adenylo-succinate

1-(5-phospho-β-D-ribosyl)-ATP

2'-deoxyadenosine

2'-deoxyguanosine

2'-deoxyinosine

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

5'-deoxyadenosine

dGMP

dAMP

cyclic-GMP

cyclic-AMP

1-(5-phospho-β-D-ribosyl)-AMP

adenosine 3'-monophosphate

guanosine 3'-monophosphate

ppGpp

pppGpp

isoguanine

8-oxo-dGTP

8-oxo-GTP

5,6-dihydrouracil

5,6-dihydrothymine

CDP-choline

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

GDP-α-D-glucose

GDP-α-D-mannose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-α-D-glucose

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-α-D-glucose

UDP-α-D-galactose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

guanine

adenine

uracil

thymine

cytosine

preQ₁

cytidine-3'-monophosphate

uridine 3'-monophosphate

NAD⁺

NADP⁺

NADH

NADPH

cyclic di-3',5'-guanylate

uridine 2'3'-cyclic monophosphate

cytidine 2',3'-cyclic monophosphate

dTMP

dUMP

dCMP

dCDP

dTDP

dUDP

dUTP

dCTP

dTTP

CDP

UDP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

reduced β-nicotinamide D-ribonucleotide

UTP

CTP

UMP

CMP

5-hydroxy-CMP

5-hydroxy-CTP

2-hydroxy-dATP

thymidine

2'-deoxyuridine

2'-deoxycytidine

adenosine

xanthosine

inosine

guanosine

uridine

cytidine

5-fluorouracil

5'-deoxy-5'-fluoroadenosine

5-fluorocytosine

D-gluconate

L-idonate

1-(β-D ribofuranosyl)nicotinamide

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

1-O-acetyl-α-maltose

D-galactosylononitol

galactinol

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

5-phospho-α-D-ribose 1-diphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

4-phospho-D-erythronate

α-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-ribose-1-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

2-deoxy-α-D-ribose 1-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

sucrose 6^F-phosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (S. aureus)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (mycobacteria)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

β-D-fructofuranose

keto-D-fructose

keto-L-sorbose

glycolaldehyde

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

β-D-mannopyranose

β-D-glucopyranose

α-D-glucopyranose

aldehydo-D-mannose

D-glyceraldehyde

L-glyceraldehyde

D-xylulose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-glucosamine

glycerol

D-sorbitol

D-mannitol

α-Kdo-(2→6)-lipid IV_A

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

sucrose

salicylaldehyde

all-trans-retinal

all-trans-retinol

all-trans-retinoate

all-trans-retinyl palmitate

3-oxo-24-ethyl-cholest-5-ene

sitosterol

3-oxo-24-ethyl-cholest-4-ene

3-oxo-24-ethyl-26-hydroxy-cholest-4-ene

3-oxo-24-ethyl-cholest-4-en-26-oyl-CoA

3-oxo-24-ethyl-cholest-4,24-dien-26-oyl-CoA

3-oxo-24-(isopropanoyl)-cholest-4,24-dien-26-oyl-CoA

3,24-dioxo-cholest-4-en-26-oate

3-oxo-24-ethyl-cholest-4-en-26-oate

3-oxo-24-ethyl-26-al-cholest-4-ene

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

geranial

(3S)-linalool

(3R)-linalool

geranyl diphosphate

apo-4'-lycopenal

all-trans-phytoene

15-cis-phytoene

apo-4'-lycopenoate

(7R)-7 aminocephalosporanate

aerobactin

N¹-citryl-N⁶-acetyl-N⁶-hydroxy-L-lysine

betanidin quinone

betanidin

(S)-nicotine

(3R)-hydroxy-nonanoyl-CoA

2-trans-nonenoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3E)-dec-3-enoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

4-trans-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

4-cis-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

(3E)-undec-3-enoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

(3E)-tetradec-3-enoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

geranylgeranyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-nonaprenyl diphosphate

3-decaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-hexaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

1-oleoyl-2-palmitoyl-phosphatidylglycerol

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

dioleoyl phosphatidate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-oleoyl-2-lyso-glycerone phosphate

1-oleoyl-sn-glycerol 3-phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

myo-inositol

1D-myo-inositol 1-monophosphate

1D-myo-inositol 3-monophosphate

D-ononitol

protocatechuate

3,4-dihydroxyphenylacetate

4-chlorocatechol

4-methylcatechol

catechol

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylglycol

1-octanol

ethanol

phytol

propan-1-ol

butan-1-ol

methanol

fluoroacetaldehyde

methylglyoxal

phenylacetaldehyde

(4-hydroxyphenyl)acetaldehyde

benzaldehyde

phytenal

(S)-lactaldehyde

formaldehyde

acetaldehyde

1-octanal

isobutanal

1-propanal

1-heptanal

butan-1-al

menadione

(2Z)-3-(3,4-dioxocyclohexa-1,5-dien-1-yl)prop-2-enoate

diacetyl

a coenzyme-A group

geranate

3-(methylsulfanyl)propanoate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

pyruvate

2-oxoglutarate

2-oxobutanoate

glyoxylate

4-(methylsulfanyl)-2-oxobutanoate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

salicylate

trans-cinnamate

4-aminobenzoate

benzoate

acetate

(R)-pantoate

orotate

L-carnitine

allantoate

gentisate

fluoroacetate

(S)-1-pyrroline-5-carboxylate

palmitate

decanoate

octanoate

heptanoate

butanoate

stearate

linoleate

oleate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

α-linolenate

γ-linolenate

dinor-12-oxo-phytodienoate

8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate

(3E,5Z)-tetradecadienoate

di-homo-γ-linolenate

phytenate

(15Z)-tetracosenoate

3-oxoadipate

formate

propanoate

(S)-lactate

(R)-lactate

(2R,3S)-2-methylisocitrate

(R)-glycerate

(R)-3-hydroxybutanoate

cis-aconitate

3-carboxy-cis,cis-muconate

(2S,3S)-2-methylcitrate

cis-2-methylaconitate

D-threo-isocitrate

3-(carbamoylamino)-2-methylpropanoate

chorismate

(3E)-2-oxohex-3-enedioate

(2Z,4E,7E)-2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioate

succinate

fumarate

(S)-malate

4-hydroxybenzoate

4-tyrosol

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

urate

benzene

cyanuric acid

2,3-dihydroxy-trans-cinnamate

3-hydroxy-trans-cinnamate

quercetin

6,7-dehydrobaicalein

baicalein

cis-caffeate

5-chlorosalicylate

4-chlorosalicylate

2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

2-[hydroperoxy(4-hydroxyphenyl)methyl]-6-hydroxy-1-benzofuran-3-one

6-hydroxy-2-[hydroxy-(4-hydroxyphenyl)methyl]-1-benzofuran-3-one

6-hydroxy-2-(6-oxo-1-oxaspiro[2.5]octa-4,7-dien-2-yl)-1-benzofuran-3-one

menadiol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

3-demethylubiquinol-8

3-demethylubiquinol-9

3-demethylubiquinol-7

3-demethylubiquinol-10

demethylmenaquinol-8

menaquinol-8

ubiquinol-8

ubiquinol-9

ubiquinol-7

ubiquinol-10

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

3-methoxy-4-hydroxyphenylglycol

atrazine

preQ₀

propionitrile

acrylonitrile

(indole-3-yl)acetonitrile

3-cyanopyridine

n-butyronitrile

2-hydroxychromene-2-carboxylate

7,8-dihydrolumazine

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

6-carboxy-5,6,7,8-tetrahydropterin

7,8-dihydroneopterin 2',3'-cyclic phosphate

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydromonapterin

7,8-dihydroneopterin

7,8-dihydropterin

molybdopterin

cyclic pyranopterin phosphate

7,8-dihydroneopterin 3'-phosphate

molybdopterin adenine dinucleotide

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

7,8-dihydropteroate

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

riboflavin

FMN

FAD

FMNH₂

reduced riboflavin

FADH₂

6,7-dimethyl-8-(1-D-ribityl)lumazine

hydantoin

sirohydrochlorin

precorrin-3A

precorrin-2

precorrin-4

precorrin-3B

precorrin-8x

precorrin-7

precorrin-6B

precorrin-5

precorrin-6A

precorrin-1

nicotinate

nicotinamide

thiamine

pyridoxal 5'-phosphate

pyridoxine 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxine

pyridoxal

pyridoxamine

coenzyme A

oxidized coenzyme F₄₂₀-0

(R)-NADHX

(S)-NADHX

glycine betaine

D-glucono-1,5-lactone

acetyl-CoA

2-methylacetoacetyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

succinyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

(3S)-hydroxyadipyl-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

(E)-2-methylcrotonoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-hydroxyisovaleryl-CoA

malonyl-CoA

(2E,5Z)-tetradecenoyl-CoA

4-hydroxybenzoyl-CoA

(+)-7-epi-jasmonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

benzoyl-CoA

chenodeoxycholoyl-CoA

choloyl-CoA

3α,7α,12α-trihydroxy-24-oxo-5-β-cholestanoyl CoA

crotonobetainyl-CoA

L-carnitinyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

3'-dephospho-CoA

(2R,3S)-β-methylmalyl-CoA

(S)-3-aminobutanoyl-CoA

3-methylcrotonyl-CoA

isovaleryl-CoA

3-methylglutaconyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

isobutanoyl-CoA

dihomo γ-linolenoyl-CoA

anthraniloyl-CoA

gentisyl-CoA

salicyl-CoA

phenylacetyl-CoA

itaconyl-CoA

glutaryl-CoA

2-methylbutanoyl-CoA

(E)-glutaconyl-CoA

γ-butyrobetainyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

3-oxoadipyl-CoA

3-oxo-myristoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-palmitoyl-CoA

3-oxooctadecanoyl-CoA

3-oxodecanoyl-CoA

3-oxohexanoyl-CoA

3-oxooctanoyl-CoA

3-oxododecanoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

hexadecanedioyl-CoA

palmitoyl-CoA

stearoyl-CoA

pristanoyl-CoA

2-hydroxyphytanoyl-CoA

phytanoyl-CoA

hexanoyl-CoA

decanoyl-CoA

lauroyl-CoA

octanoyl-CoA

propanoyl-CoA

butanoyl-CoA

(Z)-15-tetracosenoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(3R)-3-hydroxypentanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

(S)-malyl-CoA

phytenoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(2E)-octadec-2-enoyl-CoA

crotonyl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

pregnenolone

ethene

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

(+)-7-epi-jasmonate

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

(25S)-3-oxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

3-oxocholest-4,24-dien-26-oyl-CoA

3-oxochol-4-en-24-oyl-CoA

3-oxochol-4,22-dien-24-oyl-CoA

22-hydroxy-3-oxochol-4-en-24-oyl-CoA

3-oxo-4,17-pregnadiene-20-carboxyl-CoA

17-hydroxy-3-oxo-4-pregnane-20-carboxyl-CoA

(25S)-26-oxocholest-4-en-3-one

(25S)-26-hydroxycholest-4-en-3-one

cholest-4-en-3-one

17-α-hydroxypregnenolone

cholest-5-en-3-one

cholesterol

3-β-hydroxyandrost-5-en-17-one

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

(S)-(+)-allantoin

acetamide

2-chloroacetate

3-chloro-cis,cis-muconate

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

sn-glycero-3-phosphocholine

betaine aldehyde hydrate

choline sulfate

choline

betaine aldehyde

agmatine

cadaverine

putrescine

spermidine

4-aminobutanal

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

selenide

thiosulfate

OH^-

nitrite

nitrate

hydrogensulfite

hydrogencarbonate

molybdate

superoxide

phosphate

diphosphate

triphosphate

chloride

Fe³⁺

Hg²⁺

Co²⁺

Fe²⁺

H⁺

ammonium

S-(hydroxymethyl)glutathione

3-(methylsulfanyl)propanal

methionol

dimethyl sulfide

glutathione

(R)-S-lactoylglutathione

3-sulfopyruvate

L-cysteate

sulfoacetaldehyde

2-sulfinoacetaldehyde

taurine

4-methyl-5-(2-phosphooxyethyl)thiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

5-(2-hydroxyethyl)-4-methylthiazole

thiocyanate

methanethiol

S-sulfanylglutathione

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

nitric oxide

hydroxyl radical

2-methoxy-6-(all-trans-octaprenyl)phenol

2-octaprenylphenol

(S)-3-hydroxy-isobutanoate

3-(all-trans-octaprenyl)benzene-1,2-diol

5,10-methenyltetrahydrofolate mono-L-glutamate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

(R)-citramalate

(S)-ureidoglycine

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(2R)-2,3-dihydroxy-3-methylbutanoate

(2S)-2-phospholactate

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

2-phospho-D-glycerate

3-phospho-D-glycerate

sn-glycerol 3-phosphate

S⁰

hydrogen sulfide

oxygen

Hg⁰