an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

CO₂

oxalosuccinate

H₂O

imidazole acetol-phosphate

D-erythro-imidazole-glycerol-phosphate

porphobilinogen

5-aminolevulinate

3-dehydroshikimate

shikimate

N-(5-phosphoribosyl)-anthranilate

succinate semialdehyde

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

5-androstene-3,17-dione

pregn-5-ene-3,20-dione-17-ol

pregn-5-ene-3,20-dione

coproporphyrinogen III

α-D-galactosyl-diphosphoundecaprenol

thiamine diphosphate

2-(α-hydroxyethyl)thiamine diphosphate

prenyl diphosphate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

N¹-(5-phospho-β-D-ribosyl)glycinamide

phosphoenolpyruvate

2-oxopent-4-enoate

(3E)-2-oxopent-3-enoate

(2E)-2-hydroxypenta-2,4-dienoate

(2Z,4E)-2-hydroxy-6-oxohexa-2,4-dienoate

(2E,4Z)-2-hydroxy-6-oxohepta-2,4-dienoate

urea

citrate

acetyl phosphate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

nigerose

O-acetyl-L-serine

hydrogen selenide

estrone 3-sulfate

3-β-hydroxyandrost-5-en-17-one 3-sulfate

4-methyl-2-oxopentanoate

(S)-3-methyl-2-oxopentanoate

3-methyl-2-oxobutanoate

carbon monoxide

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

2-succinylbenzoate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

methyl-1,4-benzoquinol

2-methyl-1,4-benzoquinone

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

hydroxylamine

H₂

hydrogen peroxide

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

2-oleoylglycerol

N-succinyl-2-amino-6-ketopimelate

N-succinyl-L,L-2,6-diaminopimelate

creatinine

isopentenyl diphosphate

orotidine 5'-phosphate

2-dehydropantoate

L-arogenate

(2S)-2-isopropylmalate

O-ureido-L-homoserine

carbamoyl phosphate

thiamine phosphate

preuroporphyrinogen

N-acetyl-D-muramate 6-phosphate

1,6-anhydro-N-acetyl-β-muramate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

(2R,3S)-3-methylmalate

citraconate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

4-aminobutanoate

DNA without lesion

glycolate

(R)-1-amino-2-propanol O-2-phosphate

S-adenosyl 3-(methylsulfanyl)propylamine

8-amino-7-oxononanoate

pimeloyl-CoA

dethiobiotin

7,8-diaminopelargonate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

3-phosphooxypyruvate

2-phosphoglycolate

4-amino-4-deoxychorismate

2-C-methyl-D-erythritol 4-phosphate

γ-L-glutamyl 5-phosphate

5-amino-6-(D-ribitylamino)uracil

(S)-4-amino-5-oxopentanoate

selenophosphate

5-(methylsulfanyl)-ribulose 1-phosphate

(S)-dihydroorotate

2-phenylethanol

2-methylbutanal

2-methylbutanol

3-methylbutanal

3-methylbutanol

isobutanol

indole-3-glycol aldehyde

indole-3-glycol

3-methoxy-4-hydroxyphenylglycolaldehyde

arsenite

5-hydroxyindole acetaldehyde

5-hydroxytryptophol

α-D-glucosamine 1-phosphate

2-O-(6-phospho-α-D-mannosyl)-D-glycerate

enol-phenylpyruvate

prephenate

glycerone phosphate

L-selenocystathionine

1,4-dihydroxy-2-naphthoate

L-canavanine

nicotinate adenine dinucleotide

β-nicotinate D-ribonucleotide

4-guanidinobutyramide

(S)-2,3,4,5-tetrahydrodipicolinate

(R)-4'-phosphopantothenate

(R)-pantothenate

1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one

glutathione disulfide

prephytoene diphosphate

propionamide

(indol-3-yl)acetamide

4-guanidinobutanoate

presqualene diphosphate

acrylate

acrylamide

1,4-dihydroxy-2-naphthoyl-CoA

quinolinate

dihydromethanophenazine

CoB-CoM heterodisulfide

methanophenazine

coenzyme B

S-methyl-5-thio-α-D-ribose 1-phosphate

S-methyl-5'-thioadenosine

O-demethylpuromycin

1-deoxy-L-glycero-tetrulose 4-phosphate

N-acetylpuromycin

N-acetyl-O-demethylpuromycin

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

N-acetyl-L-glutamate 5-semialdehyde

hop-22(29)-ene

squalene

lipid A disaccharide (E. coli)

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

lipid X

3'-phosphoadenylyl-sulfate

adenosine 5'-phosphosulfate

3-dehydroquinate

oxalate

7,8-didemethyl-8-hydroxy-5-deazariboflavin

oxaloacetate

α-ribazole 5'-phosphate

α-ribazole

hydrogenobyrinate a,c-diamide

6-phospho D-glucono-1,5-lactone

itaconate

(R)-2,3-dihydroxy-3-methylpentanoate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

L-histidinol phosphate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

isochorismate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

3-deoxy-D-arabino-heptulosonate 7-phosphate

dihydroxyacetone

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

4-phosphooxy-L-threonine

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

N-acetylglutamyl-phosphate

N-acetyl-β-D-mannosaminuronyl-(1→4)-N-acetyl-α-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

anthranilate

5-phospho-β-D-ribosylamine

shikimate 3-phosphate

histidinol

histidinal

S-formylglutathione

guanidinoacetate

canavaninosuccinate

L-arginino-succinate

cis,cis-muconate

(+)-muconolactone

muconolactone

5-enolpyruvoyl-shikimate 3-phosphate

(2-hydroxyphenyl)acetate

homogentisate

adenosine 5'-phosphoselenate

4-hydroxy-2-nonenal

2-oxovalerate

3-ethylmalate

(2S)-2-isopropyl-3-oxosuccinate

D-gluconate 6-phosphate

carbonic acid

2-hydroxy-5-(methylsulfanyl)-3-oxopent-1-enyl 1-phosphate

5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate

(4Z)-2-oxohept-4-enedioate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

cyanate

cis-coumarinic acid-β-D-glucoside

scopolin

4-hydroxybenzaldehyde

4-methylumbelliferyl glucoside

3-methyl-2-butenal

5-oxo-L-proline

4'-phosphopantetheine

4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate

2-aminomalonate semialdehyde

2-maleylacetate

hydrogenobyrinate

5-methylcytosine

(S)-2-amino-6-oxohexanoate

4-acetamidobutanoate

4-acetamidobutanal

N²-succinylglutamate

N²-succinyl-L-glutamate 5-semialdehyde

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

dialurate

5,6-dimethylbenzimidazole

acetoacetate

(R)-4'-phosphopantothenoyl-L-cysteine

hydroxypyruvate

glutathioselenol

selenodiglutathione

2-amino-3-carboxymuconate-6-semialdehyde

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-amino-2-methyl-5-pyrimidinemethanol

N⁵-carboxyaminoimidazole ribonucleotide

lipid IV_A

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

7-epicholate

mercuriphenyl acetate

(2S)-lactyl-2-diphospho-5'-guanosine

ammonia

2-iminoacetate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

L-gulono-1,4-lactone

L-xylo-hex-3-ulono-1,4-lactone

α-D-galacturonate 1-phosphate

1-piperideine 6-carboxylate

pyruvic oxime

bisorganyltrisulfane

5-hydroxyindole thiazolidine carboxylate

L-dehydro-ascorbate

cyclic-2,3-O-oxalyl-L-threonate

dehydroascorbate (bicyclic form)

cyclic- 3,4-O-oxalyl-L-threonate

2,3-dioxo-L-gulonate

2-carboxy-L-xylonolactone

2-carboxy-L-threo-pentonate

(2E,6E)-farnesyl diphosphate

pristanate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

N-acetyl-D-mannosamine 6-phosphate

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

(2S)-2-phospholactate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(R)-glycerate

2,3-diphospho-D-glycerate

3-phospho-D-glyceroyl-phosphate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

S⁰

oxygen

hydrogen sulfide

Hg⁰

pheophorbide a

3,8-divinyl protochlorophyllide a

chlorophyllide a

protochlorophyllide a

3,8-divinyl chlorophyllide a

chlorophyll a

magnesium-protoporphyrin IX 13-monomethyl ester

protoporphyrinogen IX

Mg-protoporphyrin

protoporphyrin IX

uroporphyrinogen-III

coproporphyrinogen I

uroporphyrinogen-I

protoheme

(Z,Z)-biliverdin-IX α

(Z,Z)-bilirubin-IX α

red chlorophyll catabolite

(2R,3Z)-phycocyanobilin

hydrogen cyanide

cob(I)alamin

adenosylcobalamin

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

adenosylcobyrate

adenosyl-cob(III)yrinate a,c-diamide

cobalt-precorrin-8

cobalt-precorrin-7

cobalt-precorrin-6A

cobalt-precorrin-6B

adenosylcobinamide-GDP

adenosyl-cobinamide phosphate

adenosylcobinamide

adenosylcobalamin 5'-phosphate

cob(II)yrinate a,c-diamide

cob(I)inamide

cob(I)yrinate a,c-diamide

cobalt-precorrin-5B

cobyrinate

cob(II)yrinate c-monoamide

cobalt-precorrin-5A

cobalt-precorrin-4

cobalt-sirohydrochlorin

cobalt-precorrin-3

cobalt-factor III

ethylphosphate

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysine

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanine

cyanophycin primer

cyanophycin primer-L-aspartate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-cysteinylglycine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

2-iminosuccinate

2-iminopropanoate

2-iminobutanoate

L-homocysteine

4-methylphenol

carbamate

L-α-amino-ε-keto-pimelate

L-valine

L-alanine

L-selenocysteine

glycine

L-proline

L-isoleucine

L-leucine

L-phenylalanine

L-tryptophan

L-methionine

L-cysteine

L-glutamate

L-aspartyl-4-phosphate

L-glutamine

L-cystathionine

L-serine

L,L-diaminopimelate

L-threonine

L-tyrosine

L-ornithine

L-aspartate

L-arginine

L-lysine

L-histidine

L-asparagine

N-carbamoyl-L-aspartate

N-acetyl-L-ornithine

N-acetyl-L-aspartate

N-formyl-L-methionine

L-citrulline

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

L-aspartate 4-semialdehyde

S-sulfo-L-cysteine

O-phospho-L-homoserine

L-canaline

L-homoserine

L-glutamate-5-semialdehyde

O-succinyl-L-homoserine

D-ornithine

meso-diaminopimelate

seleno-L-homocysteine

L-saccharopine

L-threonine 3-O-phosphate

3-phospho-L-serine

O-acetyl-L-homoserine

N-acetyl-L-methionine

N-acetyl-L-glutamate

sarcosine

D-alanine

D-glutamate

D-aspartate

D-proline

D-serine

D-lysine

creatine

β-alanine

XMP

IMP

5'-deoxyadenosine

ADP

ATP

AMP

1-(5-phospho-β-D-ribosyl)-ATP

GDP

GTP

dITP

dIDP

ITP

IDP

dGTP

dGDP

dATP

dADP

1-(5-phospho-β-D-ribosyl)-AMP

ppGpp

pppGpp

2'-deoxyinosine

2'-deoxyadenosine

GMP

adenylo-succinate

cyclic-AMP

hypoxanthine

2'-deoxyguanosine

dGMP

dAMP

isoguanine

8-oxo-dGTP

8-oxo-GTP

CDP-4-dehydro-6-deoxy-α-D-glucose

ADP-α-D-glucose

GDP-α-D-glucose

GDP-α-D-mannose

GDP-4-dehydro-α-D-rhamnose

GDP-4-dehydro-6-deoxy-β-L-galactose

GDP-α-D-perosamine

GDP-β-L-fucose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

CDP-α-D-glucose

dTDP-4-dehydro-β-L-rhamnose

dTDP-α-D-glucose

dTDP-β-L-rhamnose

UDP-α-D-galactose

UDP-N-acetyl-α-D-mannosamine

UDP-α-D-glucose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-α-D-glucuronate

UDP-α-D-galactofuranose

UDP-α-D-galacturonate

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

adenine

guanine

uracil

thymine

cytosine

preQ₁

NADP⁺

NAD⁺

NADPH

NADH

cyclic di-3',5'-guanylate

dUMP

dCMP

dTMP

dUDP

dCDP

dTDP

dTTP

dUTP

dCTP

UDP

CDP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

UTP

CTP

CMP

UMP

2-hydroxy-dATP

5-hydroxy-CTP

2'-deoxyuridine

2'-deoxycytidine

thymidine

inosine

adenosine

uridine

cytidine

5-fluorouracil

5-fluorocytosine

D-gluconate

L-gulonate

aldehydo-L-galactonate

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

lotaustralin

linamarin

neolinustatin

linustatin

taxiphyllin

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

5-phospho-α-D-ribose 1-diphosphate

D-sedoheptulose 1,7-bisphosphate

4-phospho-D-erythronate

α-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

6-deoxy-5-ketofructose 1-phosphate

D-fructose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

sucrose 6^F-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

D-ribulose-1,5-bisphosphate

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (mycobacteria)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

β-D-fructofuranose

glycolaldehyde

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

α-D-galactopyranose

β-D-galactopyranose

β-D-glucopyranose

α-D-glucopyranose

D-glyceraldehyde

D-xylulose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-glucosamine

glycerol

galactitol

β-D-cellobiose

maltotriose

sucrose

maltotetraose

maltopentaose

maltohexaose

maltoheptaose

aldehydo-D-galacturonate

salicylaldehyde

4-methylumbelliferone

scopoletin

coumarin

phytyl diphosphate

3-oxo-24-ethyl-cholest-5-ene

sitosterol

3-oxo-24-ethyl-cholest-4-ene

3-oxo-24-ethyl-26-hydroxy-cholest-4-ene

3-oxo-24-ethyl-cholest-4-en-26-oyl-CoA

3-oxo-24-ethyl-cholest-4,24-dien-26-oyl-CoA

3-oxo-24-(isopropanoyl)-cholest-4,24-dien-26-oyl-CoA

3,24-dioxo-cholest-4-en-26-oate

3-oxo-24-ethyl-cholest-4-en-26-oate

3-oxo-24-ethyl-26-al-cholest-4-ene

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

geranyl diphosphate

apo-4'-lycopenal

torulene

rhodopin

4'-apo-β-carotenal

β-carotene

prolycopene

9,9'-di-cis-ζ-carotene

all-trans neurosporene

all-trans-ζ-carotene

all-trans-phytoene

15-cis-phytoene

9,15,9'-tri-cis-ζ-carotene

all-trans-lycopene

all-trans-3,4-didehydrolycopene

β-zeacarotene

myxol

plectaniaxanthin

1'-hydroxy-γ-carotene

all-trans phytofluene

echinenone

canthaxanthin

adonixanthin

adonirubin

3-hydroxyechinenone

(3S,3'S)-astaxanthin

zeaxanthin

β-cryptoxanthin

hydroxy-β-zeacarotene

apo-4'-lycopenoate

puromycin

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

all-trans-octaprenyl diphosphate

geranylgeranyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-nonaprenyl diphosphate

3-decaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-hexaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

dioleoyl phosphatidate

1-oleoyl-2-lyso-glycerone phosphate

1-oleoyl-sn-glycerol 3-phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

myo-inositol

1D-myo-inositol 2-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 3-monophosphate

1D-myo-inositol 1-monophosphate

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylglycol

phytol

propan-1-ol

ethanol

butan-1-ol

3-(N-morpholino)propanal

methylglyoxal

phenylacetaldehyde

(4-hydroxyphenyl)acetaldehyde

benzaldehyde

phytenal

(S)-lactaldehyde

acetaldehyde

isobutanal

1-propanal

formaldehyde

butan-1-al

1-octanal

menadione

δ-tocopherol

γ-tocopherol

β-tocopherol

α-tocopherol

γ-tocotrienol

δ-tocotrienol

β-tocotrienol

α-tocotrienol

diacetyl

3-(methylsulfanyl)propanoate

pyruvate

2-oxoglutarate

glyoxylate

2-oxobutanoate

4-(methylsulfanyl)-2-oxobutanoate

5-chloro-4-hydroxy-2-oxopentanoate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

salicylate

4-aminobenzoate

benzoate

acetate

orotate

5-chloro-5-deoxy-D-ribonate

(R)-pantoate

aldehydo-D-glucuronate

(S)-1-pyrroline-5-carboxylate

palmitate

octanoate

decanoate

butanoate

linoleate

oleate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

α-linolenate

arachidonate

phytenate

(15Z)-tetracosenoate

(15S)-HPETE

formate

propanoate

(R)-lactate

(S)-lactate

(2R,3S)-2-methylisocitrate

cis-2-methylaconitate

cis-aconitate

D-threo-isocitrate

chorismate

succinate

fumarate

(S)-malate

4-tyrosol

4-hydroxybenzoate

benzene

coumarinate

menadiol

2-methyl-6-phytyl-1,4-benzoquinol

2,3-dimethyl-6-phytyl-1,4-benzoquinol

2,3-dimethyl-6-geranylgeranyl-1,4-benzoquinol

2-methyl-6-geranylgeranyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

3-demethylubiquinol-8

3-demethylubiquinol-9

3-demethylubiquinol-7

3-demethylubiquinol-10

demethylmenaquinol-8

demethylmenaquinol-9

menaquinol-8

menaquinol-9

ubiquinol-8

ubiquinol-9

ubiquinol-7

ubiquinol-10

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

3-methoxy-4-hydroxyphenylglycol

preQ₀

(2R)-2-hydroxy-2-methylbutanenitrile

2-hydroxy-2-methylpropanenitrile

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

cyclic pyranopterin phosphate

7,8-dihydromonapterin

7,8-dihydroneopterin

7,8-dihydroneopterin 3'-phosphate

molybdopterin

molybdopterin adenine dinucleotide

MoO₂-molybdopterin cofactor

7,8-dihydropteroate

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

riboflavin

FMN

FAD

FMNH₂

FADH₂

reduced riboflavin

6,7-dimethyl-8-(1-D-ribityl)lumazine

sirohydrochlorin

precorrin-3A

precorrin-2

precorrin-6B

precorrin-8x

precorrin-7

precorrin-5

precorrin-4

precorrin-3B

precorrin-6A

precorrin-1

nicotinate

nicotinamide

L-ascorbate

pyridoxal 5'-phosphate

pyridoxine 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxine

pyridoxal

pyridoxamine

coenzyme A

coenzyme M

oxidized coenzyme F₄₂₀-0

(R)-NADHX

(S)-NADHX

D-glucono-1,5-lactone

trans-dienelactone

cis-dienelactone

L-galactono-1,4-lactone

acetyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

malonyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

succinyl-CoA

3'-dephospho-CoA

itaconyl-CoA

3-methylcrotonyl-CoA

isovaleryl-CoA

oleoyl-CoA

acetoacetyl-CoA

hexadecanedioyl-CoA

palmitoyl-CoA

pristanoyl-CoA

2-hydroxyphytanoyl-CoA

phytanoyl-CoA

octanoyl-CoA

decanoyl-CoA

butanoyl-CoA

propanoyl-CoA

(Z)-15-tetracosenoyl-CoA

phytenoyl-CoA

androsterone

pregnenolone

testosterone

estrone

progesterone

campest-4-en-3-one

ethene

(indol-3-yl)acetate

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

3α,7α,12β-trihydroxy-5β-cholan-24-oate

3,24-dioxocholest-4-en-26-oyl-CoA

3-oxochol-4-en-24-oyl-CoA

3-oxochol-4,22-dien-24-oyl-CoA

22-hydroxy-3-oxochol-4-en-24-oyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

3-oxo-4,17-pregnadiene-20-carboxyl-CoA

17-hydroxy-3-oxo-4-pregnane-20-carboxyl-CoA

(25S)-3-oxocholest-4-en-26-oyl-CoA

3-oxocholest-4,24-dien-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

(25S)-26-oxocholest-4-en-3-one

(25S)-26-hydroxycholest-4-en-3-one

cholest-4-en-3-one

17-α-hydroxypregnenolone

cholest-5-en-3-one

cholesterol

3-β-hydroxyandrost-5-en-17-one

isocholate

3-dehydrocholate

glycocholate

cholate

campest-4-en-3β-ol

5α-androstane-3,17-dione

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

acetamide

agmatine

spermidine

spermine

putrescine

cadaverine

N¹-acetylspermidine

N¹-acetylspermine

N-acetylputrescine

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

selenide

thiosulfate

OH^-

nitrite

nitrate

hydrogensulfite

hydrogencarbonate

molybdate

superoxide

phosphate

diphosphate

triphosphate

chloride

Fe³⁺

Co²⁺

Fe²⁺

Hg²⁺

Mg²⁺

H⁺

ammonium

S-(hydroxymethyl)glutathione

3-(methylsulfanyl)propanal

methionol

dimethyl sulfide

glutathione

(R)-S-lactoylglutathione

(2R)-phospho-3-sulfolactate

3-sulfopyruvate

L-cysteate

3-(N-morpholino)propanesulfonate

isethionate

1-butanesulfonate

methanesulfonate

(2R)-3-sulfolactate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

thiocyanate

methanethiol

S-sulfanylglutathione

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

hydroxyl radical

monodehydroascorbate radical

2-methoxy-6-(all-trans-octaprenyl)phenol

2-octaprenylphenol

(S)-3-hydroxy-isobutanoate

3-(all-trans-octaprenyl)benzene-1,2-diol

5,10-methenyltetrahydrofolate mono-L-glutamate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

(R)-citramalate