an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

(S)-4-hydroxy-2-oxopentanoate

2-oxopent-4-enoate

glutathione disulfide

3-[(4-amino-6-chloro-1,3,5-triazin-2-yl)amino]benzenesulfonate

2,2'-disulfonyl azobenzene

phthalate

4-methyl-2-oxopentanoate

(S)-3-methyl-2-oxopentanoate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

benzoylsuccinyl-CoA

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

4-hydroxy-2-nonenal

γ-butyrobetaine

4-pyridoxolactone

itaconate

thiamine diphosphate

2-(α-hydroxyethyl)thiamine diphosphate

tartronate semialdehyde

hydroxypyruvate

acetyl phosphate

3-oxopropanoate

succinate semialdehyde

S-formylmycothiol

S-(hydroxymethyl)mycothiol

1-(2-amino-2-deoxy-α-D-glucopyranosyl)-1D-myo-inositol

1-(2-acetamido-2-deoxy-α-D-glucopyranosyl)-1D-myo-inositol

(4S)-4-hydroxy-2-oxoheptanedioate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

N²-succinyl-L-glutamate 5-semialdehyde

N²-succinyl-L-ornithine

DNA without lesion

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

(S)-2,3,4,5-tetrahydrodipicolinate

histidinal

(R)-4'-phosphopantothenoyl-L-cysteine

xanthine

formamide

coenzyme F₃₉₀-A

H₂

mycothione

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

luteolin 7-O-β-D-glucuronide

luteolin 7-O-β-D-diglucuronide

luteolin 7-O-[β-D-glucosyluronate-(1,2)-β-D-glucosiduronate]-4'-O-β-D-glucosiduronate

L-selenocystathionine

3-keto-β-D-galactose

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

oxalosuccinate

streptomycin 6-phosphate

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate

N⁵-carboxyaminoimidazole ribonucleotide

butyramide

propionamide

acrylamide

(indol-3-yl)acetamide

carbonyl sulfide

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

2-O-(6-phospho-α-D-mannosyl)-D-glycerate

ammonia

5-aminolevulinate

N-(2,3-dihydroxybenzoyl)-L-serine trimer

cis,cis-muconate

urea-1-carboxylate

hydroxylamine

mercuriphenyl acetate

3-oxopristanoyl-CoA

4,8,12-trimethyltridecanoyl-CoA

4-guanidinobutanoate

4-guanidinobutyramide

acrylate

dehydroprephenate

3-(cyclohexa-1,3-dien-1-yl)-2-oxopropanoate

3-[(1S)-cyclohex-3-en-1-yl)]-2-oxopropanoate

L-3-cyclohex-2'-enylalanine

dialurate

(3S,5S)-3,5-diaminohexanoate

(S)-5-amino-3-oxohexanoate

carbon monoxide

4-amino-2-methyl-5-pyrimidinemethanol

2-dehydro-3-deoxy-D-gluconate

(2R)-2-amino-4-oxopentanoate

(2R,4S)-2, 4-diaminopentanoate

5-aminopentanoate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

1-piperideine 6-carboxylate

mesaconate

2-oxoglutaramate

O-1,4-α-L-dihydrostreptosyl-streptidine 6-phosphate

dihydrostreptomycin 6-phosphate

dTDP-L-dihydrostreptose

CDP-N-methyl-L-glucosamine

streptidine 6-phosphate

N¹-amidinostreptamine 6-phosphate

(2S)-2-isopropyl-3-oxosuccinate

(4-hydroxyphenyl)acetate

5-amino-6-(5-phospho-D-ribitylamino)uracil

reduced DCPIP

oxidized DCPIP

2-amino-3-carboxymuconate-6-semialdehyde

1-O-(2-acetamido-2-deoxy-α-D-glucopyranosyl)-1D-myo-inositol 3-phosphate

D-mannopyranosyl-1-phosphoheptaprenol

α, α'-trehalose 6,6'-bismycolate

crotonate

cyclohex-1,5-diene-1-carbonyl-CoA

6-hydroxycyclohex-1-ene-1-carbonyl-CoA

6-oxocyclohex-1-ene-1-carbonyl-CoA

3-hydroxypimeloyl-CoA

3-oxopimeloyl-CoA

cyclohexane-1-carboxylate

cyclohexane-1-carbonyl-CoA

2-hydroxy-6-oxocyclohexane-1-carbonyl-CoA

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

propanoyl phosphate

octopamine

(R)-synephrine

N-acetyl-D-muramate 6-phosphate

1,6-anhydro-N-acetyl-β-muramate

L-xylo-hex-3-ulono-1,4-lactone

2-dehydro-6-phospho-D-gluconate

2-keto-D-gluconate

pseudouridine

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

glutathioselenol

selenodiglutathione

autoinducer 2

S-ribosyl-L-homocysteine

α-D-galacturonate 1-phosphate

pyruvic oxime

2,6-dioxo-6-phenylhexa-3-enoate

5-hydroxyindole thiazolidine carboxylate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

L-dehydro-ascorbate

cyclic-2,3-O-oxalyl-L-threonate

dehydroascorbate (bicyclic form)

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

cyclic- 3,4-O-oxalyl-L-threonate

2,3-dioxo-L-gulonate

2-carboxy-L-xylonolactone

2-carboxy-L-threo-pentonate

3-dehydroshikimate

shikimate

α-D-glucosamine 1-phosphate

phosphoenolpyruvate

(R)-4'-phosphopantothenate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

isopentenyl diphosphate

prenyl diphosphate

oxalate

7,8-didemethyl-8-hydroxy-5-deazariboflavin

5-amino-6-(D-ribitylamino)uracil

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

3'-phosphoadenylyl-sulfate

adenosine 3',5'-bisphosphate

5-dehydro-2-deoxy-D-gluconate 6-phosphate

5-dehydro-2-deoxy-D-gluconate

γ-L-glutamyl 5-phosphate

nicotinate adenine dinucleotide

β-nicotinate D-ribonucleotide

thiamine phosphate

(R)-1-aminopropan-2-ol

(R)-1-amino-2-propanol O-2-phosphate

2-dehydropantoate

3-methyl-2-oxobutanoate

α-ribazole 5'-phosphate

α-ribazole

5,6-dimethylbenzimidazole

anthranilate

N-(5-phosphoribosyl)-anthranilate

3-deoxy-D-arabino-heptulosonate 7-phosphate

H₂O

(S)-dihydroorotate

hydrogenobyrinate a,c-diamide

D-gluconate 6-phosphate

dihydroxyacetone

L-arginino-succinate

L-canavanine

canavaninosuccinate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

O-ureido-L-homoserine

N-acetylglutamyl-phosphate

urea

selenophosphate

N-acetyl-L-glutamate 5-semialdehyde

glycerone phosphate

orotidine 5'-phosphate

imidazole acetol-phosphate

D-erythro-imidazole-glycerol-phosphate

quinolinate

methylamine

dethiobiotin

8-amino-7-oxononanoate

pimeloyl-CoA

(R)-pantothenate

CO₂

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

L-β-lysine

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

N-succinyl-2-amino-6-ketopimelate

N-succinyl-L,L-2,6-diaminopimelate

3-phosphooxypyruvate

4-phosphooxy-L-threonine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

citrate

oxaloacetate

hydrogen peroxide

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2,3-didehydroadipyl-CoA

6-phospho D-glucono-1,5-lactone

1-deoxy-L-glycero-tetrulose 4-phosphate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

5-amino-6-(5-phospho-D-ribosylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

prephenate

carbamoyl phosphate

3-dehydroquinate

shikimate 3-phosphate

5-enolpyruvoyl-shikimate 3-phosphate

(2S)-4-acetamido-2-aminobutanoate

ectoine

coproporphyrinogen III

pseudouridine 5'-phosphate

hydrogenobyrinate

2-C-methyl-D-erythritol 4-phosphate

L-gulono-1,4-lactone

4'-phosphopantetheine

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

(R)-2,3-dihydroxy-3-methylpentanoate

histidinol

L-histidinol phosphate

4-maleyl-acetoacetate

homogentisate

isochorismate

(2S)-lactyl-2-diphospho-5'-guanosine

(S)-2-amino-6-oxohexanoate

5-hydroxyindole acetaldehyde

5-hydroxytryptophol

3-methoxy-4-hydroxyphenylglycolaldehyde

indole-3-glycol aldehyde

indole-3-glycol

isobutanol

3-methylbutanal

3-methylbutanol

2-methylbutanal

2-methylbutanol

2-phenylethanol

prephytoene diphosphate

4-aminobutanoate

ethanolamine

(4,5-dihydro-5-oxofuran-2-yl)-acetate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

1,4-dihydroxy-2-naphthoyl-CoA

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

S-methyl-5-thio-α-D-ribose 1-phosphate

S-methyl-5'-thioadenosine

5-deoxy-α-ribose 1-phosphate

1,4-dihydroxy-2-naphthoate

preuroporphyrinogen

porphobilinogen

(S)-4-amino-5-oxopentanoate

ethylamine

N-ethylglycine

2-iminoacetate

enol-phenylpyruvate

muconolactone

4-methyl-3-oxoadipate-enol-lactone

3-methylmuconolactone

4-methyl-3-oxoadipate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

(E)-2-benzylidenesuccinyl-CoA

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

methylsalicylate

salicyl alcohol

7,8-diaminopelargonate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

β-D-fructose 2,6-bisphosphate

methyl-1,4-benzoquinol

2-methyl-1,4-benzoquinone

5-methylcytosine

tryptamine

3,4-dihydroxyphenylacetaldehyde

5-methoxyindoleacetaldehyde

5-methoxytryptamine

4-acetamidobutanal

dimethylsulfoniopropanoate

4-acetamidobutanoate

D-glucurono-6,3-lactone

propynoate

prop-2-ynal

5-hydroxyindole acetate

4-imidazoleacetate

imidazole acetaldehyde

4-amino-4-deoxychorismate

(2S)-2-isopropylmalate

O-acetyl-L-serine

hydrogen selenide

4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate

carbonic acid

acetoacetate

(2E,6E)-farnesol

(2E,6E)-farnesyl diphosphate

pristanate

L-2-aminoadipate

L-α-amino-ε-keto-pimelate

L-methionine

L-cysteine

L-valine

L-alanine

L-leucine

glycine

L-phenylalanine

L-tryptophan

L-isoleucine

L-proline

L-selenocysteine

L-asparagine

L-cystathionine

L,L-diaminopimelate

L-arginine

L-tyrosine

L-ornithine

L-threonine

L-glutamine

L-glutamate

L-serine

L-aspartyl-4-phosphate

L-aspartate

L-lysine

L-2,4-diaminobutanoate

L-histidine

N-carbamoyl-L-aspartate

N-acetyl-L-citrulline

N-acetyl-L-ornithine

N-methyl-L-glutamate

N⁵-methyl-L-glutamine

L-citrulline

3-sulfino-L-alanine

L-canaline

O-succinyl-L-homoserine

L-4-hydroxyglutamate semialdehyde

L-cystine

L-homoserine

O-phospho-L-homoserine

L-glutamate-5-semialdehyde

L-homocysteine

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

L-aspartate 4-semialdehyde

S-sulfo-L-cysteine

D-ornithine

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

S-sulfanyl-L-cysteine

L-selenomethionine

seleno-L-homocysteine

O-acetyl-L-homoserine

N-acetyl-L-glutamate

N-acetyl-L-methionine

sarcosine

(2S, 3S)-3-methylaspartate

3-phospho-L-serine

D-aspartate

D-proline

D-glutamate

D-cysteine

D-alanine

β-alanine

(S)-3-amino-2-methylpropanoate

cyclic-GMP

cyclic-AMP

2'-deoxyguanosine

pppGpp

dIMP

XTP

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

ppGpp

dGMP

dAMP

isoguanine

8-oxo-dGTP

8-oxo-GTP

5'-deoxyadenosine

dATP

dGTP

ITP

IDP

dITP

dIDP

GMP

AMP

ATP

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

ADP

dADP

GDP

dGDP

GTP

adenylo-succinate

IMP

2'-deoxyinosine

2'-deoxyadenosine

XMP

hypoxanthine

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

ADP-α-D-glucose

GDP-α-D-mannose

GDP-α-D-glucose

CDP-α-D-glucose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

dTDP-α-D-glucose

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-α-D-galacturonate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-α-D-glucose

UDP-α-D-galactofuranose

UDP-α-D-galactose

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

guanine

adenine

uracil

thymine

cytosine

preQ₁

N¹-ethyladenine

N3-methylcytosine

N¹-methyladenine

cyclic di-3',5'-guanylate

dCMP

dTMP

dUMP

dTDP

dCDP

dUDP

dCTP

dTTP

dUTP

CDP

UDP

β-nicotinamide D-ribonucleotide

CTP

UTP

UMP

CMP

2-hydroxy-dATP

5-hydroxy-CTP

two adjacent thymidines in DNA

(5R)-5,6-dihydro-5-(thymidin-7-yl)thymidine (in DNA)

NADP⁺

NAD⁺

NADPH

NADH

thymidine

2'-deoxyuridine

2'-deoxycytidine

xanthosine

guanosine

adenosine

inosine

uridine

cytidine

5-fluorouracil

5-fluorocytosine

aldehydo-L-galactonate

D-gluconate

L-gulonate

D-altronate

3'-ketolactose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

β-D-galactofuranosyl-(1→5)-β-D-galactofuranosyl-(1→4)-α-L-rhamnopyranosyl-(1→3)-N-acetyl-α-D-glucosaminyl-diphospho-trans,octacis-decaprenol

[β-D-galactofuranosyl-(1→5)-β-D-galactofuranosyl-(1→6)]₁₄-β-D-galactofuranosyl-(1→5)-β-D-galactofuranosyl-(1→4)--L-rhamnopyranosyl-(1→3)-N-acetyl-α-D-glucosaminyl-diphospho-trans,octacis-decaprenol

streptomycin

4-phospho-D-erythronate

D-erythrose 4-phosphate

5-phospho-α-D-ribose 1-diphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-sedoheptulose 7-phosphate

L-fuculose 1-phosphate

α-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

D-fructose 6-phosphate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

sucrose 6^F-phosphate

α,α-trehalose 6-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (mycobacteria)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan tetramer with an L,D cross-link (Enterococcus faecium)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

β-D-fructofuranose

glycolaldehyde

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

β-D-galactopyranose

β-D-glucopyranose

α-D-glucopyranose

D-glyceraldehyde

L-glyceraldehyde

5-chloro-5-deoxy-D-ribono-γ-lactone

5-chloro-5-deoxy-D-ribose

D-xylulose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-mannosamine

N-acetyl-β-D-glucosamine

N-acetyl-β-neuraminate

glycerol

D-mannitol 1-phosphate

XXXG xyloglucan oligosaccharide

maltotriose

mycobacterial arabinogalactan containing α(1->3) and β(1->2) arabinofuran linkages

mycobacterial arabinogalactan primed with arabinofuran

mycobacterial arabinogalactan containing linear arabinofuran

mycobacterial arabinogalactan containing extended α(1->3) arabinofuran linkages

mycobacterial arabinogalactan containing α(1->3) arabinofuran linkages

allolactose

sucrose

α-lactose

α,α-trehalose

maltohexaose

maltoheptaose

maltopentaose

maltotetraose

XLLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XXLG xyloglucan oligosaccharide

aldehydo-D-galacturonate

salicylaldehyde

phytyl diphosphate

all-trans-retinol

all-trans-retinyl palmitate

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

(1S,2S,4R)-limonene-1,2-diol

(1R,2R,4S)-limonene-1,2-diol

(1S,4R)-1-hydroxymenth-8-en-2-one

(1R,4S)-1-hydroxymenth-8-en-2-one

(+)-(1S,4R)-limonene-1,2- epoxide

(4R)-7-hydroxy-4-isoprenyl-7-methyl-2-oxo-oxepanone

(4S)-7-hydroxy-4-isoprenyl-7-methyl-2-oxo-oxepanone

all-trans phytofluene

15-cis-phytoene

ferric-[N-(2,3-dihydroxybenzoyl)-L-serine trimer] complex

betanidin quinone

betanidin

(5E)-3-oxo-dodec-5-enoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

(5Z)-tetradecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

6-cis-tridecenoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

4-cis-undecenoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

6-trans-tridecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

4-trans-undecenoyl-CoA

2-trans, 5-cis, 7-trans-tetradecatrienoyl-CoA

5-cis, 7-trans-tetradecadienoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

2-trans-nonenoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

di-trans,octa-cis-undecaprenyl phosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

geranylgeranyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-undecaprenyl diphosphate

all-trans-dodecaprenyl diphosphate

all-trans-tridecaprenyl diphosphate

dioleoyl phosphatidate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-oleoyl-2-lyso-glycerone phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-oleoyl-sn-glycerol 3-phosphate

6-O-mycolyl-β-D-mannopyranosyl-1-phosphoheptaprenol

6-O-cis-methoxy-mycolyl-β-D-mannopyranosyl-1-phosphoheptaprenol

6-O-trans-methoxy-mycolyl-β-D-mannopyranosyl-1-phosphoheptaprenol

6-O-cis-keto-mycolyl-β-D-mannopyranosyl-1-phosphoheptaprenol

6-O-trans-keto-mycolyl-β-D-mannopyranosyl-1-phosphoheptaprenol

trehalose-cis-methoxy-di-mycolate

trehalose-trans-methoxy-di-mycolate

trehalose-cis-keto-di-mycolate

trehalose-trans-keto-di-mycolate

α, α'-trehalose 6-α-mycolate

6-O-α-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

scyllo-inositol

1D-chiro-inositol

myo-inositol

1-amino-1-deoxy-scyllo-inositol

1-guanidino-1-deoxy-scyllo-inositol

D-1-guanidino-1-deoxy-3-dehydro-scyllo-inositol

D-1-guanidino-3-amino-1,3-dideoxy-scyllo-inositol

1-keto-D-chiro-inositol

scyllo-inosose

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

1-amino-1-deoxy-scyllo-inositol 4-phosphate

1-guanidino-1-deoxy-scyllo-inositol 4-phosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 3-monophosphate

3,5-cyclohexadiene-1,2-diol-1-carboxylate

biphenyl-2,3-diol

protocatechuate

catechol

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylglycol

dopamine

(R)-adrenaline

(R)-noradrenaline

3,4-dihydroxyphenylacetate

3,4-dihydroxymandelate

(S)-propane-1,2-diol

1-octanol

butan-1-ol

ethanol

propan-1-ol

phytol

methanol

(2E,6E)-farnesal

methylglyoxal

benzaldehyde

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

phytenal

(S)-lactaldehyde

butan-1-al

formaldehyde

acetaldehyde

isobutanal

1-propanal

1-octanal

menadione

caldariellaquinone

Reactive Blue 5

diacetyl

acetone

2',4,4',6'-tetrahydroxychalcone

pyruvate

5-chloro-4-hydroxy-2-oxopentanoate

2-oxobutanoate

glyoxylate

2-oxoglutarate

4-(methylsulfanyl)-2-oxobutanoate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

(3R)-3-isopropenyl-6-oxoheptanoate

(3S)-3-isopropenyl-6-oxoheptanoate

salicylate

4-aminobenzoate

benzoate

acetate

L-carnitine

5-chloro-5-deoxy-D-ribonate

5-deoxy-D-glucuronate

orotate

(R)-pantoate

D-tagaturonate

aldehydo-D-glucuronate

β-D-glucuronate

(S)-1-pyrroline-5-carboxylate

decanoate

butanoate

stearate

palmitate

octanoate

linoleate

γ-linolenate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

(3E,5Z)-tetradecadienoate

oleate

di-homo-γ-linolenate

(15Z)-tetracosenoate

phytenate

(2E,6E)-farnesoate

3-oxoadipate

formate

propanoate

(R)-lactate

(S)-lactate

(R)-glycerate

(R)-3-hydroxybutanoate

cis-aconitate

(2R)-homocitrate

cis-homoaconitate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

chorismate

D-glucarate

succinate

fumarate

(S)-malate

benzene

4-tyrosol

4-vinylguaiacol

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

ferulate

luteolin

6,7-dehydrobaicalein

baicalein

tyramine

2-phenylethylamine

serotonin

phenol

4-methylphenol

menadiol

caldariellaquinol

3-demethylubiquinol-8

demethylmenaquinol-8

demethylmenaquinol-7

demethylmenaquinol-9

demethylmenaquinol-6

demethylmenaquinol-10

demethylmenaquinol-11

demethylmenaquinol-12

demethylmenaquinol-13

menaquinol-8

menaquinol-13

menaquinol-12

menaquinol-11

menaquinol-10

menaquinol-7

menaquinol-6

menaquinol-9

ubiquinol-8

indole

(indol-3-yl)acetaldehyde

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

3-methoxy-4-hydroxyphenylglycol

metanephrine

normetanephrine

vanillyl mandelate

propionitrile

acrylonitrile

(indole-3-yl)acetonitrile

3-cyanopyridine

preQ₀

hydrogen cyanide

n-butyronitrile

7,8-dihydroneopterin 3'-phosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

cyclic pyranopterin phosphate

molybdopterin adenine dinucleotide

molybdopterin

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydromonapterin

7,8-dihydroneopterin

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

7,8-dihydropteroate

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

FMN

FAD

riboflavin

FMNH₂

reduced riboflavin

FADH₂

6,7-dimethyl-8-(1-D-ribityl)lumazine

cob(I)alamin

adenosylcobalamin

sirohydrochlorin

cobyrinate

cobalt-precorrin-5A

cobalt-precorrin-4

cobalt-precorrin-6A

cobalt-precorrin-5B

cobalt-precorrin-6B

cobalt-precorrin-8

cobalt-precorrin-7

precorrin-6B

precorrin-8x

precorrin-7

precorrin-3A

precorrin-2

cobalt-precorrin-3

cobalt-precorrin-2

precorrin-4

precorrin-3B

precorrin-1

precorrin-5

precorrin-6A

salinosporamide A

nicotinamide

L-ascorbate

thiamine

nicotinate

pyridoxal

pyridoxine

pyridoxamine

pyridoxal 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxine 5'-phosphate

coenzyme A

oxidized coenzyme F₄₂₀-2

oxidized coenzyme F₄₂₀-0

oxidized coenzyme F₄₂₀-1

(R)-NADHX

(S)-NADHX

glycine betaine

D-glucono-1,5-lactone

L-galactono-1,4-lactone

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

L-carnitinyl-CoA

γ-butyrobetainyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

itaconyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

4-chloro-3-hydroxybutyryl-CoA

4-chloro-crotonyl-CoA

chloroethylmalonyl-CoA

(S)-3-aminobutanoyl-CoA

(3R)-3-isopropenyl-6-oxoheptanoyl-CoA

(3S)-3-isopropenyl-6-oxoheptanoyl-CoA

(E)-glutaconyl-CoA

glutaryl-CoA

phenylacetyl-CoA

2-methylbutanoyl-CoA

succinyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

(2E,5Z)-tetradecenoyl-CoA

acetyl-CoA

isobutanoyl-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

(3S)-hydroxyadipyl-CoA

(E)-2-methylcrotonoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-hydroxyisovaleryl-CoA

3'-dephospho-CoA

(+)-7-epi-jasmonoyl-CoA

dihomo γ-linolenoyl-CoA

2-methylacetoacetyl-CoA

malonyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

3-oxoadipyl-CoA

3-oxo-palmitoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxooctanoyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

hexadecanedioyl-CoA

stearoyl-CoA

palmitoyl-CoA

pristanoyl-CoA

2-hydroxyphytanoyl-CoA

phytanoyl-CoA

decanoyl-CoA

octanoyl-CoA

butanoyl-CoA

propanoyl-CoA

cerotoyl-CoA

2-carboxy-cerotoyl-CoA

(Z)-15-tetracosenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-malyl-CoA

phytenoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-octadec-2-enoyl-CoA

crotonyl-CoA

(S)-methylmalonyl-CoA

(R)-methylmalonyl-CoA

ethene

phenylacetate

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

(+)-7-epi-jasmonate

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

methane

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

acetamide

(S)-2-chloropropanoate

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

sn-glycero-3-phosphocholine

betaine aldehyde

choline

betaine aldehyde hydrate

agmatine

putrescine

N-acetylputrescine

4-[(E)-2-(methylamino)ethenyl]phenol

4-[(Z)-2-aminoethenyl]phenol

2-aminoprop-2-enoate

2-iminopropanoate

(2Z)-2-aminobut-2-enoate

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

selenide

thiosulfate

OH^-

nitrite

nitrate

hydrogensulfite

hydrogencarbonate

molybdate

superoxide

phosphate

diphosphate

triphosphate

chloride

Fe³⁺

Mg²⁺

Fe²⁺

Co²⁺

Hg²⁺

H⁺

ammonium

K⁺

S-(hydroxymethyl)glutathione

dimethyl sulfide

3-(methylsulfanyl)propanal

methionol

3-dimethylsulfoniopropionaldehyde

glutathione

(R)-S-lactoylglutathione

3-sulfopyruvate

L-cysteate

4-methyl-5-(2-phosphooxyethyl)thiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

5-(2-hydroxyethyl)-4-methylthiazole

thiocyanate

mycothiol

deacetylmycothiol

methanethiol

S-sulfanylglutathione

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

nitroethane

hydroxyl radical

monodehydroascorbate radical

(S)-3-hydroxy-isobutanoate

5,10-methenyltetrahydrofolate mono-L-glutamate

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

(S)-citramalate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

N-acetyl-D-mannosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

(2S)-2-phospholactate

2,3-diphospho-D-glycerate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

sn-glycerol 3-phosphate

N-acetyl-α-D-glucosaminyl-diphospho-trans,octacis-decaprenol

α-L-rhamnopyranosyl-(1→3)-N-acetyl-α-D-glucosaminyl-diphospho-trans,octacis-decaprenol

β-D-galactofuranosyl-(1→4)-α-L-rhamnopyranosyl-(1→3)-N-acetyl-α-D-glucosaminyl-diphospho-trans,octacis-decaprenol

trans,octacis-decaprenylphospho-β-D-ribofuranose 5-phosphate

trans,octacis-decaprenylphospho-β-D-ribofuranose

trans,octacis-decaprenylphospho-β-D-erythro-pentofuranosid-2-ulose

Hg⁰

hydrogen sulfide

oxygen

protochlorophyllide a

chlorophyllide a

3,8-divinyl protochlorophyllide a

protoporphyrinogen IX

magnesium-protoporphyrin IX 13-monomethyl ester

protoporphyrin IX

coproporphyrinogen I

uroporphyrinogen-I

uroporphyrinogen-III

Mg-protoporphyrin

protoheme

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

adenosylcobinamide

adenosylcobyrate

adenosyl-cobinamide phosphate

adenosylcobalamin 5'-phosphate

adenosylcobinamide-GDP

cobalt-factor III

cobalt-sirohydrochlorin

cob(II)yrinate a,c-diamide

cob(II)yrinate c-monoamide

cob(I)inamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

ethylphosphate

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal

4-[(2Z)-2-(methylimino)ethyl]phenol

4-(2-iminoethyl)phenol

2-iminobutanoate

2-iminosuccinate

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

N-acetyl-L-glutaminyl-L-glutamine amide

N-acetyl-L-glutaminyl-L-glutamine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine