ID Name References
C1

an oxidized electron donor

C2

a reduced electron donor

C3

a deaminated amino group acceptor

C4

an aminated amino group acceptor

C5

Charged-LEU-tRNAs

C6

LEU-tRNAs

C7

a 2-oxo acid

C8

an amino acid

C9

an acyl-CoA

C10

a carboxylate

C11

an oxidized ferredoxin [iron-sulfur] cluster

C12

a reduced ferredoxin [iron-sulfur] cluster

C13

NAD(P)H

C14

NAD(P)+

C15

an L-tyrosyl-[tRNAtyr]

C16

a tRNAtyr

C17

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

C18

4α,14α-dimethyl-porifersta-8,25(27)-dienol

C24

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

C26

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

C27

isoshowacene

C29

2-hydroxyhexadecanal

C30

16-sinapoyloxypalmitate

C31

3-methylquinolin-2-ol

C32

(22R)-hydroxycholesterol

C37

N-(2-methylpropyl)hydroxylamine

C38

chloroeremomycin

C39

3-hydroxy-3-methylbutanoate

C40

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C41

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C42

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C43

rhamnosyl tetracyclic spinosyn pseudoaglycone

C44

rhamnosyl tricyclic spinosyn pseudoaglycone

C45

spinosyn tricyclic macrolactone

C46

11-dehydro-15-oxo spinosyn macrolactone

C47

15-oxo spinosyn macrolactone

C48

spinosyn macrolactone

C51

diethylamine N-oxide

C52

triethylamine N-oxide

C53

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

C55

nitroxyl

C57

trans,octacis-decaprenylphospho-β-D-arabinofuranose

C58

1,3-dihydro-2H-imidazol-2-one

C63

2-phenylethyl β-D-glucopyranoside

C64

formyl hopane

C65

ribosyl hopane

C66

adenosyl hopane

C70

(2Z)-2-hydroxypenta-2,4-dienoate

C72

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

C73

(2Z)-2,4-dihydroxypent-2-enoate

C75

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

C76

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

C77

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

C79

(+)-3'-hydroxylarreatricin

C80

(+)-larreatricin

C81

2-trans,4-trans-xanthoxin

C12056

L-arginino-succinate

C933

L-canavanine

C932

canavaninosuccinate

C11543

H2O

C13850

hydrogenobyrinate a,c-diamide

C891

citrate

C1528

2-dehydropantoate

C3262

3-methyl-2-oxobutanoate

C11539

xanthine

C3684

3-deoxy-α-D-manno-2-octulosonate

C928

CO2

C11760

prephenate

C638

5-(methylsulfanyl)-ribulose 1-phosphate

C14053

S-methyl-5-thio-α-D-ribose 1-phosphate

C1196

S-methyl-5'-thioadenosine

C15238

5-deoxy-α-ribose 1-phosphate

C12048

γ-L-glutamyl 5-phosphate

C1530

(2R,3S)-3-isopropylmalate

C13417

2-isopropylmaleate

C1438

(2S)-2-isopropylmalate

C11946

N-(5-phosphoribosyl)-anthranilate

C12044

L-histidinol phosphate

C12125

imidazole acetol-phosphate

C6444

oxaloacetate

C12352

(S)-dihydroorotate

C11874

N-succinyl-2-amino-6-ketopimelate

C12368

(S)-2,3,4,5-tetrahydrodipicolinate

C6359

(S)-2-acetolactate

C6369

(S)-2-aceto-2-hydroxybutanoate

C1621

(R)-2,3-dihydroxy-3-methylpentanoate

C12176

histidinol

C12178

histidinal

C11693

(indol-3 yl)acetyl-CoA

C8333

(indol-3-yl)pyruvate

C1353

3-phosphooxypyruvate

C1265

4-phosphooxy-L-threonine

C3343

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

C11635

L-tartrate

C11812

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

C1268

(R)-4'-phosphopantothenate

C11800

(R)-pantothenate

C1431

3-dehydroshikimate

C12369

3-dehydroquinate

C11479

phosphoenolpyruvate

C2586

(E)-4-coumaroyl-CoA

C371

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

C15306

2,3-didehydroadipyl-CoA

C11767

porphobilinogen

C1231

5-aminolevulinate

C1538

2-C-methyl-D-erythritol 4-phosphate

C11604

thiamine diphosphate

C1552

2-(α-hydroxyethyl)thiamine diphosphate

C1445

adenosine 3',5'-bisphosphate

C192

adenosine 5'-phosphoselenate

C996

adenosine 5'-phosphosulfate

C11794

3'-phosphoadenylyl-sulfate

C1184

5-phospho-β-D-ribosylamine

C11774

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

C12074

3-deoxy-D-manno-octulosonate 8-phosphate

C13919

4-guanidinobutanoate

C1303

4-guanidinobutyramide

C1096

acrylate

C1098

acrylamide

C8366

(indol-3-yl)acetamide

C11756

propionamide

C1449

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

C12158

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

C1522

3-demethylubiquinol-6

C1427

5-enolpyruvoyl-shikimate 3-phosphate

C10349

glycerone phosphate

C11832

orotidine 5'-phosphate

C9422

nicotinate adenine dinucleotide

C12162

hydrogen peroxide

C2191

carbamoyl phosphate

C3417

(S)-3-methyl-2-oxopentanoate

C3319

4-methyl-2-oxopentanoate

C11710

(R)-4'-phosphopantothenoyl-L-cysteine

C11802

4'-phosphopantetheine

C873

coproporphyrinogen III

C11653

shikimate

C12390

D-erythro-imidazole-glycerol-phosphate

C1325

4-amino-4-deoxychorismate

C10261

ADP-L-glycero-β-D-manno-heptose

C3629

vanillin

C12139

preuroporphyrinogen

C13970

β-D-fructose 2,6-bisphosphate

C14181

2-maleylacetate

C11930

N-acetylglutamyl-phosphate

C12325

1,4-dihydroxy-2-naphthoate

C571

4-hydroxy-2-nonenal

C11652

shikimate 3-phosphate

C12192

carbonic acid

C191

L-selenocystathionine

C142

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

C1010

ammonia

C922

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

C12288

(E)-2-benzylidenesuccinyl-CoA

C6099

lipid IVA

C10794

lipid A disaccharide (E. coli)

C11857

β-nicotinate D-ribonucleotide

C13225

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

C3259

2-oxovalerate

C506

3-ethylmalate

C13786

(2S)-2-isopropyl-3-oxosuccinate

C12078

itaconate

C1429

3-deoxy-D-arabino-heptulosonate 7-phosphate

C1036

α-ribazole 5'-phosphate

C12315

5,6-dimethylbenzimidazole

C1038

α-ribazole

C11715

quinolinate

C11873

N-succinyl-L,L-2,6-diaminopimelate

C3287

trans-O-hydroxybenzylidenepyruvate

C13627

DNA without lesion

C4674

glutathione disulfide

C13851

hydrogenobyrinate

C13635

β-D-ribosylnicotinate

C11646

dimethylsulfoniopropanoate

C14137

4-acetamidobutanoate

C14179

4-acetamidobutanal

C12385

D-glucurono-6,3-lactone

C13868

propynoate

C15240

prop-2-ynal

C1342

3,4-dihydroxyphenylacetaldehyde

C423

3-methoxy-4-hydroxyphenylglycolaldehyde

C8406

5-hydroxyindole acetate

C8407

5-hydroxyindole acetaldehyde

C1287

4-imidazoleacetate

C12117

imidazole acetaldehyde

C855

coenzyme F390-A

C12584

N-(2,3-dihydroxybenzoyl)-L-serine trimer

C13716

4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate

C12218

α-D-glucosamine 1-phosphate

C1018

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

C1020

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

C12174

4-amino-2-methyl-5-pyrimidinemethanol

C13870

2-hydroxy-3-oxosuccinate

C11986

meso-tartrate

C12494

N-acetyl-D-muramate 6-phosphate

C12492

1,6-anhydro-N-acetyl-β-muramate

C1102

O-acetyl-L-serine

C13928

urea-1-carboxylate

C12364

isopentenyl diphosphate

C3353

(4S)-4-hydroxy-2-oxoheptanedioate

C13672

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

C3269

(S)-4-hydroxy-2-oxopentanoate

C3279

2-oxopent-4-enoate

C1002

anthranilate

C11606

thiamine phosphate

C1182

N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide

C1180

N1-(5-phospho-β-D-ribosyl)glycinamide

C3307

6-amino-2-oxohexanoate

C352

2-iminoacetate

C12256

ethylamine

C689

N-ethylglycine

C11982

methylamine

C12350

7,8-diaminopelargonate

C1078

(S)-2-amino-6-oxohexanoate

C1130

8-amino-7-oxononanoate

C3264

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

C12355

dethiobiotin

C15056

salicyl alcohol

C3656

D-gluconate 6-phosphate

C12394

6-phospho D-glucono-1,5-lactone

C11493

2-phosphoglycolate

C188

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

C194

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

C11486

γ-butyrobetaine

C1108

acetyl phosphate

C4037

presqualene diphosphate

C4201

squalene

C14005

prephytoene diphosphate

C11737

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

C949

lipid X

C11836

hydroxypyruvate

C3850

5-amino-6-(D-ribitylamino)uracil

C12164

H2

C14935

sym-homospermidine

C14177

propane-1,3-diamine

C1631

3-amino-1-hydroxyacetone 1-phosphate

C5991

3-keto-β-D-galactose

C13738

cis-coumarinic acid-β-D-glucoside

C11662

scopolin

C1297

4-hydroxybenzaldehyde

C451

4-methylumbelliferyl glucoside

C1172

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

C12402

cyclohex-1,5-diene-1-carbonyl-CoA

C1155

6-hydroxycyclohex-1-ene-1-carbonyl-CoA

C1171

2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine

C14003

N-acetyl-L-glutamate 5-semialdehyde

C12214

(S)-4-amino-5-oxopentanoate

C14933

quercetin 3-sulfate

C11735

quercetin-3,3'-bissulfate

C13854

hydrogen selenide

C14218

L-β-lysine

C6614

O-ureido-L-homoserine

C7865

urea

C13681

5-carboxymethyl-2-hydroxymuconate

C11639

succinate semialdehyde

C12254

ethanolamine

C524

6-chloro-2-hydroxy-4-carboxymuconate-6-semialdehyde

C13610

4-carboxy-2-hydroxymuconate-6-semialdehyde

C14874

2-pyrone-4,6-dicarboxylate

C14204

2-hydroxy-4-carboxymuconate semialdehyde hemiacetal

C11748

pseudouridine 5'-phosphate

C3821

5-methylcytosine

C11869

N2-succinylglutamate

C13638

N2-succinyl-L-glutamate 5-semialdehyde

C12146

hydroxylamine

C1024

aminoacetone

C12351

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

C6361

acetoacetate

C12326

1-deoxy-L-glycero-tetrulose 4-phosphate

C10274

5-amino-6-(5-phospho-D-ribosylamino)uracil

C3829

5-amino-6-(5-phospho-D-ribitylamino)uracil

C11988

mesaconate

C11826

oxalosuccinate

C11711

(R)-1-amino-2-propanol O-2-phosphate

C14152

pyruvic oxime

C14075

N2-succinyl-L-arginine

C11868

N2-succinyl-L-ornithine

C13986

pseudouridine

C15156

dialurate

C927

carbon monoxide

C1548

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

C623

(3S,5S)-3,5-diaminohexanoate

C15181

(S)-5-amino-3-oxohexanoate

C1357

3-oxopimeloyl-CoA

C1399

3-hydroxypimeloyl-CoA

C1148

6-oxocyclohex-1-ene-1-carbonyl-CoA

C15180

2-hydroxy-6-oxocyclohexane-1-carbonyl-CoA

C11557

urocanate

C1285

4-imidazolone-5-propanoate

C1417

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

C3376

(S)-4-hydroxy-2-oxohexanoate

C193

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

C187

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

C186

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

C185

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

C183

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

C184

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

C1550

2-amino-3-carboxymuconate-6-semialdehyde

C1186

5-oxo-L-proline

C6030

core oligosaccharide-lipid A (E. coli K-12 core type)

C12848

N5-carboxyaminoimidazole ribonucleotide

C4688

glutathioselenol

C4690

selenodiglutathione

C12630

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

C12628

2-oxepin-2(3H)-ylideneacetyl-CoA

C12626

3-oxo-5,6-didehydrosuberyl-CoA

C12415

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

C13955

octadecanal

C12046

L-gulono-1,4-lactone

C14156

L-xylo-hex-3-ulono-1,4-lactone

C13983

α-D-galacturonate 1-phosphate

C12054

L-dehydro-ascorbate

C1291

(4-hydroxyphenyl)acetate

C1223

5-aminopentanoate

C13702

1-piperideine 6-carboxylate

C12367

1-piperideine-2-carboxylate

C1271

4-oxoglutaramate

C158

cyclic-2,3-O-oxalyl-L-threonate

C163

dehydroascorbate (bicyclic form)

C435

bisorganyltrisulfane

C12274

enol-phenylpyruvate

C162

cyclic- 3,4-O-oxalyl-L-threonate

C14153

2,3-dioxo-L-gulonate

C159

2-carboxy-L-xylonolactone

C160

2-carboxy-L-threo-pentonate

C11520

hypoglycin B

C3536

L-α-amino-ε-keto-pimelate

C5583

L-methionine

C5612

L-cysteine

C12067

glycine

C5575

L-tryptophan

C5597

L-alanine

C5581

L-proline

C5571

L-valine

C5603

L-isoleucine

C5588

L-leucine

C2469

L-phenylalanine

C5592

L-selenocysteine

C5642

L-arginine

C5643

L-asparagine

C5607

L-glutamate

C5596

L-aspartate

C5579

L-serine

C5584

L-lysine

C5609

L-glutamine

C5605

L-histidine

C12073

L-aspartyl-4-phosphate

C5595

L-cystathionine

C5580

L,L-diaminopimelate

C5577

L-threonine

C5573

L-tyrosine

C12231

L-ornithine

C5601

L-isoglutamine

C13322

N-carbamoyl-L-aspartate

C5478

N-formyl-L-glutamate

C5476

formyl-L-isoglutamine

C14988

N-acetyl-L-citrulline

C15000

N-acetyl-L-ornithine

C5466

N-formimino-L-glutamate

C12303

L-citrulline

C12203

S-adenosyl-L-homocysteine

C15292

S-adenosyl-L-methionine

C12247

L-homocysteine

C12245

L-homoserine

C12229

O-phospho-L-homoserine

C12239

L-aspartate 4-semialdehyde

C12261

hypoglycin A

C12227

O-succinyl-L-homoserine

C12233

L-glutamate-5-semialdehyde

C12293

3-sulfino-L-alanine

C2426

S-sulfo-L-cysteine

C12237

L-canaline

C12241

L-4-hydroxyglutamate semialdehyde

C5585

meso-diaminopimelate

C12063

seleno-L-homocysteine

C12201

L-2-amino-3-oxobutanoate

C11955

O-acetyl-L-homoserine

C14973

N-acetyl-L-glutamate

C14976

N-acetyl-L-methionine

C3628

sarcosine

C6532

(2S, 3S)-3-methylaspartate

C3402

3-phospho-L-serine

C8799

D-alanine

C8797

D-glutamate

C8807

D-lysine

C11441

β-alanine

C11435

(R)-β-lysine

C11433

(S)-3-amino-2-methylpropanoate

C7757

ADP

C7844

ATP

C7811

XMP

C7745

GTP

C5552

5'-deoxyadenosine

C7809

AMP

C7827

GMP

C5485

1-(5-phospho-β-D-ribosyl)-ATP

C7795

GDP

C10288

adenylo-succinate

C7741

IMP

C7823

dADP

C7807

dGDP

C7743

dAMP

C7783

dATP

C7840

dGMP

C7751

dGTP

C7759

ITP

C7817

IDP

C5489

1-(5-phospho-β-D-ribosyl)-AMP

C7652

cyclic-AMP

C7749

dITP

C7747

dIDP

C7785

hypoxanthine

C7755

2'-deoxyinosine

C7813

2'-deoxyadenosine

C7848

2'-deoxyguanosine

C7649

isoguanine

C7647

8-oxo-dGTP

C7655

8-oxo-GTP

C2151

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

C10263

ADP-α-D-glucose

C1015

GDP-α-D-glucose

C1043

GDP-4-dehydro-α-D-rhamnose

C1009

GDP-α-D-mannose

C10343

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C8423

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C1896

dTDP-4-dehydro-β-L-rhamnose

C1930

dTDP-β-L-rhamnose

C1939

dTDP-α-D-glucose

C7742

UDP-N-acetyl-α-D-muramoyl-L-alanine

C7822

UDP-N-acetyl-α-D-muramate

C7808

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

C7782

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

C8666

UDP-α-D-galactose

C7780

UDP-α-D-glucose

C7814

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

C7734

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

C7824

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

C7776

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

C5849

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

C7722

UDP-α-D-glucuronate

C7790

UDP-N-acetyl-α-D-mannosamine

C7804

UDP-α-D-galactofuranose

C7764

UDP-α-D-galacturonate

C7444

UDP-N-acetyl-α-D-glucosamine

C5150

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

C8547

UDP-N-acetyl-α-D-mannosaminuronate

C5090

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C5094

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C5848

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C8305

CMP-3-deoxy-β-D-manno-octulosonate

C6744

CMP-N-acetyl-β-neuraminate

C9454

adenine

C8739

uracil

C10601

thymine

C8707

cytosine

C9540

preQ1

C8755

dCMP

C8770

dUMP

C8744

dTMP

C8733

dCDP

C8752

dUDP

C8720

dTDP

C8772

dCTP

C8724

dUTP

C8764

dTTP

C8714

UDP

C8732

CDP

C9443

2-methylsulfanyl-N6-dimethylallyladenosine37 in tRNA

C9444

2-sulfanyl-N6-dimethylallyladenosine37 in tRNA

C4243

β-nicotinamide D-ribonucleotide

C8760

UTP

C8761

CTP

C2245

CMP

C2241

UMP

C10280

5-hydroxy-CMP

C10290

5-hydroxy-CTP

C10284

2-hydroxy-dATP

C4018

NADP+

C4020

NAD+

C14497

NADPH

C14500

NADH

C15088

adenosine

C15085

guanosine

C15091

inosine

C15094

xanthosine

C2702

cytidine

C2706

uridine

C6945

5-fluorouracil

C9773

5-fluorocytosine

C11485

D-gluconate

C3679

L-gulonate

C3678

aldehydo-L-galactonate

C4086

1-(β-D ribofuranosyl)nicotinamide

C11619

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

C11627

3'-ketolactose

C13376

lotaustralin

C8669

methyl β-D-glucoside 6-phosphate

C10331

salicin 6-phosphate

C10334

arbutin-6-phosphate

C13392

linamarin

C13404

neolinustatin

C13380

linustatin

C13426

taxiphyllin

C10338

5-phospho-α-D-ribose 1-diphosphate

C10350

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

C10340

D-erythrose 4-phosphate

C15289

D-sedoheptulose 7-phosphate

C10356

4-phospho-D-erythronate

C10342

D-sedoheptulose 1,7-bisphosphate

C8811

α-D-glucopyranose 1-phosphate

C8815

α-D-galactose 1-phosphate

C8813

α-D-mannose 1-phosphate

C3186

N-acetyl-α-D-glucosamine 1-phosphate

C2082

β-D-fructofuranose 1-phosphate

C2129

β-D-glucopyranose 1-phosphate

C10326

β-D-fructose 1,6-bisphosphate

C2989

β-D-fructofuranose 6-phosphate

C15303

D-fructose 6-phosphate

C2125

α-D-glucose 6-phosphate

C2123

β-D-glucose 6-phosphate

C6717

α-D-mannopyranose 6-phosphate

C6719

β-D-mannopyranose 6-phosphate

C2057

α-D-ribose-1-phosphate

C8708

1-deoxy-D-xylulose 5-phosphate

C8704

D-xylulose 5-phosphate

C10604

D-ribulose 5-phosphate

C8700

aldehydo-D-arabinose 5-phosphate

C5615

D-glyceraldehyde 3-phosphate

C6669

N-monoacetylchitobiose 6'-phosphate

C6673

sucrose 6F-phosphate

C6671

N,N'-diacetylchitobiose 6'-phosphate

C6579

β-D-cellobiose 6'-phosphate

C3137

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C3138

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

C973

D-ribulose-1,5-bisphosphate

C10374

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

C10362

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

C10379

a peptidoglycan dimer (E. faeciums)

C10372

a peptidoglycan dimer (S. aureus)

C10381

a peptidoglycan dimer (mycobacteria)

C5529

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

C3120

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C3131

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C3122

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C3127

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

C3126

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

C361

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

C13230

a peptidoglycan dimer (meso-diaminopimelate containing)

C10383

a peptidoglycan with L,D cross-links (mycobacteria)

C10364

a peptidoglycan with D,D cross-links (mycobacteria)

C14587

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

C14591

a peptidoglycan with D,D cross-link (S. aureus)

C8835

β-D-fructofuranose

C2858

glycolaldehyde

C2065

aldehydo-D-ribose

C2062

β-D-ribofuranose

C2061

α-D-ribofuranose

C2108

β-D-galactopyranose

C2109

α-D-galactopyranose

C7085

β-D-glucopyranose

C7087

α-D-glucopyranose

C9494

D-glyceraldehyde

C15288

N-acetylmuramate

C9477

N-acetyl-α-D-muramoyl-L-alanine(1-)

C13570

N-acetyl-β-D-mannosamine

C14474

N-acetyl-α-D-mannosamine

C5286

N-acetyl-β-D-glucosamine

C4960

N-acetyl-β-neuraminate

C3731

glycerol

C3694

XXXG xyloglucan oligosaccharide

C6917

β-D-cellobiose

C10688

maltotriose

C10234

(heptosyl)2-Kdo2-lipid A

C10235

heptosyl-Kdo2-lipid A

C10224

α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A

C10223

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IVA

C10226

α-Kdo-(2→6)-lipid IVA

C10233

glucosyl-(heptosyl)2-Kdo2-lipid A

C10232

glucosyl-(heptosyl)2-Kdo2-lipid A-phosphate

C10231

glucosyl-(heptosyl)3-Kdo2-lipid A-phosphate

C10230

glucosyl-(heptosyl)3-Kdo2-lipid A-bisphosphate

C10229

galactosyl-glucosyl-(heptosyl)3-Kdo2-lipid A-bisphosphate

C10228

galactosyl-(glucosyl)2-(heptosyl)3-Kdo2-lipid A-bisphosphate

C6026

galactosyl-(glucosyl)3-(heptosyl)3-Kdo2-lipid A-bisphosphate

C10693

sucrose

C10694

melibiose

C10754

allolactose

C6821

α-lactose

C10690

maltopentaose

C10691

maltohexaose

C10689

maltotetraose

C10692

maltoheptaose

C6899

stachyose

C5727

raffinose

C3685

XLLG xyloglucan oligosaccharide

C3687

XLXG xyloglucan oligosaccharide

C3689

XXLG xyloglucan oligosaccharide

C2021

aldehydo-D-galacturonate

C6829

salicylaldehyde

C10621

4-methylumbelliferone

C4615

scopoletin

C4655

coumarin

C4221

(3S)-2,3-epoxy-2,3-dihydrosqualene

C9304

trans,octacis-decaprenyl phosphate

C9077

(2E,6E)-farnesyl diphosphate

C9075

mono-trans,octa-cis-decaprenyl diphosphate

C10874

apo-4'-lycopenal

C10864

all-trans-phytoene

C10862

15-cis-phytoene

C5001

apo-4'-lycopenoate

C670

ferric-[N-(2,3-dihydroxybenzoyl)-L-serine trimer] complex

C9625

vanillylamine

C5133

(3R)-hydroxy-nonanoyl-CoA

C5125

2-trans-nonenoyl-CoA

C5127

(3R)-hydroxy, 4-trans-undecenoyl-CoA

C5128

2-trans, 4-trans-undecadienoyl-CoA

C5144

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

C5117

2-trans-6-trans-tridecadienoyl-CoA

C5135

(3R)-hydroxy-undecanoyl-CoA

C5137

(3E)-undec-2-enoyl-CoA

C5143

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

C5123

2-trans,6-cis-tridecadienoyl-CoA

C5139

(3E)-undec-3-enoyl-CoA

C5141

2-trans, 4-cis-undecadienoyl-CoA

C5154

(3E)-tetradec-3-enoyl-CoA

C5156

(2E,4E)-tetradeca-2,4-dienoyl-CoA

C4420

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

C4553

3-octaprenyl-4-hydroxybenzoate

C8322

di-trans,octa-cis-undecaprenyl phosphate

C1810

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

C1813

di-trans,octa-cis-undecaprenyl diphosphate

C5383

all-trans-octaprenyl diphosphate

C5378

geranylgeranyl diphosphate

C3117

dioleoyl phosphatidate

C2765

1-oleoyl-2-lyso-glycerone phosphate

C5639

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

C6241

1-oleoyl-sn-glycerol 3-phosphate

C10025

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

C2903

hydroquinone

C11421

protocatechuate

C2760

3,4-dihydroxyphenylacetate

C2762

3,4-dihydroxymandelate

C2758

3,4-dihydroxyphenylglycolaldehyde

C3450

ethanol

C3448

methanol

C2824

(2E,6E)-farnesal

C6090

methylglyoxal

C3649

benzaldehyde

C14804

phytenal

C3500

acetaldehyde

C3529

1-octanal

C3483

formaldehyde

C3523

1-propanal

C10048

caldariellaquinone

C2040

diacetyl

C3288

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

C3358

(1E)-4-oxobut-1-ene-1,2,4-tricarboxylate

C3359

2-hydroxy-4-oxobutane-1,2,4-tricarboxylate

C3301

2-oxoglutarate

C3308

pyruvate

C3257

2-oxobutanoate

C3351

glyoxylate

C3337

5-chloro-4-hydroxy-2-oxopentanoate

C3086

4-(methylsulfanyl)-2-oxobutanoate

C3345

3-phenyl-2-oxopropanoate

C3315

3-(4-hydroxyphenyl)pyruvate

C11416

5-chloroprotocatechuate

C11429

salicylate

C8974

4-aminobenzoate

C8968

benzoate

C11481

orotate

C11482

(R)-pantoate

C11517

acetate

C11515

L-carnitine

C11510

5-chloro-5-deoxy-D-ribonate

C4985

(S)-1-pyrroline-5-carboxylate

C2047

aldehydo-D-glucuronate

C2774

pristanate

C3383

palmitate

C3409

octanoate

C3412

decanoate

C3418

butanoate

C13210

oleate

C6379

linoleate

C10572

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

C10590

α-linolenate

C13298

(3E,5Z)-tetradecadienoate

C13260

phytenate

C13266

(15Z)-tetracosenoate

C523

(2E,6E)-farnesoate

C3421

formate

C3420

propanoate

C6185

(R)-lactate

C13457

(1E,3E)-4-hydroxybuta-1,3-diene-1,2,4-tricarboxylate

C11476

(R)-glycerate

C8534

cis-aconitate

C8538

(2R)-homocitrate

C8555

cis-homoaconitate

C8531

D-threo-isocitrate

C8950

chorismate

C8919

D-glucarate

C6443

fumarate

C6442

succinate

C2802

(S)-malate

C6934

4-hydroxybenzoate

C3093

urate

C2569

coumarinate

C2584

ferulate

C4356

quercetin

C6043

4-methylphenol

C1869

caldariellaquinol

C1868

3-demethylubiquinol-9

C1867

3-demethylubiquinol-8

C1865

3-demethylubiquinol-7

C1866

3-demethylubiquinol-10

C1863

demethylmenaquinol-8

C5551

ubiquinol-9

C5543

ubiquinol-8

C5559

ubiquinol-6

C5535

ubiquinol-7

C5563

ubiquinol-10

C8413

indole

C8335

(indol-3-yl)acetaldehyde

C7694

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

C8491

vanillyl mandelate

C13422

hydrogen cyanide

C13354

preQ0

C13366

(indole-3-yl)acetonitrile

C13382

acrylonitrile

C13330

(2R)-2-hydroxy-2-methylbutanenitrile

C4190

2-hydroxy-2-methylpropanenitrile

C2631

2-hydroxychromene-2-carboxylate

C14603

tetrahydromethanopterin

C5590

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

C12730

7,8-dihydroneopterin 3'-triphosphate

C12678

7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate

C12680

(7,8-dihydropterin-6-yl)methyl diphosphate

C12728

6-(hydroxymethyl)-7,8-dihydropterin

C12696

7,8-dihydromonapterin

C12664

7,8-dihydroneopterin

C12708

7,8-dihydroneopterin 3'-phosphate

C10609

7,8-dihydropteroate

C7129

5,6,7,8-tetrahydrofolate

C7134

tetrahydropteroyl tri-L-glutamate

C8565

5-methyltetrahydropteroyl mono-L-glutamate

C8566

5-methyltetrahydropteroyl tri-L-glutamate

C414

10-formyl-tetrahydrofolate mono-L-glutamate

C6250

5,10-methylenetetrahydropteroyl mono-L-glutamate

C4599

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

C14615

N5-methyltetrahydromethanopterin

C10597

7,8-dihydrofolate monoglutamate

C10595

N10-formyldihydrofolate

C10052

FMN

C10988

riboflavin

C10053

FAD

C10049

FMNH2

C15044

reduced riboflavin

C10050

FADH2

C1659

6,7-dimethyl-8-(1-D-ribityl)lumazine

C9861

cobyrinate

C1705

sirohydrochlorin

C2311

precorrin-2

C2305

precorrin-1

C9818

cobalt-precorrin-6A

C9813

cobalt-precorrin-5B

C2308

precorrin-6A

C2317

precorrin-6B

C2297

precorrin-8x

C2323

precorrin-7

C2302

precorrin-3A

C2314

precorrin-3B

C2320

precorrin-4

C2300

precorrin-5

C9871

cobalt-precorrin-5A

C9847

cobalt-precorrin-4

C9842

cobalt-precorrin-6B

C9866

cobalt-precorrin-8

C9837

cobalt-precorrin-7

C9822

cobalt-precorrin-3

C5221

adenosylcobalamin

C9874

cob(I)alamin

C10982

nicotinate

C10996

nicotinamide

C10986

L-ascorbate

C10994

thiamine

C4210

pyridoxal 5'-phosphate

C4188

pyridoxamine 5'-phosphate

C4214

pyridoxine 5'-phosphate

C4200

pyridoxal

C4216

pyridoxamine

C4208

pyridoxine

C10614

coenzyme A

C10615

methyl-CoM

C12629

coenzyme M

C2239

oxidized coenzyme F420-2

C5394

(R)-NADHX

C5392

(S)-NADHX

C2598

D-glucono-1,5-lactone

C10100

trans-dienelactone

C10102

cis-dienelactone

C10076

L-galactono-1,4-lactone

C4901

succinyl-CoA

C4913

malonyl-CoA

C5298

acetyl-CoA

C4911

methylacrylyl-CoA

C5279

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

C5278

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

C5274

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

C5272

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

C5266

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

C5265

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

C5308

(3S)-hydroxyadipyl-CoA

C5285

(E)-2-methylcrotonoyl-CoA

C5315

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

C5310

3-hydroxyisovaleryl-CoA

C5314

2-methylacetoacetyl-CoA

C4937

3'-dephospho-CoA

C5056

linoleoyl-CoA

C4915

α-linolenoyl-CoA

C4945

(2E,5Z)-tetradecenoyl-CoA

C5282

itaconyl-CoA

C4917

L-carnitinyl-CoA

C4931

γ-butyrobetainyl-CoA

C5294

benzoyl-CoA

C4935

trans-feruloyl-CoA

C5035

4-hydroxybenzoyl-CoA

C4924

glutaryl-CoA

C2242

(S)-3-aminobutanoyl-CoA

C5014

phenylacetyl-CoA

C4941

crotonobetainyl-CoA

C4922

isobutanoyl-CoA

C5313

2-methylbutanoyl-CoA

C11197

(S)-3-hydroxy-isobutanoyl-CoA

C5635

oleoyl-CoA

C10758

3-oxoadipyl-CoA

C2008

acetoacetyl-CoA

C2009

3-oxopentanoyl-CoA

C6562

hexadecanedioyl-CoA

C5892

palmitoyl-CoA

C2873

pristanoyl-CoA

C14697

decanoyl-CoA

C14677

octanoyl-CoA

C1177

propanoyl-CoA

C1175

butanoyl-CoA

C7162

cerotoyl-CoA

C7169

2-carboxy-cerotoyl-CoA

C7168

(Z)-15-tetracosenoyl-CoA

C10775

(S)-3-hydroxybutanoyl-CoA

C10774

(3R)-3-hydroxybutanoyl-CoA

C7353

(S)-3-hydroxydecanoyl-CoA

C5879

(3R)-3-hydroxyoctadecanoyl-CoA

C6059

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

C15307

(S)-3-hydroxyoctanoyl-CoA

C7343

(S)-malyl-CoA

C11400

phytenoyl-CoA

C4309

(2E)-dec-2-enoyl-CoA

C4299

(2E)-oct-2-enoyl-CoA

C4300

trans-Δ2, cis-Δ4-decadienoyl-CoA

C6146

(2E)-octadec-2-enoyl-CoA

C1337

crotonyl-CoA

C5920

(R)-methylmalonyl-CoA

C5919

(S)-methylmalonyl-CoA

C12545

ethene

C9096

(indol-3-yl)acetate

C11480

phenylacetate

C4572

(25S)-3-oxocholest-4-en-26-oyl-CoA

C4520

(25S)-3-oxocholest-4-en-26-oate

C10542

androst-4-ene-3,17-dione

C10538

androsta-1,4-diene-3,17-dione

C10545

9α-hydroxyandrosta-1,4-diene-3,17-dione

C10544

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

C10548

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

C6178

heptadecane

C8043

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

C8033

5-amino-4-imidazolecarboxyamide

C8039

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

C8014

phosphoribulosylformimino-AICAR-phosphate

C8025

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

C7869

acetamide

C11251

(S)-2-chloropropanoate

C11222

sn-glycero-3-phosphoethanolamine

C11221

sn-glycero-3-phosphocholine

C11219

glycerophosphoserine

C11220

glycerophosphoglycerol

C2179

choline

C10301

agmatine

C3548

putrescine

C3574

spermidine

C3576

cadaverine

C6524

2-aminoprop-2-enoate

C6708

2-iminopropanoate

C6526

(2Z)-2-aminobut-2-enoate

C7014

sulfate

C7036

hydrogencarbonate

C7020

selenate

C7016

sulfite

C7028

nitrite

C7030

nitrate

C7034

hydrogensulfite

C7025

OH-

C7052

trithionate

C7024

thiosulfate

C7062

tetrathionate

C8958

superoxide

C7022

selenide

C7017

selenite

C7006

chloride

C6097

phosphate

C6093

diphosphate

C6094

triphosphate

C7864

Fe3+

C4320

H+

C4318

K+

C4328

ammonium

C11006

Co2+

C11023

Fe2+

C1689

trimethyl sulfonium

C4742

3-dimethylsulfoniopropionaldehyde

C4734

dimethyl sulfide

C4678

glutathione

C12637

3-sulfopyruvate

C12587

L-cysteate

C5753

4-methyl-5-(2-phosphooxyethyl)thiazole

C5750

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

C5759

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

C5744

5-(2-hydroxyethyl)-4-methylthiazole

C3998

methanethiol

C4644

S-sulfanylglutathione

C4658

2,4-dinitrophenyl-S-glutathione

C13114

1-chloro-2,4-dinitrobenzene

C8962

nitric oxide

C8965

hydroxyl radical

C8959

monodehydroascorbate radical

C6287

2-octaprenylphenol

C6290

(S)-3-hydroxy-isobutanoate

C6317

5,10-methenyltetrahydrofolate mono-L-glutamate

C6741

(S)-methylmalonate-semialdehyde

C6763

(R)-methylmalonate-semialdehyde

C6757

(S)-citramalate

C6663

N-acetyl-β-neuraminate 9-phosphate

C6617

N-acetyl-D-mannosamine 6-phosphate

C2017

α-D-glucosamine 6-phosphate

C2150

(2R)-2,3-dihydroxy-3-methylbutanoate

C6437

3-phospho-D-glyceroyl-phosphate

C6427

2,3-diphospho-D-glycerate

C6438

3-phospho-D-glycerate

C6425

2-phospho-D-glycerate

C8419

sn-glycerol 3-phosphate

C7121

oxygen

C7118

hydrogen sulfide

C7126

S0

C7676

protoporphyrin IX

C7658

uroporphyrinogen-III

C7672

coproporphyrinogen I

C7662

uroporphyrinogen-I

C7666

protoporphyrinogen IX

C6624

protoheme

C7116

nitrous oxide

C2255

N2

C9828

cob(II)yrinate a,c-diamide

C9853

adenosyl-cob(III)yrinate a,c-diamide

C9823

cob(I)yrinate a,c-diamide

C9807

adenosylcobinamide

C9869

cob(I)inamide

C9830

adenosylcobinamide-GDP

C9855

adenosyl-cobinamide phosphate

C1218

adenosylcobalamin 5'-phosphate

C9811

cob(II)yrinate c-monoamide

C9800

adenosylcobyrate

C9845

cobalt-sirohydrochlorin

C9821

cobalt-factor III

C10799

DNA with lesion

C4632

(glutathion-S-yl)-4-hydroxy-2-nonenal

C8498

N-acetyl-L-glutaminyl-L-glutamine amide

C8496

N-acetyl-L-glutaminyl-L-glutamine

C1328

L-cysteinylglycine

C8518

γ-L-glutamyl-L-cysteine

C1434

D-alanyl-D-alanine

C2562

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

C2576

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

C6596

2-iminosuccinate

C6599

2-iminobutanoate