an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

4,4'-dihydroxy-3,3'-dimethoxystilbene

vanillin

3-oxopropanoate

glycolate

3-β-hydroxyandrost-5-en-17-one 3-sulfate

estrone 3-sulfate

salicyl alcohol

methylsalicylate

creatinine

isochorismate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

3α,7α-dihydroxy-24-oxo-5β-cholestanoyl CoA

3-oxo-3-phenylpropanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

4-imidazolone-5-propanoate

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-phospho-β-D-ribosylamine

N¹-(5-phospho-β-D-ribosyl)glycinamide

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

2,6-dioxo-6-phenylhexa-3-enoate

succinate semialdehyde

chloroacetaldehyde

(2E)-2-hydroxypenta-2,4-dienoate

2-oxopent-4-enoate

(S)-4-hydroxy-2-oxopentanoate

acrylamide

acrylate

4-guanidinobutyramide

4-guanidinobutanoate

(indol-3-yl)acetamide

propionamide

oxaloacetate

imidazole acetaldehyde

4-imidazoleacetate

5-hydroxyindole acetaldehyde

5-hydroxyindole acetate

3-methoxy-4-hydroxyphenylglycolaldehyde

3,4-dihydroxyphenylacetaldehyde

prop-2-ynal

propynoate

D-glucurono-6,3-lactone

dimethylsulfoniopropanoate

phosphoenolpyruvate

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

2-C-methyl-D-erythritol 4-phosphate

carbonic acid

(R)-4'-phosphopantothenate

4-aminobutanoate

(R)-pantothenate

4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate

hydrogen selenide

O-acetyl-L-serine

3-methyl-2-oxobutanoate

(2S)-2-isopropylmalate

1,2-dichloroethane

2-chloroethanol

(3R,6R)-1,3,4,6-tetrachlorocyclohexa-1,4-diene

(1S,4R)-2,4,5-trichloro-2,5-cyclohexadiene-1-diol

(1S,4S)-2,5-dichloro-2,5-cyclohexadiene-1,4-diol

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

imidazole acetol-phosphate

L-histidinol phosphate

DNA without lesion

(S)-mandelate

(R)-mandelate

prephenate

ethanolamine

acetoacetate

CO₂

hydrogen peroxide

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

N²-succinyl-L-glutamate 5-semialdehyde

N²-succinylglutamate

4-acetamidobutanal

4-acetamidobutanoate

(E)-2-benzylidenesuccinyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

(E)-4-coumaroyl-CoA

2,3-didehydroadipyl-CoA

2-oleoylglycerol

H₂O

α, α'-trehalose 6,6'-bismycolate

D-mannopyranosyl-1-phosphoheptaprenol

4-oxo-4-(pyridin-3-yl)butanal

4-oxo-4-(3-pyridyl)-butanoate

pseudooxynicotine

N-methylmyosmine

6-hydroxy-3-succinoyl-pyridine

2,5-dihydroxypyridine

N-formylmaleamate

maleamate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

1-deoxy-L-glycero-tetrulose 4-phosphate

oxidized DCPIP

reduced DCPIP

methylamine

pseudouridine

(R)-4'-phosphopantothenoyl-L-cysteine

5,6-dimethylbenzimidazole

dialurate

(R)-1-amino-2-propanol O-2-phosphate

2-amino-3-carboxymuconate-6-semialdehyde

S-ribosyl-L-homocysteine

autoinducer 2

selenodiglutathione

glutathioselenol

hydroxypyruvate

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-D-muramate 6-phosphate

α-D-glucosamine 1-phosphate

glutathione disulfide

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

(S)-4-hydroxy-2-oxohexanoate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

3-oxo-5,6-didehydrosuberyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

carbon monoxide

4-amino-2-methyl-5-pyrimidinemethanol

L-3-cyclohex-2'-enylalanine

3-[(1S)-cyclohex-3-en-1-yl)]-2-oxopropanoate

3-(cyclohexa-1,3-dien-1-yl)-2-oxopropanoate

dehydroprephenate

(4S)-4-hydroxy-2-oxoheptanedioate

5-oxo-L-proline

selenophosphate

ammonia

2-iminoacetate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

preuroporphyrinogen

porphobilinogen

(S)-4-amino-5-oxopentanoate

5-aminolevulinate

1,4-dihydroxy-2-naphthoate

S-methyl-5'-thioadenosine

S-methyl-5-thio-α-D-ribose 1-phosphate

2-succinylbenzoate

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

1,4-dihydroxy-2-naphthoyl-CoA

muconolactone

(+)-muconolactone

cis,cis-muconate

cyanate

2-O-(6-phospho-α-D-mannosyl)-D-glycerate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-phosphooxy-L-threonine

itaconate

arsenite

(25S)-3α,7α-dihydroxy-5β-cholestanoyl-CoA

N-succinyl-L,L-2,6-diaminopimelate

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

dihydrolipoamide

S-acetyldihydrolipoamide

γ-L-glutamyl 5-phosphate

β-nicotinate D-ribonucleotide

nicotinate adenine dinucleotide

3'-phosphoadenylyl-sulfate

(salicyl)adenylate

2-dehydropantoate

2-(α-hydroxyethyl)thiamine diphosphate

(S)-3-methyl-2-oxopentanoate

α-ribazole

α-ribazole 5'-phosphate

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

enol-phenylpyruvate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

5-hydroxyindole thiazolidine carboxylate

(3E)-2-oxopent-3-enoate

isopentenyl diphosphate

1-piperideine 6-carboxylate

phloretin

pinocembrin chalcone

N-acetylglutamyl-phosphate

O-ureido-L-homoserine

L-arginino-succinate

canavaninosuccinate

L-canavanine

pseudouridine 5'-phosphate

5-hydroxytryptophol

indole-3-glycol

indole-3-glycol aldehyde

isobutanol

3-methylbutanol

3-methylbutanal

2-methylbutanol

2-methylbutanal

2-phenylethanol

phenyl phosphate

2-hydroxyformononetin

(3R)-sophorol

2'-hydroxypseudobaptigenin

pyrazine-2-carboxylate

N-(5-phosphoribosyl)-anthranilate

anthranilate

D-erythro-imidazole-glycerol-phosphate

histidinal

histidinol

quinolinate

dethiobiotin

pimeloyl-CoA

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

8-amino-7-oxononanoate

(S)-2-amino-6-oxohexanoate

7,8-diaminopelargonate

D-gluconate 6-phosphate

5-amino-6-(D-ribitylamino)uracil

orotidine 5'-phosphate

(S)-dihydroorotate

carbamoyl phosphate

3-deoxy-D-arabino-heptulosonate 7-phosphate

3-dehydroquinate

shikimate

3-dehydroshikimate

citrate

4-amino-4-deoxychorismate

coproporphyrinogen III

prenyl diphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

H₂

urea

urea-1-carboxylate

4'-phosphopantetheine

thiamine phosphate

thiamine diphosphate

2-isopropylmaleate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(4Z)-2-oxohept-4-enedioate

N-acetyl-L-glutamate 5-semialdehyde

(2S)-4-acetamido-2-aminobutanoate

ectoine

phthalate

phthalate 4,5-cis-dihydrodiol

3-phenylpropanoate

3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)propanoate

(2E)-3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)prop-2-enoate

(2R,3S)-3-isopropylmalate

(2S)-2-isopropyl-3-oxosuccinate

4-methyl-2-oxopentanoate

3-ethylmalate

2-oxovalerate

(R)-2,3-dihydroxy-3-methylpentanoate

veratraldehyde

3-phosphooxypyruvate

2-methyl-1,4-benzoquinone

methyl-1,4-benzoquinol

shikimate 3-phosphate

5-enolpyruvoyl-shikimate 3-phosphate

acetyl phosphate

6-phospho D-glucono-1,5-lactone

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

glycerone phosphate

xanthine

N-phenylhydroxylamine

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

hydrogenobyrinate

hydrogenobyrinate a,c-diamide

oxalosuccinate

DNA with lesion

phenylacetate

adenosyl-cob(III)yrinate a,c-diamide

adenosylcobyrate

cobalt-factor III

cobalt-precorrin-3

cobalt-sirohydrochlorin

cobalt-precorrin-7

cobalt-precorrin-8

cobalt-precorrin-6B

cobalt-precorrin-5B

cobalt-precorrin-6A

cobalt-precorrin-4

cobalt-precorrin-5A

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

3,8-divinyl protochlorophyllide a

magnesium-protoporphyrin IX 13-monomethyl ester

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

chlorophyllide a

protochlorophyllide a

adenosyl-cobinamide phosphate

adenosylcobinamide-GDP

adenosylcobalamin 5'-phosphate

Mg-protoporphyrin

cob(I)alamin

adenosylcobalamin

cob(I)yrinate a,c-diamide

cob(I)inamide

adenosylcobinamide

cob(II)yrinate c-monoamide

cob(II)yrinate a,c-diamide

cobyrinate

protoheme

hydrogen cyanide

N₂

nitrous oxide

protoporphyrinogen IX

uroporphyrinogen-I

coproporphyrinogen I

uroporphyrinogen-III

protoporphyrin IX

hydrogen sulfide

oxygen

2-chloroacetate

trans,octacis-decaprenylphospho-β-D-erythro-pentofuranosid-2-ulose

trans,octacis-decaprenylphospho-β-D-ribofuranose

trans,octacis-decaprenylphospho-β-D-ribofuranose 5-phosphate

β-D-galactofuranosyl-(1→4)-α-L-rhamnopyranosyl-(1→3)-N-acetyl-α-D-glucosaminyl-diphospho-trans,octacis-decaprenol

α-L-rhamnopyranosyl-(1→3)-N-acetyl-α-D-glucosaminyl-diphospho-trans,octacis-decaprenol

N-acetyl-α-D-glucosaminyl-diphospho-trans,octacis-decaprenol

sn-glycerol 3-phosphate

2,3-diphospho-D-glycerate

2-O-(α-D-glucopyranosyl)-D-glycerate

2-[2-O-(α-D-mannopyranosyl)-(1→2)-α-D-glucopyranosyl]-3-phospho-D-glycerate

2-[2-O-(α-D-mannopyranosyl)-(1→2)-α-D-glucopyranosyl]-D-glycerate

3-phospho-D-glyceroyl-phosphate

2-O-(α-D-glucopyranosyl)-3-phospho-D-glycerate

(R)-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

1-oleoyl-2-lyso-glycerone phosphate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

5,10-methenyltetrahydrofolate mono-L-glutamate

3-(all-trans-octaprenyl)benzene-1,2-diol

(S)-3-hydroxy-isobutanoate

2-octaprenylphenol

2-methoxy-6-(all-trans-octaprenyl)phenol

L-cysteinylglycine

N-acetyl-L-glutaminyl-L-glutamine

N-acetyl-L-glutaminyl-L-glutamine amide

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

superoxide

nitric oxide

nitrobenzene

3-dimethylsulfoniopropionaldehyde

dimethyl sulfide

S-methyl-L-methionine

S-(hydroxymethyl)glutathione

methionol

3-(methylsulfanyl)propanal

thiocyanate

glutathione

methanethiol

S-sulfanylglutathione

5-(2-hydroxyethyl)-4-methylthiazole

4-methyl-5-(2-phosphooxyethyl)thiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

L-cysteate

3-sulfopyruvate

trimethyl sulfonium

H⁺

ammonium

Mo²⁺

Co²⁺

Fe²⁺

Mg²⁺

sulfite

nitrite

thiosulfate

selenide

hydrogencarbonate

sulfate

selenite

nitrate

selenate

hydrogensulfite

phosphate

diphosphate

triphosphate

bromide

chloride

2-aminoprop-2-enoate

2-iminopropanoate

(2Z)-2-aminobut-2-enoate

choline

sn-glycero-3-phosphocholine

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

fluoroacetaldehyde

fluoroacetate

5'-deoxy-5'-fluoroadenosine

5-fluoro-5-deoxy-D-ribose 1-phosphate

bromochloromethane

chloroethylmalonyl-CoA

4-chloro-crotonyl-CoA

4-chloro-3-hydroxybutyryl-CoA

5-chloro-5-deoxy-D-ribose

5-chloro-5-deoxy-D-ribono-γ-lactone

5-chloro-5-deoxy-D-ribonate

5-chloro-4-hydroxy-2-oxopentanoate

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

2,5-dichlorophenol

acetamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

pyrazinamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-4-imidazolecarboxyamide

nicotinamide

(25S)-3-oxocholest-4-en-26-oate

(25S)-3-oxocholest-4-en-26-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

(25S)-26-hydroxycholest-4-en-3-one

(25S)-26-oxocholest-4-en-3-one

17-hydroxy-3-oxo-4-pregnane-20-carboxyl-CoA

3-oxo-4,17-pregnadiene-20-carboxyl-CoA

22-hydroxy-3-oxochol-4-en-24-oyl-CoA

3-oxochol-4,22-dien-24-oyl-CoA

3-oxochol-4-en-24-oyl-CoA

3-oxocholest-4,24-dien-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

cholest-4-en-3-one

estrone

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

androsta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

3-β-hydroxyandrost-5-en-17-one

cholest-5-en-3-one

cholesterol

ergosta-5,7,24(28)-trien-3β-ol

episterol

(+)-7-epi-jasmonate

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

3α,7α,12α-trihydroxy-24-oxo-5-β-cholestanoyl CoA

choloyl-CoA

chenodeoxycholoyl-CoA

benzoyl-CoA

succinyl-CoA

2-methylacetoacetyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

4-hydroxybenzoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

4-cis-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

4-trans-undecenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3E)-dec-3-enoyl-CoA

malonyl-CoA

dihomo γ-linolenoyl-CoA

(+)-7-epi-jasmonoyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

acetyl-CoA

methylacrylyl-CoA

(2E,5Z)-tetradecenoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

(3S)-hydroxyadipyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-hydroxyisovaleryl-CoA

(E)-2-methylcrotonoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

2-trans-nonenoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

(3S)-3-isopropenyl-6-oxoheptanoyl-CoA

(3R)-3-isopropenyl-6-oxoheptanoyl-CoA

2-methylbutanoyl-CoA

isobutanoyl-CoA

phenylacetyl-CoA

itaconyl-CoA

(25R)-3α,7α-dihydroxy-5β-cholestanoyl-CoA

(25R)-3α,7α,12α-trihydroxy-5β-cholestanoyl-CoA

(25S)-3α,7α,12α-trihydroxy-5β-cholestanoyl-CoA

dihydro-4-coumaroyl-CoA

isovaleryl-CoA

3'-dephospho-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

γ-linolenoyl-CoA

(S)-methylmalonyl-CoA

(R)-methylmalonyl-CoA

crotonyl-CoA

phytenoyl-CoA

(2E)-octadec-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

(E)-cinnamoyl-CoA

(S)-malyl-CoA

(3Z)-dodec-3-enoyl-CoA

oleoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

cerotoyl-CoA

2-carboxy-cerotoyl-CoA

(Z)-15-tetracosenoyl-CoA

butanoyl-CoA

propanoyl-CoA

lauroyl-CoA

hexanoyl-CoA

octanoyl-CoA

decanoyl-CoA

palmitoyl-CoA

stearoyl-CoA

pristanoyl-CoA

hexadecanedioyl-CoA

3-oxoadipyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

3-oxododecanoyl-CoA

3-oxooctanoyl-CoA

3-oxo-myristoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

all-trans-retinyl palmitate

FADH₂

FMNH₂

FMN

FAD

(S)-NADHX

(R)-NADHX

NADH

NADPH

NAD⁺

NADP⁺

caldariellaquinol

ubiquinol-8

menaquinol-8

demethylmenaquinol-8

3-demethylubiquinol-8

caldariellaquinone

coenzyme A

MoO₂-molybdopterin cofactor

guanylyl molybdenum cofactor

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

nicotinate

thiamine

riboflavin

pyridoxamine

pyridoxal

pyridoxine

pyridoxine 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxal 5'-phosphate

all-trans-retinol

(S)-1-pyrroline-5-carboxylate

salinosporamide A

precorrin-1

precorrin-2

precorrin-3B

precorrin-4

precorrin-7

precorrin-8x

precorrin-6B

precorrin-5

precorrin-6A

sirohydrochlorin

9H carbazole

6,7-dimethyl-8-(1-D-ribityl)lumazine

7,8-dihydroneopterin

7,8-dihydromonapterin

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydroneopterin 3'-phosphate

7,8-dihydropteroate

guanine

adenine

2'-deoxyguanosine

2'-deoxyadenosine

2'-deoxyinosine

guanosine

xanthosine

adenosine

inosine

hypoxanthine

dAMP

dGMP

dITP

dATP

dGTP

dIDP

dADP

dGDP

GDP

ADP

IDP

AMP

IMP

XMP

GMP

GTP

ATP

ITP

dCMP

dUMP

UDP

CTP

CDP

dTTP

dCTP

orotate

UTP

dUTP

dCDP

dUDP

dTMP

dTDP

uracil

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-α-D-glucose

UDP-α-D-galactose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-β-L-arabinopyranose

UDP-N-acetyl-α-D-glucosamine

dTDP-α-D-glucose

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

cytidine

uridine

2'-deoxycytidine

2'-deoxyuridine

thymidine

thymine

CMP

UMP

2',4,4',6'-tetrahydroxychalcone

isoliquiritigenin

baicalein

6,7-dehydrobaicalein

(3R)-vestitone

acrylonitrile

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

2'-aminobiphenyl-2,3-diol

(2E,4E)-6-(2-aminophenyl)-2-hydroxy-6-oxohexa-2,4-dienoate

salicylaldehyde

actinorhodin intermediate

actinorhodin

urate

4-tyrosol

4-hydroxybenzoate

benzyl alcohol

veratryl alcohol

6-isobutyl-4-hydroxy-2-pyrone

vanillyl mandelate

3-methoxy-4-hydroxyphenylglycol

benzaldehyde

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

(indol-3-yl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-hydroxy-2-(6-oxo-1-oxaspiro[2.5]octa-4,7-dien-2-yl)-1-benzofuran-3-one

6-hydroxy-2-[hydroxy-(4-hydroxyphenyl)methyl]-1-benzofuran-3-one

2-[hydroperoxy(4-hydroxyphenyl)methyl]-6-hydroxy-1-benzofuran-3-one

2-aminophenol

4-methylphenol

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxymandelate

3,4-dihydroxyphenylacetate

biphenyl-2,3-diol

2,3-dihydroxybenzoate

catechol

3,4-dihydroxyphenylglycol

protocatechuate

3-hydroxy-trans-cinnamate

2,3-dihydroxy-trans-cinnamate

salicylate

trans-cinnamate

benzoate

4-aminobenzoate

(2Z,4E,7E)-2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioate

chorismate

fumarate

succinate

L-aspartate

maleate

(S)-malate

D-glucarate

cis-aconitate

(2R,3S)-2-methylisocitrate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

(S)-lactate

(R)-lactate

propanoate

pyruvate

formate

acetate

butanoate

decanoate

octanoate

(2E,6E)-farnesoate

3-oxoadipate

(15Z)-tetracosenoate

oleate

(9Z,12Z)-15,16-epoxyoctadeca-9,12-dienoate

(9Z,12Z)-15,16-dihydroxyoctadeca-9,12-dienoate

(12Z,15Z)-9,10-epoxyoctadeca-12,15-dienoate

(12Z,15Z)-9,10-dihydroxyoctadeca-12,15-dienoate

(9Z,15Z)-12,13-epoxy-octadeca-9,15-dienoate

(9Z,15Z)-12,13-dihydroxyoctadeca-9,15-dienoate

(3E,5Z)-tetradecadienoate

di-homo-γ-linolenate

linoleate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

apo-4'-lycopenoate

phytenate

pristanate

palmitate

stearate

(R)-pantoate

(3S)-3-isopropenyl-6-oxoheptanoate

(3R)-3-isopropenyl-6-oxoheptanoate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

2-oxoglutarate

glyoxylate

2-oxobutanoate

carbamate

L-serine

creatine

β-alanine

(S)-3-amino-2-methylpropanoate

glycine

L-alanine

L-glutamine

L-leucine

L-proline

L-glutamate

D-glutamate

L-lysine

N^ω-hydroxy-L-arginine

L-arginine

L-histidine

L-cysteine

L-tyrosine

L-asparagine

L-threonine

L-phenylalanine

L-tryptophan

D-alanine

D-aspartate

L-aspartyl-4-phosphate

seleno-L-homocysteine

L-selenomethionine

sarcosine

N-formimino-L-glutamate

N-formyl-L-methionine

N-acetyl-L-citrulline

N-acetyl-L-ornithine

N-acetyl-L-glutamate

N-acetyl-L-methionine

N-carbamoyl-L-aspartate

O-acetyl-L-homoserine

3-phospho-L-serine

L-citrulline

L-valine

L-isoleucine

S-sulfo-L-cysteine

L-homocysteine

L-aspartate 4-semialdehyde

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

O-succinyl-L-homoserine

O-phospho-L-homoserine

L-glutamate-5-semialdehyde

L-ornithine

L-homoserine

meso-diaminopimelate

L-selenocysteine

L-methionine

L-cystathionine

L-2,4-diaminobutanoate

L,L-diaminopimelate

a coenzyme-A group

methylglyoxal

diacetyl

acetone

(2E,6E)-farnesal

glycolaldehyde

formaldehyde

1-octanal

acetaldehyde

butan-1-al

1-propanal

isobutanal

(S)-lactaldehyde

phytenal

L-glyceraldehyde

α-D-glucopyranose

β-D-glucopyranose

aldehydo-D-mannose

β-D-mannopyranose

α-D-galactopyranose

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

ethanol

methanol

butan-1-ol

propan-1-ol

1-octanol

phytol

glycerol

D-mannitol

(2E,6E)-farnesol

ethylene glycol

(S)-propane-1,2-diol

(1R,2R,4S)-limonene-1,2-diol

(1S,2S,4R)-limonene-1,2-diol

myo-inositol

1D-1-O-(indol-3-yl)acetyl-myo-inositol

(indol-3-yl)acetyl-myo-inositol L-arabinoside

1D-myo-inositol 3-monophosphate

1D-myo-inositol 1-monophosphate

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

trehalose-trans-keto-di-mycolate

trehalose-cis-keto-di-mycolate

trehalose-trans-methoxy-di-mycolate

trehalose-cis-methoxy-di-mycolate

6-O-trans-keto-mycolyl-β-D-mannopyranosyl-1-phosphoheptaprenol

6-O-cis-keto-mycolyl-β-D-mannopyranosyl-1-phosphoheptaprenol

6-O-trans-methoxy-mycolyl-β-D-mannopyranosyl-1-phosphoheptaprenol

6-O-cis-methoxy-mycolyl-β-D-mannopyranosyl-1-phosphoheptaprenol

6-O-mycolyl-β-D-mannopyranosyl-1-phosphoheptaprenol

6-O-α-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

1-oleoyl-sn-glycerol 3-phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

dioleoyl phosphatidate

apo-4'-lycopenal

(4S)-7-hydroxy-4-isoprenyl-7-methyl-2-oxo-oxepanone

(4R)-7-hydroxy-4-isoprenyl-7-methyl-2-oxo-oxepanone

(+)-(1S,4R)-limonene-1,2- epoxide

(1R,4S)-1-hydroxymenth-8-en-2-one

(1S,4R)-1-hydroxymenth-8-en-2-one

(2Z,6E)-farnesyl diphosphate

mono-trans,octa-cis-decaprenyl diphosphate

(2E,6E)-farnesyl diphosphate

trans,octacis-decaprenyl phosphate

3-octaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

all-trans-octaprenyl diphosphate

geranylgeranyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

5-deoxy-dihydrokalafungin

(S)-DNPA

2-((1R,3S),-1',9'-dihydroxy-1'-methyl-10'-oxo-3',4',5',10'-tetrahydro-1H-benzo[g]isochromen-3'-yl)acetate

(S)-4-(3'-acetyl-5'-hydroxy-4'-oxo-1',4'-dihydronapthalen-2'-yl)-3-hydroxybutanoate

4-(3'-acetyl-5'-hydroxy-4'-oxo-1',4'-dihydronapthalen-2'-yl)-3-oxobutanoate

betanidin

betanidin quinone

(S)-nicotine

dihydrokalafungin

maltotriose

maltotetraose

cellotetraose

maltoheptaose

maltohexaose

maltopentaose

α-maltose

sucrose

α,α-trehalose

β-D-cellobiose

mycobacterial arabinogalactan containing α(1->3) arabinofuran linkages

mycobacterial arabinogalactan containing extended α(1->3) arabinofuran linkages

mycobacterial arabinogalactan containing linear arabinofuran

mycobacterial arabinogalactan primed with arabinofuran

mycobacterial arabinogalactan containing α(1->3) and β(1->2) arabinofuran linkages

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-glucosamine

β-D-fructofuranose

D-ribulose

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (E. faecium, tetrapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan tetramer with an L,D cross-link (Enterococcus faecium)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

sucrose 6^F-phosphate

α,α-trehalose 6-phosphate

ADP-α-D-glucose

GDP-α-D-glucose

GDP-α-D-mannose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

5-phospho-α-D-ribose 1-diphosphate

4-phospho-D-erythronate

D-erythrose 4-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

D-fructose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

1-deoxy-D-xylulose 5-phosphate

D-ribulose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

L-fuculose 1-phosphate

α-D-galactose 1-phosphate

β-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

[β-D-galactofuranosyl-(1→5)-β-D-galactofuranosyl-(1→6)]₁₄-β-D-galactofuranosyl-(1→5)-β-D-galactofuranosyl-(1→4)--L-rhamnopyranosyl-(1→3)-N-acetyl-α-D-glucosaminyl-diphospho-trans,octacis-decaprenol

β-D-galactofuranosyl-(1→5)-β-D-galactofuranosyl-(1→4)-α-L-rhamnopyranosyl-(1→3)-N-acetyl-α-D-glucosaminyl-diphospho-trans,octacis-decaprenol

adenylo-succinate

cyclic-AMP

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

pppGpp

ppGpp

5'-deoxyadenosine

β-nicotinamide D-ribonucleotide

reduced β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

(S)-4-hydroxymandelate

(R)-4-hydroxymandelate

2-iminosuccinate

2-iminobutanoate