an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

4'-phosphopantetheine

orotidine 5'-phosphate

8-amino-7-oxononanoate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

7,8-diaminopelargonate

dethiobiotin

5-amino-6-(5-phospho-D-ribitylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribosylamino)uracil

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

carbonic acid

coproporphyrinogen III

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

CO₂

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

α-D-glucosamine 1-phosphate

thiamine phosphate

thiamine diphosphate

O-acetyl-L-serine

hydrogen selenide

H₂O

citrate

1,5-anhydro-D-fructose

octadecanal

(R)-synephrine

(4-hydroxyphenyl)acetate

octopamine

N⁵-carboxyaminoimidazole ribonucleotide

selenodiglutathione

glutathioselenol

L-dehydro-ascorbate

(R)-pantothenate

2-amino-3-carboxymuconate-6-semialdehyde

2-hydroxy-5-(methylsulfanyl)-3-oxopent-1-enyl 1-phosphate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

(2S)-lactyl-2-diphospho-5'-guanosine

lipid IV_A

chloroacetaldehyde

5,6-dimethylbenzimidazole

dialurate

4-amino-2-methyl-5-pyrimidinemethanol

(S)-dihydroorotate

(R)-1-amino-2-propanol O-2-phosphate

α-ribazole

α-ribazole 5'-phosphate

2-keto-L-gulonate

acetoacetate

1,4-dihydroxy-2-naphthoate

propanoyl phosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

N-acetyl-D-muramate 6-phosphate

glutathionylspermidine

creatinine

4-amino-4-deoxychorismate

1-deoxy-L-glycero-tetrulose 4-phosphate

N²-succinyl-L-glutamate 5-semialdehyde

4-acetamidobutanoate

3-methyl-2-butenal

salicyl alcohol

methylsalicylate

(L-threonylcarbamoyl)adenylate

2-methyl-1,4-benzoquinone

methyl-1,4-benzoquinol

N-(2,3-dihydroxybenzoyl)-L-serine trimer

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

acrylamide

acrylate

4-guanidinobutyramide

4-guanidinobutanoate

propionamide

DNA without lesion

31-O-desmethylFK-506

FK-506

N²-succinylglutamate

7,8-didemethyl-8-hydroxy-5-deazariboflavin

oxalate

hydrogenobyrinate

(indol-3-yl)acetamide

all-trans-13,14-dihydroretinol

shikimate

formamide

2-maleylacetate

1,6-anhydro-N-acetyl-β-muramate

(7R)-7-(4-carboxybutanamido)cephalosporanate

glutarate

propane-1,3-diamine

H₂

acetyl phosphate

5-deoxy-α-ribose 1-phosphate

4-phosphooxy-L-threonine

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

hydrogenobyrinate a,c-diamide

carbon monoxide

2-aminomalonate semialdehyde

2-iminoacetate

N-ethylglycine

ethylamine

1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one

3-oxopropanoate

5-oxo-L-proline

2-succinylbenzoate

crepenynate

D-erythro-imidazole-glycerol-phosphate

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

ManNAc-GlcNAc-PP-undecaprenol

(S)-4-hydroxy-2-oxopentanoate

O-ureido-L-homoserine

coenzyme B

methanophenazine

CoB-CoM heterodisulfide

dihydromethanophenazine

N-acetyl-L,L-2,6-diaminopimelate

N6'-acetylkanamycin-B

chloramphenicol

2-dehydro-3-deoxy-D-gluconate 6-phosphate

3-demethylubiquinol-6

imidazole acetol-phosphate

L-histidinol phosphate

5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate

S-methyl-5-thio-α-D-ribose 1-phosphate

5-(methylsulfanyl)-ribulose 1-phosphate

prephytoene diphosphate

histidinal

histidinol

2-dehydropantoate

canavaninosuccinate

L-canavanine

L-arginino-succinate

5-methylcytosine

4-hydroxy-2-nonenal

L-gulono-1,4-lactone

γ-L-glutamyl 5-phosphate

arsenite

preuroporphyrinogen

porphobilinogen

3-dehydroquinate

3-dehydroshikimate

(S)-ureidoglycolate

α-D-galactosyl-diphosphoundecaprenol

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

dihydrolipoamide

S-acetyldihydrolipoamide

N-acetyl-L-glutamate 5-semialdehyde

hydroxypyruvate

2-oxoglutaramate

2-C-methyl-D-erythritol 4-phosphate

shikimate 3-phosphate

succinate semialdehyde

urea-1-carboxylate

(2S)-2-isopropyl-3-oxosuccinate

3-ethylmalate

2-oxovalerate

oxaloacetate

tryptamine

3,4-dihydroxyphenylacetaldehyde

5-methoxytryptamine

5-methoxyindoleacetaldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

methylamine

5-hydroxyindole acetaldehyde

4-acetamidobutanal

(1S,4S)-2,5-dichloro-2,5-cyclohexadiene-1,4-diol

(3R,6R)-1,3,4,6-tetrachlorocyclohexa-1,4-diene

(1S,4R)-2,4,5-trichloro-2,5-cyclohexadiene-1-diol

1,2-dichloroethane

2-chloroethanol

carbamoyl phosphate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-2,3,4,5-tetrahydrodipicolinate

dihydroxyacetone

prenyl diphosphate

isopentenyl diphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

prephenate

3-mercaptopyruvate

3-deoxy-D-arabino-heptulosonate 7-phosphate

cyanate

S-adenosyl 3-(methylsulfanyl)propylamine

S-methyl-5'-thioadenosine

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

1,4-dihydroxy-2-naphthoyl-CoA

(2-hydroxyphenyl)acetate

homogentisate

5-amino-6-(D-ribitylamino)uracil

nicotinate adenine dinucleotide

glutathione disulfide

pimeloyl-CoA

N¹-(5-phospho-β-D-ribosyl)glycinamide

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

1-piperideine 6-carboxylate

(S)-2-amino-6-oxohexanoate

(S)-4-amino-5-oxopentanoate

5-aminolevulinate

β-nicotinate D-ribonucleotide

quinolinate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

N-(5-phosphoribosyl)-anthranilate

3-phosphooxypyruvate

phosphoenolpyruvate

isochorismate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

5-phospho-β-D-ribosylamine

2-(α-hydroxyethyl)thiamine diphosphate

5-enolpyruvoyl-shikimate 3-phosphate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

3'-phosphoadenylyl-sulfate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

glycerone phosphate

4-methyl-2-oxopentanoate

(S)-3-methyl-2-oxopentanoate

S-formylglutathione

3-methyl-2-oxobutanoate

(2S)-2-isopropylmalate

ethanolamine

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

anthranilate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

(R)-4'-phosphopantothenate

(R)-4'-phosphopantothenoyl-L-cysteine

2-carboxy-L-threo-pentonate

2-carboxy-L-xylonolactone

bisorganyltrisulfane

2,3-dioxo-L-gulonate

cyclic- 3,4-O-oxalyl-L-threonate

enol-phenylpyruvate

5-hydroxyindole thiazolidine carboxylate

ammonia

dehydroascorbate (bicyclic form)

cyclic-2,3-O-oxalyl-L-threonate

lipid X

lipid A disaccharide (E. coli)

oxalosuccinate

2-phosphoglycolate

glycolate

urea

hydrogen peroxide

6-phospho D-glucono-1,5-lactone

D-gluconate 6-phosphate

N-acetylglutamyl-phosphate

(2E,6E)-farnesyl diphosphate

pristanate

cyanophycin primer

cyanophycin primer-L-aspartate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-cysteinylglycine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

4-methylphenol

L-homocysteine

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

phenylacetate

adenosylcobalamin

cob(I)alamin

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)inamide

adenosylcobinamide

magnesium-protoporphyrin IX 13-monomethyl ester

Mg-protoporphyrin

cobalt-factor III

cobalt-sirohydrochlorin

cobalt-precorrin-7

cobalt-precorrin-8

cobalt-precorrin-6B

cobalt-precorrin-6A

adenosylcobinamide-GDP

adenosylcobalamin 5'-phosphate

cobalt-precorrin-3

cobalt-precorrin-4

adenosylcobyrate

cob(II)yrinate c-monoamide

cobyrinate

cobalt-precorrin-5A

cobalt-precorrin-5B

cob(II)yrinate a,c-diamide

chlorophyll a

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

3,8-divinyl chlorophyllide a

3,8-divinyl protochlorophyllide a

chlorophyllide a

protochlorophyllide a

adenosyl-cobinamide phosphate

protoheme

N₂

hydrogen cyanide

protoporphyrinogen IX

protoporphyrin IX

uroporphyrinogen-I

coproporphyrinogen I

uroporphyrinogen-III

(Z,Z)-biliverdin-IX α

(2R,3Z)-phycocyanobilin

oxygen

hydrogen sulfide

2-chloroacetate

sn-glycerol 3-phosphate

(R)-glycerate

2,3-diphospho-D-glycerate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2S)-2-phospholactate

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

N-acetyl-D-mannosamine 6-phosphate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

1-oleoyl-2-lyso-glycerone phosphate

(R)-citramalate

5,10-methenyltetrahydrofolate mono-L-glutamate

2-octaprenylphenol

(15S)-HPETE

superoxide

nitric oxide

monodehydroascorbate radical

hydroxyl radical

4-nitrobenzyl alcohol

4-nitrobenzaldehyde

chloramphenicol 3-acetate

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

4-nitrophenyl phosphate

4-nitrophenol

S-(hydroxymethyl)glutathione

dimethyl sulfide

glutathione

thiocyanate

methanethiol

S-sulfanylglutathione

5-(2-hydroxyethyl)-4-methylthiazole

4-methyl-5-(2-phosphooxyethyl)thiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

coenzyme M

taurine

L-cysteate

3-sulfopyruvate

(2R)-3-sulfolactate

(2R)-phospho-3-sulfolactate

(R)-S-lactoylglutathione

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

selenide

thiosulfate

OH^-

nitrite

nitrate

hydrogensulfite

hydrogencarbonate

molybdate

chloride

phosphonate

phosphate

diphosphate

triphosphate

Fe³⁺

ammonium

K⁺

H⁺

Fe²⁺

Cu²⁺

Ca²⁺

Ni²⁺

Co²⁺

Zn²⁺

Mg²⁺

4-[(Z)-2-aminoethenyl]phenol

4-[(E)-2-(methylamino)ethenyl]phenol

(2Z)-2-aminobut-2-enoate

agmatine

N-acetylputrescine

spermine

spermidine

putrescine

tyramine

2-phenylethylamine

serotonin

4-(2-iminoethyl)phenol

4-[(2Z)-2-(methylimino)ethyl]phenol

2-iminosuccinate

2-iminobutanoate

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

2,5-dichlorophenol

allantoate

acetamide

isopenicillin N

penicillin N

(7R)-7 aminocephalosporanate

(S)-(+)-allantoin

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

nicotinamide

ethene

heptadecane

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

2-cis-abscisate

8'-hydroxyabscisate

phaseic acid

malonyl-CoA

acetyl-CoA

2-methylbutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

phenylacetyl-CoA

4-hydroxybenzoyl-CoA

succinyl-CoA

2-methylacetoacetyl-CoA

3'-dephospho-CoA

trans-caffeoyl-CoA

trans-feruloyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

phytenoyl-CoA

phytanoyl-CoA

(S)-malyl-CoA

oleoyl-CoA

(Z)-15-tetracosenoyl-CoA

butanoyl-CoA

propanoyl-CoA

decanoyl-CoA

octanoyl-CoA

palmitoyl-CoA

2-hydroxyphytanoyl-CoA

pristanoyl-CoA

hexadecanedioyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

all-trans-retinyl palmitate

trans-dienelactone

cis-dienelactone

D-glucono-1,5-lactone

FADH₂

FMNH₂

FAD

FMN

(S)-NADHX

(R)-NADHX

NADH

NADPH

NAD⁺

NADP⁺

phylloquinol

caldariellaquinol

ubiquinol-10

ubiquinol-7

ubiquinol-6

ubiquinol-8

ubiquinol-9

menaquinol-8

menaquinol-6

menaquinol-7

demethylmenaquinol-8

demethylmenaquinol-6

demethylmenaquinol-7

3-demethylubiquinol-10

3-demethylubiquinol-7

3-demethylubiquinol-8

3-demethylubiquinol-9

caldariellaquinone

coenzyme A

molybdopterin

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

oxidized coenzyme F₄₂₀-0

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

5,6,7,8-tetrahydrofolate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

L-ascorbate

thiamine

nicotinate

riboflavin

pyridoxal 5'-phosphate

pyridoxine 5'-phosphate

pyridoxine

pyridoxal

δ-tocotrienol

β-tocotrienol

γ-tocotrienol

α-tocotrienol

δ-tocopherol

β-tocopherol

γ-tocopherol

α-tocopherol

menadione

all-trans-retinol

all-trans-retinal

(S)-1-pyrroline-5-carboxylate

precorrin-6B

precorrin-6A

precorrin-7

precorrin-8x

precorrin-3A

precorrin-1

precorrin-2

precorrin-3B

precorrin-4

precorrin-5

sirohydrochlorin

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

7,8-dihydroneopterin 3'-phosphate

molybdopterin adenine dinucleotide

cyclic pyranopterin phosphate

7,8-dihydroneopterin 3'-triphosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydromonapterin

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydroneopterin

7,8-dihydropteroate

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

adenine

2'-deoxyguanosine

2'-deoxyadenosine

2'-deoxyinosine

inosine

adenosine

dAMP

dGMP

dGTP

dATP

dITP

dGDP

dADP

dIDP

GDP

ADP

IDP

AMP

IMP

XMP

GMP

GTP

ATP

ITP

orotate

dCDP

CDP

dUDP

UDP

dUTP

UTP

dCTP

CTP

dUMP

dCMP

dTMP

dTDP

cytosine

dTTP

uracil

UDP-α-D-glucose

UDP-α-D-galactose

UDP-N-acetyl-α-D-mannosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-α-D-galacturonate

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-α-D-sulfoquinovopyranose

UDP-α-D-glucuronate

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-α-D-galactofuranose

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

UDP-α-D-xylose

dTDP-α-D-glucose

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

CDP-α-D-glucose

CDP-α-D-paratose

CDP-α-tyvelose

5-fluorouracil

cytidine

uridine

thymine

UMP

CMP

isoguanine

preQ₁

baicalein

6,7-dehydrobaicalein

(indole-3-yl)acetonitrile

preQ₀

salicylaldehyde

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

4-hydroxybenzoate

metanephrine

normetanephrine

benzaldehyde

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

indole

(indol-3-yl)acetaldehyde

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

2-methyl-6-phytyl-1,4-benzoquinol

2,3-dimethyl-6-phytyl-1,4-benzoquinol

demethylphylloquinol

menadiol

3,4-dihydroxyphenylacetate

protocatechuate

dopamine

(R)-adrenaline

(R)-noradrenaline

3,4-dihydroxyphenylglycolaldehyde

salicylate

4-aminobenzoate

benzoate

carbamate

L-2-aminoadipate

L-α-amino-ε-keto-pimelate

L-serine

creatine

β-alanine

L-alanine

L-proline

glycine

L-leucine

L-glutamine

D-glutamate

L-glutamate

L-histidine

N^ω-hydroxy-L-arginine

L-arginine

L-lysine

L-aspartate

L-tyrosine

L-asparagine

L-cysteine

L-threonine

L-phenylalanine

L-tryptophan

D-phenylalanine

D-aspartate

D-ornithine

D-alanine

L-saccharopine

L-aspartyl-4-phosphate

2-hydroxy-5-oxoproline

L-threonine 3-O-phosphate

3-phospho-L-serine

sarcosine

N-acetyl-L-aspartate

N-acetyl-L-citrulline

N-acetyl-L-ornithine

N-acetyl-L-methionine

N-acetyl-L-glutamate

N-carbamoyl-L-aspartate

(3S)-3-hydroxy-L-aspartate

L-citrulline

L-valine

L-isoleucine

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

S-sulfo-L-cysteine

L-homoserine

L-ornithine

L-glutamate-5-semialdehyde

O-phospho-L-homoserine

L-aspartate 4-semialdehyde

hypoglycin A

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

meso-diaminopimelate

L-selenocysteine

L-methionine

L-2,4-diaminobutanoate

L,L-diaminopimelate

chorismate

fumarate

succinate

(S)-malate

cis-aconitate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

(S)-lactate

(R)-lactate

pyruvate

acetate

formate

propanoate

butanoate

decanoate

octanoate

3-oxoadipate

(15Z)-tetracosenoate

oleate

apo-4'-lycopenoate

γ-linolenate

arachidonate

linoleate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

α-linolenate

phytenate

8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate

dinor-12-oxo-phytodienoate

palmitate

(R)-pantoate

D-gluconate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

4-(methylsulfanyl)-2-oxobutanoate

glyoxylate

2-oxobutanoate

2-oxoglutarate

methylglyoxal

diacetyl

acetone

glycolaldehyde

butan-1-al

1-octanal

acetaldehyde

formaldehyde

(S)-lactaldehyde

(R)-lactaldehyde

phytenal

D-glyceraldehyde

α-D-glucopyranose

β-D-glucopyranose

aldehydo-D-mannose

β-D-mannopyranose

β-D-ribopyranose

α-D-galactopyranose

β-D-galactopyranose

L-sorbosone

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

butan-1-ol

methanol

ethanol

glycerol

D-sorbitol

D-mannitol

(3R)-linalool

(3S)-linalool

myo-inositol

scyllo-inosose

1-amino-1-deoxy-scyllo-inositol

1D-myo-inositol 2-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 3-monophosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-oleoyl-sn-glycerol 3-phosphate

dioleoyl phosphatidate

trans,octacis-decaprenyl phosphate

di-trans,octa-cis-undecaprenyl phosphate

geranyl diphosphate

all-trans-heptaprenyl diphosphate

geranylgeranyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

mono-trans,octa-cis-decaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

torulene

apo-4'-lycopenal

antheraxanthin

violaxanthin

zeaxanthin

β-carotene 15,15' epoxide

9,9'-di-cis-ζ-carotene

prolycopene

all-trans-lycopene

all-trans phytofluene

9,15,9'-tri-cis-ζ-carotene

all-trans-3,4-didehydrolycopene

15-cis-phytoene

15,15'-dihydroxy-β-carotene

β-carotene

4'-apo-β-carotenal

phytyl diphosphate

3-octaprenyl-4-hydroxybenzoate

betanidin

betanidin quinone

ferric-[N-(2,3-dihydroxybenzoyl)-L-serine trimer] complex

iron(III) dicitrate

ferric-enterobactin complex

kanamycin B

maltotriose

maltotetraose

maltoheptaose

maltohexaose

maltopentaose

α-maltose

sucrose

α,α-trehalose

1,5-anhydro-D-mannitol

keto-L-sorbose

keto-D-fructose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-glucosamine

L-sorbosone 1,4-lactone

L-sorbosone 2,6-lactone

β-D-fructofuranose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

1-O-acetyl-α-maltose

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (mycobacteria)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (S. aureus)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

D-ribulose-1,5-bisphosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

sucrose 6^F-phosphate

ADP-α-D-glucose

GDP-α-D-mannose

GDP-4-dehydro-α-D-rhamnose

GDP-β-L-fucose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

5-phospho-α-D-ribose 1-diphosphate

4-phospho-D-erythronate

D-sedoheptulose 1,7-bisphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

D-tagatofuranose 1,6-bisphosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

α-D-ribose-1-phosphate

α-D-galactose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

L-gulonate

5'-deoxyadenosine

adenylo-succinate

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

cyclic-AMP

cyclic-GMP

pppGpp

ppGpp

8-oxo-GTP

8-oxo-dGTP

5-fluorocytosine

2-hydroxy-dATP

5-hydroxy-CTP

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

cyclic di-3',5'-guanylate

hypoglycin B