an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

H₂O

glycerone phosphate

S-formylglutathione

5-hydroxyindole acetaldehyde

5-hydroxytryptophol

3-methoxy-4-hydroxyphenylglycolaldehyde

indole-3-glycol aldehyde

indole-3-glycol

isobutanol

3-methylbutanal

3-methylbutanol

2-methylbutanal

2-methylbutanol

2-phenylethanol

glutathione disulfide

hydrogen peroxide

glycolate

2-phosphoglycolate

CO₂

phosphoenolpyruvate

N-succinyl-2-amino-6-ketopimelate

(S)-2,3,4,5-tetrahydrodipicolinate

coproporphyrinogen III

thiamine diphosphate

thiamine phosphate

(E)-3-(methoxycarbonyl)pent-2-enedioate

4-methylumbelliferyl glucoside

4-hydroxybenzaldehyde

scopolin

cis-coumarinic acid-β-D-glucoside

S-methyl-5-thio-α-D-ribose 1-phosphate

S-methyl-5'-thioadenosine

5-deoxy-α-ribose 1-phosphate

5-(methylsulfanyl)-ribulose 1-phosphate

6-aminohexanoate linear dimer

6-aminohexanoate cyclic dimer

3-phosphooxypyruvate

4-fumaryl-acetoacetate

4-maleyl-acetoacetate

4-hydroxy-2-nonenal

N-(5-phosphoribosyl)-anthranilate

anthranilate

3-deoxy-D-arabino-heptulosonate 7-phosphate

orotidine 5'-phosphate

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2,3-didehydroadipyl-CoA

prephenate

5-methylcytosine

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

4'-phosphopantetheine

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

L-arginino-succinate

canavaninosuccinate

O-ureido-L-homoserine

L-canavanine

carbamoyl phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

prenyl diphosphate

isopentenyl diphosphate

(R)-mevalonate

(R)-5-phosphomevalonate

(R)-mevalonate diphosphate

4-phosphooxy-L-threonine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

isoquinolin-2(1H)-one

isoquinoline

carbonic acid

5-amino-6-(5-phospho-D-ribosylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-amino-6-(D-ribitylamino)uracil

lipid A disaccharide (E. coli)

lipid X

3-deoxy-α-D-manno-2-octulosonate

lipid IV_A

L-β-lysine

oxaloacetate

quinolinate

β-nicotinate D-ribonucleotide

2,5-diaminohexanoate

α-D-glucosamine 1-phosphate

adenosine 3',5'-bisphosphate

4-imidazolone-5-propanoate

urocanate

arsenite

methylamine

ethylamine

N-ethylglycine

2-iminoacetate

histidinol

histidinal

L-histidinol phosphate

imidazole acetol-phosphate

D-erythro-imidazole-glycerol-phosphate

S-acetyldihydrolipoamide

dihydrolipoamide

nicotinate adenine dinucleotide

(R)-4'-phosphopantothenate

(R)-pantothenate

porphobilinogen

5-aminolevulinate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

isochorismate

(2,3-dihydroxybenzoyl)adenylate

(L-aspartyl)adenylate

oxalosuccinate

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

2-succinylbenzoate

succinate semialdehyde

5-enolpyruvoyl-shikimate 3-phosphate

citrate

(S)-dihydroorotate

3'-phosphoadenylyl-sulfate

adenosine 5'-phosphosulfate

selenophosphate

1,4-dihydroxy-2-naphthoyl-CoA

2-dehydropantoate

(S)-3-methyl-2-oxopentanoate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

4-methyl-2-oxopentanoate

(S)-4-hydroxy-2-oxohexanoate

3-methyl-2-oxobutanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

homogentisate

(2-hydroxyphenyl)acetate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

2-(α-hydroxyethyl)thiamine diphosphate

preuroporphyrinogen

α-ribazole

α-ribazole 5'-phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

adenosine 5'-phosphoselenate

(25S)-3α,7α-dihydroxy-5β-cholestanoyl-CoA

xanthine

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

γ-L-glutamyl 5-phosphate

dethiobiotin

7,8-diaminopelargonate

8-amino-7-oxononanoate

pimeloyl-CoA

S-adenosyl 3-(methylsulfanyl)propylamine

3-deoxy-D-manno-octulosonate 8-phosphate

N²-succinyl-L-ornithine

N²-succinyl-L-arginine

2-oleoylglycerol

6-phospho D-glucono-1,5-lactone

D-gluconate 6-phosphate

(2Z,4E)-2-aminomuconate

2-amino-3-carboxymuconate-6-semialdehyde

3-hydroxyanthranilate

(2Z,4E)-2-amino-6-oxohexa-2,4-dienoate

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

(S)-4-amino-5-oxopentanoate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

N-Formyl-L-kynurenine

phthalate 4,5-cis-dihydrodiol

phthalate

adipate

6-oxohexanoate

6-aminohexanoate

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

(E)-2-benzylidenesuccinyl-CoA

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

2-maleylacetate

4-acetamidobutanoate

4-acetamidobutanal

N²-succinylglutamate

N²-succinyl-L-glutamate 5-semialdehyde

DNA without lesion

N-succinyl-L,L-2,6-diaminopimelate

pinosylvin

pinocembrin chalcone

phloretin

ethanolamine

L-gulono-1,4-lactone

L-xylo-hex-3-ulono-1,4-lactone

α-D-galacturonate 1-phosphate

lanthionine

acetoacetate

ammonia

trans-O-hydroxybenzylidenepyruvate

L-dehydro-ascorbate

N-ethylammeline

deethylsimazine

carbon monoxide

3-[(4-amino-6-chloro-1,3,5-triazin-2-yl)amino]benzenesulfonate

2,2'-disulfonyl azobenzene

β-D-ribosylnicotinate

N-acetylanthranilate

3-hydroxy-2-methyl-1H-quinolin-4-one

methylsalicylate

salicyl alcohol

4-amino-4-deoxychorismate

urea-1-carboxylate

benzoylsuccinyl-CoA

propionamide

(indol-3-yl)acetamide

4-guanidinobutanoate

4-guanidinobutyramide

acrylate

acrylamide

(2S)-2-isopropylmalate

2-oxovalerate

3-ethylmalate

(2S)-2-isopropyl-3-oxosuccinate

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

1-deoxy-L-glycero-tetrulose 4-phosphate

urea

(R)-4'-phosphopantothenoyl-L-cysteine

hydrogen selenide

(E)-glutaconate

O-acetyl-L-serine

2-oxopent-4-enoate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

prephytoene diphosphate

5-oxo-L-proline

(L-threonylcarbamoyl)adenylate

N⁵-carboxyaminoimidazole ribonucleotide

4-amino-2-methyl-5-pyrimidinemethanol

dihydroxyacetone

(R)-mandelate

(S)-mandelate

glutathioselenol

selenodiglutathione

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

1,4-dihydroxy-2-naphthoate

shikimate 3-phosphate

shikimate

(S)-2-amino-6-oxohexanoate

3-dehydroshikimate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

3-dehydroquinate

formamide

(3S,5S)-3,5-diaminohexanoate

(S)-5-amino-3-oxohexanoate

1,6-anhydro-N-acetyl-β-muramate

4-aminobutanoate

hydroxypyruvate

N-acetyl-D-muramate 6-phosphate

acetyl phosphate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

H₂

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

7-epicholate

N-ethylammelide

(R)-2,3-dihydroxy-3-methylpentanoate

3'-ketosucrose

butanoyl phosphate

1-piperideine 6-carboxylate

4-oxoglutaramate

(2E)-2-hydroxypenta-2,4-dienoate

(3E)-2-oxopent-3-enoate

cyclic-2,3-O-oxalyl-L-threonate

dehydroascorbate (bicyclic form)

bisorganyltrisulfane

5-hydroxyindole thiazolidine carboxylate

picolinate

enol-phenylpyruvate

cyclic- 3,4-O-oxalyl-L-threonate

2,3-dioxo-L-gulonate

2-carboxy-L-xylonolactone

2-carboxy-L-threo-pentonate

(2E,6E)-farnesyl diphosphate

pristanate

L-homocysteine

4-methylphenol

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysine

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanine

L-cysteinylglycine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

2-iminopropanoate

2-iminosuccinate

2-iminobutanoate

(R)-4-hydroxymandelate

(S)-4-hydroxymandelate

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

phenylacetate

(+)-7-epi-jasmonate

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

3α,7α,12β-trihydroxy-5β-cholan-24-oate

cholate

glycocholate

isocholate

3-dehydrocholate

androsta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

nicotinamide

5-amino-4-imidazolecarboxyamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

6-caprolactam

penicillin N

isopenicillin N

acetamide

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

5-fluoro-5-deoxy-D-ribose 1-phosphate

5'-deoxy-5'-fluoroadenosine

fluoroacetate

fluoroacetaldehyde

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

sn-glycero-3-phosphocholine

hypoglycin B

L-kynurenine

L-α-amino-ε-keto-pimelate

L-aspartyl-4-phosphate

L-saccharopine

N^ω-phospho-L-arginine

3-phospho-L-serine

O-acetyl-L-homoserine

3-hydroxy-L-kynurenine

N-carbamoyl-L-aspartate

N-acetyl-L-citrulline

N-acetyl-L-ornithine

N-acetyl-L-glutamate

N-formyl-L-glutamate

formyl-L-isoglutamine

N-formimino-L-glutamate

sarcosine

S-methyl-L-methionine

D-alanine

D-glutamate

D-lysine

D-proline

D-methionine

L-tryptophan

L-tyrosine

L-phenylalanine

L-histidine

L-alanine

L-proline

glycine

L-leucine

L-valine

L-isoleucine

L-selenocysteine

L-methionine

L-cysteine

L-ornithine

L-glutamate

L-aspartate

L-serine

L-lysine

L-asparagine

L-arginine

L,L-diaminopimelate

L-glutamine

L-threonine

L-cystathionine

L-isoglutamine

L-citrulline

L-glutamate-5-semialdehyde

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

O-phospho-L-homoserine

L-aspartate 4-semialdehyde

L-homoserine

hypoglycin A

S-sulfo-L-cysteine

3-sulfino-L-alanine

L-4-hydroxyglutamate semialdehyde

L-allo-threonine

meso-diaminopimelate

β-alanine

(S)-3-amino-2-methylpropanoate

ferrichrome

glycine betaine

choline

2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

agmatine

spermidine

putrescine

dehydrospermidine

spermine

N-acetylputrescine

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

guanosine 2',3'-cyclic monophosphate

adenosine 2',3'-cyclic monophosphate

cyclic-AMP

ATP

ADP

AMP

5'-deoxyadenosine

GDP

GTP

dADP

dATP

dGDP

dGTP

GMP

hypoxanthine

IMP

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

XMP

ITP

IDP

dITP

dIDP

ppGpp

pppGpp

adenylo-succinate

2'-deoxyadenosine

2'-deoxyguanosine

2'-deoxyinosine

adenosine 3'-monophosphate

guanosine 3'-monophosphate

cyclic-GMP

dIMP

XTP

dGMP

dAMP

isoguanine

8-oxo-dGTP

8-oxo-GTP

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

ADP-α-D-glucose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-rhamnose

GDP-α-D-mannose

GDP-α-D-glucose

CDP-α-tyvelose

CDP-α-D-paratose

dTDP-α-D-glucose

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-α-D-galactose

UDP-α-D-glucose

UDP-N-acetyl-α-D-mannosamine

UDP-α-D-glucuronate

UDP-α-D-galacturonate

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-α-D-galactofuranose

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

adenine

guanine

thymine

uracil

cytosine

preQ₁

N¹-ethyladenine

N3-methylcytosine

N¹-methyladenine

cytidine-3'-monophosphate

uridine 3'-monophosphate

uridine 2'3'-cyclic monophosphate

cytidine 2',3'-cyclic monophosphate

dTMP

dUMP

dCMP

dCDP

dUDP

dTDP

dTTP

dCTP

dUTP

UDP

CDP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

reduced β-nicotinamide D-ribonucleotide

CTP

UTP

UMP

CMP

5-hydroxy-CTP

2-hydroxy-dATP

NAD⁺

NADP⁺

NADH

NADPH

thymidine

2'-deoxyuridine

2'-deoxycytidine

adenosine

inosine

guanosine

xanthosine

uridine

cytidine

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

5-fluorouracil

5-fluorocytosine

D-gluconate

L-gulonate

aldehydo-L-galactonate

1-(β-D ribofuranosyl)nicotinamide

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

1-O-acetyl-α-maltose

3-dehydro-D-glucopyranose

lotaustralin

taxiphyllin

linamarin

linustatin

neolinustatin

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

5-phospho-α-D-ribose 1-diphosphate

4-phospho-D-erythronate

L-fuculose 1-phosphate

α-D-mannose 1-phosphate

α-D-glucopyranose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

sucrose 6^F-phosphate

α,α-trehalose 6-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (mycobacteria)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

β-D-fructofuranose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-glucosamine

glycolaldehyde

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

α-D-galactopyranose

β-D-galactopyranose

β-D-glucopyranose

α-D-glucopyranose

D-glyceraldehyde

D-xylulose

glycerol

D-arabinitol

β-D-cellobiose

maltotriose

sucrose

α,α-trehalose

maltotetraose

maltopentaose

maltohexaose

maltoheptaose

aldehydo-D-galacturonate

salicylaldehyde

all-trans-retinol

all-trans-retinyl palmitate

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

apo-4'-lycopenal

15-cis-phytoene

α-carotene

all-trans-phytoene

all-trans phytofluene

zeinoxanthin

apo-4'-lycopenoate

4-methylumbelliferone

scopoletin

coumarin

trans-resveratrol

betanidin quinone

betanidin

4-cis-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

4-trans-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

2-trans-nonenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3E)-dec-3-enoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

geranylgeranyl diphosphate

all-trans-octaprenyl diphosphate

di-trans,octa-cis-undecaprenol

dioleoyl phosphatidate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-oleoyl-2-lyso-glycerone phosphate

1-oleoyl-sn-glycerol 3-phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

α, α'-trehalose 6-α-mycolate

6-O-α-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

myo-inositol

1D-myo-inositol 3-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 2-monophosphate

phytate

D-myo-inositol (1,2,3,5,6) pentakisphosphate

D-myo-inositol (1,2,4,5,6)-pentakisphosphate

D-myo-inositol (1,2,3,4,5)-pentakisphosphate

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylglycol

2,3-dihydroxybenzoate

ethanol

propan-1-ol

phytol

butan-1-ol

methanol

methylglyoxal

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

benzaldehyde

phytenal

(S)-lactaldehyde

acetaldehyde

1-propanal

isobutanal

formaldehyde

1-octanal

butan-1-al

caldariellaquinone

Reactive Blue 5

diacetyl

isoliquiritigenin

2',4,4',6'-tetrahydroxychalcone

a coenzyme-A group

acetate

orotate

(R)-pantoate

aldehydo-D-glucuronate

(S)-1-pyrroline-5-carboxylate

palmitate

octanoate

decanoate

butanoate

stearate

(9Z,15Z)-12,13-epoxy-octadeca-9,15-dienoate

(12Z,15Z)-9,10-epoxyoctadeca-12,15-dienoate

(9Z,12Z)-15,16-epoxyoctadeca-9,12-dienoate

linoleate

oleate

γ-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

α-linolenate

(9Z,15Z)-12,13-dihydroxyoctadeca-9,15-dienoate

(12Z,15Z)-9,10-dihydroxyoctadeca-12,15-dienoate

(9Z,12Z)-15,16-dihydroxyoctadeca-9,12-dienoate

(3E,5Z)-tetradecadienoate

di-homo-γ-linolenate

phytenate

(15Z)-tetracosenoate

13(S)-HPOTE

pyruvate

2-oxoglutarate

glyoxylate

2-oxobutanoate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

salicylate

4-aminobenzoate

benzoate

formate

propanoate

(R)-lactate

(S)-lactate

(R)-glycerate

(R)-2-hydroxyglutarate

trans-aconitate

cis-aconitate

D-threo-isocitrate

chorismate

(3E)-2-oxohex-3-enedioate

succinate

fumarate

(S)-malate

4-tyrosol

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

2-nitrobenzoate

2-hydroxylaminobenzoate

urate

coumarinate

6,7-dehydrobaicalein

baicalein

2-[hydroperoxy(4-hydroxyphenyl)methyl]-6-hydroxy-1-benzofuran-3-one

6-hydroxy-2-[hydroxy-(4-hydroxyphenyl)methyl]-1-benzofuran-3-one

6-hydroxy-2-(6-oxo-1-oxaspiro[2.5]octa-4,7-dien-2-yl)-1-benzofuran-3-one

2-aminophenol

caldariellaquinol

3-demethylubiquinol-8

demethylmenaquinol-8

menaquinol-8

ubiquinol-8

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

3-methoxy-4-hydroxyphenylglycol

6-isobutyl-4-hydroxy-2-pyrone

hydrogen cyanide

acrylonitrile

(indole-3-yl)acetonitrile

preQ₀

(2R)-2-hydroxy-2-methylbutanenitrile

2-hydroxy-2-methylpropanenitrile

2-hydroxychromene-2-carboxylate

7,8-dihydrolumazine

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydromonapterin

7,8-dihydroneopterin

7,8-dihydroneopterin 2',3'-cyclic phosphate

7,8-dihydropterin

7,8-dihydroneopterin 3'-phosphate

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

7,8-dihydropteroate

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

riboflavin

FMN

FAD

FMNH₂

reduced riboflavin

FADH₂

6,7-dimethyl-8-(1-D-ribityl)lumazine

cob(I)alamin

adenosylcobalamin

sirohydrochlorin

precorrin-2

precorrin-1

thiamine

nicotinate

L-ascorbate

pyridoxal 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxine 5'-phosphate

pyridoxamine

pyridoxine

pyridoxal

coenzyme A

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

selenide

thiosulfate

OH^-

nitrite

nitrate

hydrogensulfite

hydrogencarbonate

molybdate

superoxide

phosphate

diphosphate

triphosphate

chloride

Fe³⁺

Zn²⁺

Fe²⁺

ammonium

Na⁺

K⁺

H⁺

S-(hydroxymethyl)glutathione

3-(methylsulfanyl)propanal

methionol

dimethyl sulfide

glutathione

(R)-S-lactoylglutathione

3-sulfopyruvate

L-cysteate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

thiocyanate

S-sulfanylglutathione

(R)-NADHX

(S)-NADHX

D-glucono-1,5-lactone

trans-dienelactone

cis-dienelactone

L-galactono-1,4-lactone

acetyl-CoA

2-methylacetoacetyl-CoA

succinyl-CoA

malonyl-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

(3S)-hydroxyadipyl-CoA

(E)-2-methylcrotonoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-hydroxyisovaleryl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

(+)-7-epi-jasmonoyl-CoA

4-hydroxybenzoyl-CoA

3'-dephospho-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

acryloyl-CoA

β-alanyl-CoA

(25S)-3α,7α,12α-trihydroxy-5β-cholestanoyl-CoA

(25R)-3α,7α,12α-trihydroxy-5β-cholestanoyl-CoA

(25R)-3α,7α-dihydroxy-5β-cholestanoyl-CoA

(2E,5Z)-tetradecenoyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

isovaleryl-CoA

dihydro-4-coumaroyl-CoA

isobutanoyl-CoA

(R)-2-hydroxyglutaryl-CoA

(E)-glutaconyl-CoA

dihomo γ-linolenoyl-CoA

2-methylbutanoyl-CoA

(S)-3-aminobutanoyl-CoA

phenylacetyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

3-oxoadipyl-CoA

3-oxo-myristoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-palmitoyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

3-oxododecanoyl-CoA

3-oxooctanoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

hexadecanedioyl-CoA

stearoyl-CoA

palmitoyl-CoA

pristanoyl-CoA

2-hydroxyphytanoyl-CoA

phytanoyl-CoA

octanoyl-CoA

lauroyl-CoA

decanoyl-CoA

hexanoyl-CoA

propanoyl-CoA

butanoyl-CoA

cerotoyl-CoA

2-carboxy-cerotoyl-CoA

(Z)-15-tetracosenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

(S)-malyl-CoA

phytenoyl-CoA

(E)-cinnamoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-octadec-2-enoyl-CoA

crotonyl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

hydroxyl radical

monodehydroascorbate radical

(S)-3-hydroxy-isobutanoate

5,10-methenyltetrahydrofolate mono-L-glutamate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

S⁰

oxygen

hydrogen sulfide

protoporphyrinogen IX

coproporphyrinogen I

uroporphyrinogen-I

uroporphyrinogen-III

protoporphyrin IX

(Z,Z)-biliverdin-IX α

siroheme

hemin

protoheme

adenosylcobalamin 5'-phosphate

adenosylcobinamide

cob(I)inamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

ethylphosphate

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal