an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

4-amino-4-deoxychorismate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

(E)-2-benzylidenesuccinyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

(S)-2-amino-6-oxohexanoate

2,4'-dihydroxyacetophenone

glutathionylspermidine

5-dehydro-4-deoxy-D-glucarate

4-hydroxy-2-nonenal

31-O-desmethylFK-506

FK-506

5-hydroxytryptophol

indole-3-glycol

indole-3-glycol aldehyde

isobutanol

3-methylbutanol

3-methylbutanal

2-methylbutanol

2-methylbutanal

2-phenylethanol

DNA without lesion

3-methyl-2-butenal

nigerose

N²-succinyl-L-glutamate 5-semialdehyde

N²-succinylglutamate

ethanolamine

arsenite

2-iminoacetate

4-maleyl-acetoacetate

2-maleylacetate

5-oxo-L-proline

quinolinate

(R)-1-amino-2-propanol O-2-phosphate

(R)-1-aminopropan-2-ol

α-ribazole

5,6-dimethylbenzimidazole

α-ribazole 5'-phosphate

hydrogenobyrinate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

β-nicotinate D-ribonucleotide

β-D-ribosylnicotinate

N-succinyl-L,L-2,6-diaminopimelate

(R)-4'-phosphopantothenoyl-L-cysteine

propionamide

(indol-3-yl)acetamide

acrylamide

acrylate

4-guanidinobutyramide

4-guanidinobutanoate

L-histidinol phosphate

7,8-diaminopelargonate

pimeloyl-CoA

8-amino-7-oxononanoate

dethiobiotin

3-deoxy-D-manno-octulosonate 8-phosphate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

N²-succinyl-L-ornithine

N²-succinyl-L-arginine

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

N¹-(5-phospho-β-D-ribosyl)glycinamide

nicotinate adenine dinucleotide

L-gulono-1,4-lactone

D-erythro-imidazole-glycerol-phosphate

imidazole acetol-phosphate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

γ-L-glutamyl 5-phosphate

2-isopropylmaleate

O-ureido-L-homoserine

2-phosphoglycolate

α-D-glucosamine 1-phosphate

oxalosuccinate

3-deoxy-α-D-manno-2-octulosonate

orotidine 5'-phosphate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-enolpyruvoyl-shikimate 3-phosphate

prephenate

vanillyl alcohol

vanillin

2-aminoacetaldehyde

(2-hydroxyphenyl)acetate

homogentisate

2-(4-hydroxyphenyl)-2-oxoacetate

phenylglyoxylate

5-phospho-β-D-ribosylamine

6-aminohexanoate linear dimer

6-aminohexanoate

5-aminolevulinate

glutathione disulfide

squalene

presqualene diphosphate

nicotine-1'-N-oxide

N,N-dimethylaniline

N,N-dimethylaniline-N-oxide

(S)-2,3,4,5-tetrahydrodipicolinate

N-succinyl-2-amino-6-ketopimelate

6-phospho D-glucono-1,5-lactone

D-gluconate 6-phosphate

3-deoxy-D-arabino-heptulosonate 7-phosphate

shikimate

shikimate 3-phosphate

2-(α-hydroxyethyl)thiamine diphosphate

thiamine diphosphate

2-C-methyl-D-erythritol 4-phosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

thiamine phosphate

N-(5-phosphoribosyl)-anthranilate

anthranilate

citrate

2-dehydropantoate

3-dehydroquinate

3-dehydroshikimate

2,3-didehydroadipyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

(E)-4-coumaroyl-CoA

hydrogen selenide

O-acetyl-L-serine

4'-phosphopantetheine

isopentenyl diphosphate

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

prenyl diphosphate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

(2S)-2-isopropylmalate

(R)-4'-phosphopantothenate

glycolate

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

1,6-anhydro-N-acetyl-β-muramate

cis-coumarinic acid-β-D-glucoside

scopolin

4-hydroxybenzaldehyde

4-methylumbelliferyl glucoside

3-keto-β-D-galactose

2-dehydro-3-deoxy-D-gluconate

cyclohexanone

ε-caprolactone

4-fumaryl-acetoacetate

acetoacetate

pseudouridine 5'-phosphate

dimethylsulfoniopropanoate

4-acetamidobutanal

4-acetamidobutanoate

D-glucurono-6,3-lactone

prop-2-ynal

propynoate

3,4-dihydroxyphenylacetaldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

5-hydroxyindole acetaldehyde

5-hydroxyindole acetate

imidazole acetaldehyde

4-imidazoleacetate

coproporphyrinogen III

3-mercaptopyruvate

L-selenocystathionine

2-dehydro-3-deoxy-D-gluconate 6-phosphate

5-carboxymethyl-2-hydroxymuconate

3-oxopropanoate

4-aminobutanoate

carbonic acid

(2R,3S)-3-isopropylmalate

(2S)-2-isopropyl-3-oxosuccinate

3-ethylmalate

2-oxovalerate

3-methyl-2-oxobutanoate

4-methyl-2-oxopentanoate

(S)-3-methyl-2-oxopentanoate

canavaninosuccinate

L-canavanine

L-arginino-succinate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-phosphooxy-L-threonine

3-phosphooxypyruvate

glycerone phosphate

porphobilinogen

preuroporphyrinogen

6-chloro-2-hydroxy-4-carboxymuconate-6-semialdehyde

4-carboxy-2-hydroxymuconate-6-semialdehyde

(R)-3-methylitaconate

dimethylmaleate

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(D-ribitylamino)uracil

hydrogenobyrinate a,c-diamide

oxaloacetate

phosphoenolpyruvate

hydrogen peroxide

histidinal

histidinol

methylsalicylate

salicyl alcohol

meso-tartrate

L-tartrate

2-hydroxy-3-oxosuccinate

succinate semialdehyde

(S)-dihydroorotate

carbamoyl phosphate

N-acetyl-L-glutamate 5-semialdehyde

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

3'-phosphoadenylyl-sulfate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

CO₂

S-ribosyl-L-homocysteine

N-acetylglutamyl-phosphate

3-demethylubiquinol-6

(R)-pantothenate

H₂O

2-carboxy-L-threo-pentonate

2-carboxy-L-xylonolactone

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

2,3-dioxo-L-gulonate

cyclic- 3,4-O-oxalyl-L-threonate

enol-phenylpyruvate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

5-hydroxyindole thiazolidine carboxylate

ammonia

dehydroascorbate (bicyclic form)

cyclic-2,3-O-oxalyl-L-threonate

(3E)-2-oxopent-3-enoate

(2E)-2-hydroxypenta-2,4-dienoate

4-oxoglutaramate

1-piperideine 6-carboxylate

(4-hydroxyphenyl)acetate

L-dehydro-ascorbate

α-D-galacturonate 1-phosphate

selenodiglutathione

glutathioselenol

pseudouridine

2-hydroxy-4-carboxymuconate semialdehyde hemiacetal

2-pyrone-4,6-dicarboxylate

6-aminohexanoate cyclic dimer

6-oxohexanoate

adipate

L-xylo-hex-3-ulono-1,4-lactone

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

(S)-4-hydroxy-2-oxohexanoate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

3'-ketosucrose

N-acetyl-D-muramate 6-phosphate

4-amino-2-methyl-5-pyrimidinemethanol

N⁵-carboxyaminoimidazole ribonucleotide

2-amino-3-carboxymuconate-6-semialdehyde

(S)-4-amino-5-oxopentanoate

autoinducer 2

1-deoxy-L-glycero-tetrulose 4-phosphate

4-imidazolone-5-propanoate

urocanate

butanoyl phosphate

H₂

carbon monoxide

acetyl phosphate

urea

1,4-dihydroxy-2-naphthoate

cycloeucalenol

cis,cis-muconate

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

3-oxo-5,6-didehydrosuberyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

dialurate

2-oxopent-4-enoate

3-(3-hydroxyphenyl)propanoate

(2Z,4E)-2-hydroxy-6-oxonona-2,4-diene-1,9-dioate

3-phenylpropanoate

3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)propanoate

3-(2,3-dihydroxyphenyl)propanoate

(2E)-3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)prop-2-enoate

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(4S)-4-hydroxy-2-oxoheptanedioate

2-deoxygluconate

3-dehydro-2-deoxy-D-gluconate

(S)-4-hydroxy-2-oxopentanoate

4-methyl-3-oxoadipate

muconolactone

(4,5-dihydro-5-oxofuran-2-yl)-acetate

3-methylmuconolactone

4-methyl-3-oxoadipate-enol-lactone

2-keto-L-gulonate

urea-1-carboxylate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

(indol-3-yl)pyruvate

(2E,6E)-farnesyl diphosphate

L-cysteinylglycine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

2-iminosuccinate

2-iminobutanoate

2-iminopropanoate

4-methylphenol

hippurate

L-homocysteine

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

phenylacetate

adenosylcobalamin

cob(I)alamin

cob(II)yrinate c-monoamide

cobyrinate

adenosyl-cobinamide phosphate

adenosylcobyrate

adenosylcobinamide-GDP

adenosylcobalamin 5'-phosphate

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)inamide

adenosylcobinamide

cob(II)yrinate a,c-diamide

cobalt-factor III

cobalt-precorrin-3

cobalt-sirohydrochlorin

cobalt-precorrin-7

cobalt-precorrin-8

cobalt-precorrin-6B

cobalt-precorrin-5B

cobalt-precorrin-6A

cobalt-precorrin-4

cobalt-precorrin-5A

protoheme

hydrogen cyanide

uroporphyrinogen-I

coproporphyrinogen I

protoporphyrinogen IX

uroporphyrinogen-III

protoporphyrin IX

siroheme

hydrogen sulfide

oxygen

2-chloroacetate

sn-glycerol 3-phosphate

2,3-diphospho-D-glycerate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

1-oleoyl-2-lyso-glycerone phosphate

(R)-citramalate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

2-fluorobenzoate

5,10-methenyltetrahydrofolate mono-L-glutamate

3-(all-trans-octaprenyl)benzene-1,2-diol

(S)-3-hydroxy-isobutanoate

2-octaprenylphenol

2-methoxy-6-(all-trans-octaprenyl)phenol

2-iodobenzoate

2-bromobenzoate

2-chlorobenzoate

superoxide

monodehydroascorbate radical

hydroxyl radical

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

S-(hydroxymethyl)glutathione

S-methyl-L-methionine

methionol

3-(methylsulfanyl)propanal

3-dimethylsulfoniopropionaldehyde

dimethyl sulfide

glutathione

thiocyanate

methanethiol

S-sulfanylglutathione

4-methyl-5-(2-phosphooxyethyl)thiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

5-(2-hydroxyethyl)-4-methylthiazole

taurine

3-(N-morpholino)propanesulfonate

isethionate

1-butanesulfonate

(R)-S-lactoylglutathione

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

selenide

thiosulfate

OH^-

nitrite

nitrate

hydrogensulfite

hydrogencarbonate

molybdate

iodide

bromide

fluoride

chloride

phosphonate

phosphate

triphosphate

diphosphate

Fe³⁺

Na⁺

ammonium

H⁺

Mo²⁺

Fe²⁺

Co²⁺

glycine betaine

choline

betaine aldehyde hydrate

betaine aldehyde

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

spermidine

2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

sn-glycero-3-phosphocholine

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

acetamide

6-caprolactam

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

nicotinamide

ethene

3-oxo-4-pregnene-20-carboxyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

24-methylidenelophenol

24-methylenecycloartanol

24-methylenecholesterol

4α-methyl-5α-ergosta-8,24-dien-3β-ol

cycloartenol

24-epi-campesterol

campesterol

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

androsta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

4α-methyl-5α-ergosta-8,14,24(28)-trien-3β-ol

obtusifoliol

avenastenone

4α-carboxy-stigmasta-7,24(24¹)-dien-3β-ol

episterone

4α-carboxy-ergosta-7,24(24¹)-dien-3β-ol

cycloeucalenone

5-dehydroavenasterol

ergosta-5,7,24(28)-trien-3β-ol

avenasterol

episterol

4α-carboxy-4β,14α-dimethyl-9β,19-cyclo-5α-ergost-24(24¹)-en-3β-ol

crinosterol

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

(2E,5Z)-tetradecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

3-methylcrotonyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3E)-dec-3-enoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

2-trans-nonenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

4-trans-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

4-cis-undecenoyl-CoA

4-hydroxybenzoyl-CoA

(+)-7-epi-jasmonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

dihomo γ-linolenoyl-CoA

isovaleryl-CoA

isobutanoyl-CoA

2-methylbutanoyl-CoA

3-hydroxyisovaleryl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

methylacrylyl-CoA

3'-dephospho-CoA

2-methylacetoacetyl-CoA

malonyl-CoA

acetyl-CoA

succinyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

phenylacetyl-CoA

2E)-tetradec-2-enoyl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

crotonyl-CoA

(2E)-octadec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

phytanoyl-CoA

(3R)-citramalyl-CoA

(3Z)-dodec-3-enoyl-CoA

oleoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

cerotoyl-CoA

2-carboxy-cerotoyl-CoA

butanoyl-CoA

propanoyl-CoA

hexanoyl-CoA

octanoyl-CoA

decanoyl-CoA

lauroyl-CoA

myristoyl-CoA

icosanoyl-CoA

palmitoyl-CoA

stearoyl-CoA

2-hydroxyphytanoyl-CoA

hexadecanedioyl-CoA

3-oxoadipyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

3-oxododecanoyl-CoA

3-oxooctanoyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-myristoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

all-trans-retinyl palmitate

trans-dienelactone

cis-dienelactone

L-galactono-1,4-lactone

D-glucono-1,5-lactone

FADH₂

FMNH₂

FMN

FAD

(S)-NADHX

(R)-NADHX

NADH

NADPH

NAD⁺

NADP⁺

caldariellaquinol

ubiquinol-10

ubiquinol-7

ubiquinol-6

ubiquinol-8

ubiquinol-9

menaquinol-8

menaquinol-7

menaquinol-9

menaquinol-6

menaquinol-10

menaquinol-11

menaquinol-12

menaquinol-13

demethylmenaquinol-8

demethylmenaquinol-7

demethylmenaquinol-9

demethylmenaquinol-6

demethylmenaquinol-10

demethylmenaquinol-11

demethylmenaquinol-12

demethylmenaquinol-13

3-demethylubiquinol-10

3-demethylubiquinol-7

3-demethylubiquinol-8

3-demethylubiquinol-9

caldariellaquinone

coenzyme A

molybdopterin

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

nicotinate

L-ascorbate

riboflavin

thiamine

pyridoxine 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxal 5'-phosphate

pyridoxine

pyridoxal

pyridoxamine

menadione

all-trans-retinol

(S)-1-pyrroline-5-carboxylate

precorrin-5

precorrin-7

precorrin-8x

precorrin-6B

precorrin-6A

precorrin-3B

precorrin-4

precorrin-3A

precorrin-1

precorrin-2

sirohydrochlorin

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

7,8-dihydroneopterin 2',3'-cyclic phosphate

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydroneopterin

7,8-dihydroneopterin 3'-phosphate

molybdopterin adenine dinucleotide

cyclic pyranopterin phosphate

7,8-dihydropteroate

adenine

2'-deoxyguanosine

2'-deoxyadenosine

guanosine

inosine

xanthosine

adenosine

dAMP

dGMP

dITP

dGTP

dATP

dIDP

dGDP

dADP

IDP

GDP

ADP

IMP

XMP

GMP

AMP

ITP

GTP

ATP

dUDP

dUTP

dCTP

orotate

dCMP

dCDP

CDP

UDP

dTDP

UTP

CTP

uracil

dTMP

dUMP

dTTP

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-mannosamine

UDP-α-D-glucuronate

UDP-α-D-glucose

UDP-α-D-galactose

UDP-α-D-galacturonate

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

dTDP-α-D-glucose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

cytidine

uridine

2'-deoxycytidine

thymidine

2'-deoxyuridine

thymine

UMP

CMP

isoguanine

preQ₁

scopoletin

coumarin

4-methylumbelliferone

preQ₀

(indole-3-yl)acetonitrile

neolinustatin

lotaustralin

linustatin

linamarin

taxiphyllin

acrylonitrile

2-hydroxy-2-methylpropanenitrile

(2R)-2-hydroxy-2-methylbutanenitrile

3-hexaprenyl-4-hydroxybenzoate

2-[(1R,6S)-1,6-dihydroxycyclohexa-2,4-dien-1-yl]acetyl-coA

4-tyrosol

4-hydroxybenzoate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

salicylaldehyde

toluene

3-methoxy-4-hydroxyphenylglycol

vanillyl mandelate

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

benzaldehyde

indole

(indol-3-yl)acetaldehyde

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

menadiol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

3,4-dihydroxyphenylglycol

catechol

3,4-dihydroxyphenylacetate

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxymandelate

protocatechuate

coumarinate

3-hydroxy-trans-cinnamate

2,3-dihydroxy-trans-cinnamate

vanillate

5-chloroprotocatechuate

salicylate

trans-cinnamate

4-aminobenzoate

benzoate

L-α-amino-ε-keto-pimelate

L-serine

β-alanine

(S)-3-amino-2-methylpropanoate

L-proline

L-alanine

L-glutamine

L-leucine

glycine

D-glutamate

L-glutamate

L-lysine

L-arginine

L-histidine

L-aspartate

L-asparagine

L-tyrosine

L-threonine

L-cysteine

L-tryptophan

L-phenylalanine

D-aspartate

D-alanine

L-saccharopine

seleno-L-homocysteine

L-aspartyl-4-phosphate

3-phospho-L-serine

N-formyl-L-glutamate

formyl-L-isoglutamine

N-formimino-L-glutamate

N-acetyl-L-ornithine

N-acetyl-L-methionine

N-acetyl-L-glutamate

N-carbamoyl-L-aspartate

O-acetyl-L-homoserine

L-citrulline

L-valine

L-isoleucine

L-glutamate-5-semialdehyde

hypoglycin A

L-homoserine

O-phospho-L-homoserine

L-aspartate 4-semialdehyde

S-sulfo-L-cysteine

O-succinyl-L-homoserine

L-ornithine

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

L-4-hydroxyglutamate semialdehyde

meso-diaminopimelate

L-selenocysteine

L-methionine

L,L-diaminopimelate

L-cystathionine

L-isoglutamine

chorismate

crocetin

(2Z,4E,7E)-2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioate

(3E)-2-oxohex-3-enedioate

fumarate

succinate

(S)-malate

D-galactarate

D-glucarate

cis-aconitate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

2-hydroxy-4-oxobutane-1,2,4-tricarboxylate

(1E)-4-oxobut-1-ene-1,2,4-tricarboxylate

(1E,3E)-4-hydroxybuta-1,3-diene-1,2,4-tricarboxylate

(2R,3S)-2-methylisocitrate

(2S,3S)-2-methylcitrate

cis-2-methylaconitate

D-threo-isocitrate

(R)-3-hydroxybutanoate

(S)-lactate

(R)-lactate

pyruvate

acetate

formate

propanoate

butanoate

decanoate

laurate

octanoate

(2E,6E)-farnesoate

3-oxoadipate

leukotriene-D4

leukotriene-E4

oleate

(3E,5Z)-tetradecadienoate

apo-4'-lycopenoate

di-homo-γ-linolenate

γ-linolenate

linoleate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

phytenate

arachidate

myristate

stearate

palmitate

D-gluconate

(R)-pantoate

D-tagaturonate

aldehydo-D-glucuronate

aldehydo-D-galacturonate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

2-oxobutanoate

glyoxylate

2-oxoglutarate

4-(methylsulfanyl)-2-oxobutanoate

a coenzyme-A group

methylglyoxal

diacetyl

acetone

6-methoxy-2-all-trans-octaprenyl-1,4-benzoquinone

3-methyl-6-methoxy-2-octaprenyl-1,4-benzoquinone

3-(N-morpholino)propanal

glycolaldehyde

(2E,6E)-farnesal

crocetin dialdehyde

1-propanal

isobutanal

butan-1-al

1-octanal

formaldehyde

acetaldehyde

(S)-lactaldehyde

(R)-lactaldehyde

phytenal

D-glyceraldehyde

α-D-glucopyranose

β-D-glucopyranose

aldehydo-D-mannose

β-D-mannopyranose

α-D-galactopyranose

β-D-galactopyranose

L-sorbosone

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

propan-1-ol

ethanol

methanol

butan-1-ol

phytol

glycerol

D-sorbitol

D-mannitol

3-dehydrosphinganine

3,5-cyclohexadiene-1,2-diol-1-carboxylate

myo-inositol

1D-myo-inositol 2-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 3-monophosphate

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

6-O-trans-keto-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-α-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-oleoyl-sn-glycerol 3-phosphate

dioleoyl phosphatidate

di-trans,octa-cis-undecaprenyl phosphate

trans,octacis-decaprenyl phosphate

geranyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-decaprenyl diphosphate

geranylgeranyl diphosphate

mono-trans,octa-cis-decaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

torulene

apo-4'-lycopenal

all-trans-3,4-didehydrolycopene

4'-apo-β-carotenal

24-ethylidenelophenol

brassicasterol

24-methyldesmosterol

sitosterol

stigmasterol

Δ^24-25-sitosterol

isofucosterol

(3S)-2,3-epoxy-2,3-dihydrosqualene

3-nonaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-decaprenyl-4-hydroxybenzoate

(S)-nicotine

1-(β-D ribofuranosyl)nicotinamide

XLLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XXLG xyloglucan oligosaccharide

XXXG xyloglucan oligosaccharide

maltotriose

maltotetraose

maltoheptaose

maltohexaose

maltopentaose

α-maltose

sucrose

α,α-trehalose

α-lactose

β-D-cellobiose

6_G-kestotriose

1-kestotriose

1,1-kestotetraose

1,6-kestotetraose

6,6-kestotetraose

6-kestotriose

keto-L-sorbose

keto-D-fructose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-glucosamine

L-sorbosone 1,4-lactone

L-sorbosone 2,6-lactone

β-D-fructofuranose

D-xylulose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

3'-ketolactose

3-dehydro-D-glucopyranose

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (mycobacteria)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

sucrose 6^F-phosphate

α,α-trehalose 6-phosphate

CMP-3-deoxy-β-D-manno-octulosonate

ADP-α-D-glucose

GDP-α-D-glucose

GDP-α-D-mannose

GDP-α-D-mannuronate

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

5-phospho-α-D-ribose 1-diphosphate

4-phospho-D-erythronate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

D-fructose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

D-ribulose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

α-D-galactose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

L-gulonate

D-altronate

aldehydo-L-galactonate

cyclic-GMP

5'-deoxyadenosine

1-(5-phospho-β-D-ribosyl)-AMP

pppGpp

ppGpp

adenylo-succinate

1-(5-phospho-β-D-ribosyl)-ATP

8-oxo-GTP

8-oxo-dGTP

2-hydroxy-dATP

5-hydroxy-CTP

reduced β-nicotinamide D-ribonucleotide

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

cyclic di-3',5'-guanylate

hypoglycin B