an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

oxalate

(4-hydroxyphenyl)acetate

4-oxoglutaramate

(3E)-2-oxopent-3-enoate

2,6-dioxo-6-phenylhexa-3-enoate

5-hydroxyindole thiazolidine carboxylate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

H₂O

4-amino-4-deoxychorismate

hydrogen peroxide

2-dehydropantoate

3-methyl-2-oxobutanoate

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2,3-didehydroadipyl-CoA

citrate

oxaloacetate

CO₂

carbon monoxide

4-maleyl-acetoacetate

homogentisate

acetyl phosphate

4-guanidinobutanoate

4-guanidinobutyramide

acrylate

acrylamide

(indol-3-yl)acetamide

propionamide

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

(2S)-2-isopropylmalate

N-methylhydantoin

histidinol

histidinal

S-methyl-5-thio-α-D-ribose 1-phosphate

S-methyl-5'-thioadenosine

5-deoxy-α-ribose 1-phosphate

nicotinate adenine dinucleotide

β-nicotinate D-ribonucleotide

3-dehydroshikimate

3-dehydroquinate

3-phosphooxypyruvate

4-phosphooxy-L-threonine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

5-enolpyruvoyl-shikimate 3-phosphate

N-succinyl-L,L-2,6-diaminopimelate

3-deoxy-D-manno-octulosonate 8-phosphate

phosphoenolpyruvate

3-deoxy-α-D-manno-2-octulosonate

orotidine 5'-phosphate

prephenate

L-arginino-succinate

canavaninosuccinate

O-ureido-L-homoserine

3-demethylubiquinol-6

(S)-3-methyl-2-oxopentanoate

4-methyl-2-oxopentanoate

adenosine 3',5'-bisphosphate

(R)-2,3-dihydroxy-3-methylpentanoate

preuroporphyrinogen

porphobilinogen

coproporphyrinogen III

ethylamine

N-isopropylammelide

hydroxyatrazine

N-(5-phosphoribosyl)-anthranilate

L-canavanine

L-histidinol phosphate

imidazole acetol-phosphate

S-adenosyl 3-(methylsulfanyl)propylamine

carbamoyl phosphate

(R)-4'-phosphopantothenoyl-L-cysteine

(R)-4'-phosphopantothenate

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

(S)-dihydroorotate

glycerone phosphate

3-ureidopropanoate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

xanthine

5-aminolevulinate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

6-phospho D-glucono-1,5-lactone

γ-L-glutamyl 5-phosphate

thiamine phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

2-dehydro-3-deoxy-D-gluconate 6-phosphate

D-gluconate 6-phosphate

D-erythro-imidazole-glycerol-phosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

2-C-methyl-D-erythritol 4-phosphate

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

(indol-3 yl)acetyl-CoA

(indol-3-yl)pyruvate

5-amino-6-(D-ribitylamino)uracil

3'-phosphoadenylyl-sulfate

5-phospho-β-D-ribosylamine

acetoacetate

hydrogenobyrinate a,c-diamide

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

3-dehydro-2-deoxy-D-gluconate

2-deoxygluconate

2-maleylacetate

butyramide

DNA without lesion

(4,5-dihydro-5-oxofuran-2-yl)-acetate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

cis,cis-muconate

(+)-muconolactone

muconolactone

(R)-mandelate

(S)-mandelate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

H₂

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

hypotaurine

γ-butyrobetaine

dimethylsulfoniopropanoate

4-acetamidobutanoate

4-acetamidobutanal

D-glucurono-6,3-lactone

propynoate

prop-2-ynal

3,4-dihydroxyphenylacetaldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

5-hydroxyindole acetate

5-hydroxyindole acetaldehyde

4-imidazoleacetate

imidazole acetaldehyde

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

(E)-2-benzylidenesuccinyl-CoA

4-hydroxy-2-nonenal

urea

(S)-ureidoglycolate

N-succinyl-2-amino-6-ketopimelate

(S)-2,3,4,5-tetrahydrodipicolinate

pyrazine-2-carboxylate

2-oxovalerate

3-ethylmalate

(2S)-2-isopropyl-3-oxosuccinate

succinate semialdehyde

N²-succinylglutamate

N²-succinyl-L-glutamate 5-semialdehyde

α-D-galactosyl-diphosphoundecaprenol

FK-506

31-O-desmethylFK-506

shikimate

3-oxopristanoyl-CoA

4,8,12-trimethyltridecanoyl-CoA

glycolate

trans-O-hydroxybenzylidenepyruvate

prenyl diphosphate

isopentenyl diphosphate

lipid IV_A

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

1-deoxy-L-glycero-tetrulose 4-phosphate

vanillin

4-fumaryl-acetoacetate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

benzoylsuccinyl-CoA

3-oxo-3-phenylpropanoyl-CoA

3α,7α-dihydroxy-24-oxo-5β-cholestanoyl CoA

5-hydroxy-feruloyl-CoA

5-hydroxyferulate

sinapoyl-CoA

sinapate

carbonic acid

S-formylglutathione

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

hydrogenobyrinate

(5R)-5-benzyl-hydantoin

(5S)-5-benzyl-hydantoin

shikimate 3-phosphate

3-(O-geranylgeranyl)-sn-glycerol 1-phosphate

4-prenylphlorisobutyrophenone

itaconate

2-phenylethanol

2-methylbutanal

2-methylbutanol

3-methylbutanal

3-methylbutanol

isobutanol

indole-3-glycol aldehyde

indole-3-glycol

5-hydroxytryptophol

urea-1-carboxylate

sym-homospermidine

propane-1,3-diamine

γ-glutamyl-isopropylamide

isopropylamine

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate

hydroxypyruvate

thiamine diphosphate

glutathione disulfide

N¹-(5-phospho-β-D-ribosyl)glycinamide

arsenite

N-Formyl-L-kynurenine

anthranilate

3-hydroxyanthranilate

N-acetylglutamyl-phosphate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

selenophosphate

N-acetyl-L-glutamate 5-semialdehyde

chloramphenicol

ectoine

(2S)-4-acetamido-2-aminobutanoate

oxalosuccinate

methylamine

O-acetyl-L-serine

2-(α-hydroxyethyl)thiamine diphosphate

3-deoxy-D-arabino-heptulosonate 7-phosphate

4-pyridoxolactone

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

2-iminoacetate

1,6-anhydro-N-acetyl-β-muramate

5-methylsalicylate

4-methylsalicylate

(2-hydroxyphenyl)acetate

α-ribazole 5'-phosphate

5,6-dimethylbenzimidazole

α-ribazole

lipid A disaccharide (E. coli)

lipid X

methylsalicylate

salicyl alcohol

3-oxopropanoate

4'-phosphopantetheine

ammonia

2-phosphoglycolate

isoquinolin-2(1H)-one

isoquinoline

quinolinate

(R)-pantothenate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(4Z)-2-oxohept-4-enedioate

(E)-glutaconate

cyclohexane-1-carbonyl-CoA

pimeloyl-CoA

pimelate

4-methyl-3-oxoadipate

dihydroxyacetone

tryptamine

5-carboxymethyl-2-hydroxymuconate

2-hydroxy-5-carboxymethylmuconate semialdehyde

2-arylpropanoate

2-aryl-2-methylmalonate

diethylphosphate

dimethylthiophosphate

diethylthiophosphate

aminoacetone

nicotine-1'-N-oxide

N,N-dimethylaniline-N-oxide

N,N-dimethylaniline

(1S,4S)-2,5-dichloro-2,5-cyclohexadiene-1,4-diol

(R)-1-amino-2-propanol O-2-phosphate

2-dehydro-6-phospho-D-gluconate

2-keto-D-gluconate

8-amino-7-oxononanoate

cyclohexane-1-carboxylate

crotonate

cyclohex-1,5-diene-1-carbonyl-CoA

6-hydroxycyclohex-1-ene-1-carbonyl-CoA

6-oxocyclohex-1-ene-1-carbonyl-CoA

3-hydroxypimeloyl-CoA

3-oxopimeloyl-CoA

2-hydroxy-6-oxocyclohexane-1-carbonyl-CoA

(S)-1-phenylethanol

4-amino-2-methyl-5-pyrimidinemethanol

2-amino-3-carboxymuconate-6-semialdehyde

α-D-glucosamine 1-phosphate

N-acetyl-D-muramate 6-phosphate

4-aminobutanoate

3'-ketosucrose

dialurate

protoanemonin

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

autoinducer 2

S-ribosyl-L-homocysteine

N⁵-carboxyaminoimidazole ribonucleotide

5-formyl-3-hydroxy-2-methylpyridine-4-carboxylate

3-hydroxy-2-methylpyridine-4,5-dicarboxylate

3-hydroxy-2-methylpyridine-5-carboxylate

(2Z)-2-(acetamidomethylene)succinate

hydrogen selenide

creatinine

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

butanoyl phosphate

N²-succinyl-L-arginine

N²-succinyl-L-ornithine

mercuriphenyl acetate

2-oxopent-4-enoate

(2E)-2-hydroxypenta-2,4-dienoate

N-(γ-L-glutamyl)-L-alaninol

L-alaninol

7-epicholate

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-oxo-L-proline

1,4-dihydroxy-2-naphthoate

urocanate

4-imidazolone-5-propanoate

(S)-4-amino-5-oxopentanoate

glutathioselenol

selenodiglutathione

(2E,6E)-farnesol

(2E,6E)-farnesyl diphosphate

pristanate

L-α-amino-ε-keto-pimelate

L-kynurenine

L-methionine

L-cysteine

L-alanine

L-phenylalanine

L-proline

glycine

L-isoleucine

L-leucine

L-valine

L-tryptophan

L-isoglutamine

L-glutamate

L-glutamine

L-aspartate

L-histidine

L-threonine

L-lysine

L,L-diaminopimelate

L-ornithine

L-aspartyl-4-phosphate

L-serine

L-asparagine

L-arginine

L-2,4-diaminobutanoate

L-tyrosine

L-cystathionine

N-carbamoyl-L-aspartate

formyl-L-isoglutamine

N-formyl-L-glutamate

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-acetyl-L-aspartate

N-formimino-L-glutamate

L-citrulline

L-4-hydroxyglutamate semialdehyde

O-phospho-L-homoserine

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

L-homocysteine

L-aspartate 4-semialdehyde

O-succinyl-L-homoserine

L-homoserine

L-glutamate-5-semialdehyde

L-dopa

L-allo-threonine

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

L-2-amino-3-oxobutanoate

O-acetyl-L-homoserine

3-hydroxy-L-kynurenine

5-hydroxy-L-tryptophan

N-carbamoylglycine

N-acetyl-L-glutamate

sarcosine

3-phospho-L-serine

D-alanine

D-glutamate

N-carbamoylsarcosine

creatine

β-alanine

(S)-3-amino-2-methylpropanoate

(R)-3-amino-2-methylpropanoate

L-threo-3-phenylserine

adenosine 2',3'-cyclic monophosphate

guanosine 2',3'-cyclic monophosphate

2'-deoxyinosine

2'-deoxyadenosine

ppGpp

AMP

ATP

GDP

pppGpp

GTP

ADP

5'-deoxyadenosine

guanosine 3'-monophosphate

adenosine 3'-monophosphate

1-(5-phospho-β-D-ribosyl)-ATP

adenylo-succinate

XMP

dADP

dGDP

IMP

hypoxanthine

dGTP

dATP

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

2'-deoxyguanosine

GMP

dITP

dIDP

ITP

IDP

1-(5-phospho-β-D-ribosyl)-AMP

dGMP

dAMP

5,6-dihydrouracil

5,6-dihydrothymine

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

GDP-α-D-mannose

GDP-α-D-glucose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-α-D-glucose

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-α-D-galactose

UDP-α-D-glucose

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

adenine

guanine

thymine

uracil

cytosine

preQ₁

N¹-ethyladenine

N3-methylcytosine

N¹-methyladenine

cyclic di-3',5'-guanylate

cytidine 2',3'-cyclic monophosphate

uridine 2'3'-cyclic monophosphate

dUMP

dTMP

dCMP

dCDP

dUDP

dTDP

dUTP

dCTP

dTTP

UDP

CDP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

CTP

UTP

UMP

CMP

NADP⁺

NAD⁺

NADPH

NADH

uridine 3'-monophosphate

cytidine-3'-monophosphate

2'-deoxyuridine

thymidine

2'-deoxycytidine

inosine

adenosine

xanthosine

guanosine

uridine

cytidine

5'-deoxy-5'-fluoroadenosine

D-gluconate

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

3-dehydro-D-glucopyranose

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

5-phospho-α-D-ribose 1-diphosphate

4-phospho-D-erythronate

α-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

α-D-ribose-1-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

2-deoxy-α-D-ribose 1-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

sucrose 6^F-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (mycobacteria)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

β-D-fructofuranose

keto-D-fructose

keto-L-sorbose

glycolaldehyde

α-D-xylopyranose

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

β-D-galactopyranose

α-D-galactopyranose

β-D-mannopyranose

β-D-glucopyranose

α-D-glucopyranose

aldehydo-D-mannose

D-glyceraldehyde

D-xylulose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-glucosamine

glycerol

D-sorbitol

D-mannitol

galactitol

α-Kdo-(2→6)-lipid IV_A

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

sucrose

phlorisovalerophenone

salicylaldehyde

phytyl diphosphate

all-trans-retinol

all-trans-retinyl palmitate

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

(3S)-linalool

(3R)-linalool

geranyl diphosphate

apo-4'-lycopenal

apo-4'-lycopenoate

vanillylamine

(S)-nicotine

miraxanthin V

betalamate

deoxycohumulone

4-prenylphlorisovalerophenone

deoxyhumulone

(3E)-dec-3-enoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

2-trans-nonenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

4-trans-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

4-cis-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

(2E,5E)-dodeca-2,5-dienoyl-CoA

2-trans, 5-cis, 7-trans-tetradecatrienoyl-CoA

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

(3E)-undec-3-enoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

(3E)-tetradec-3-enoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

geranylgeranyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-nonaprenyl diphosphate

3-decaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-hexaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenol

1-oleoyl-2-palmitoyl-phosphatidylglycerol

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

dioleoyl phosphatidate

1-oleoyl-2-lyso-glycerone phosphate

1-oleoyl-sn-glycerol 3-phosphate

myo-inositol

1D-myo-inositol 1-monophosphate

1D-myo-inositol 3-monophosphate

protocatechuate

catechol

3,4-dihydroxyphenylacetate

3,4-dihydroxymandelate

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylglycol

biphenyl-2,3-diol

4-chlorocatechol

4-methylcatechol

dopamine

1-octanol

phytol

propan-1-ol

ethanol

butan-1-ol

methanol

(2E,6E)-farnesal

L-2-aminopropionaldehyde

fluoroacetaldehyde

methylglyoxal

phenylacetaldehyde

(4-hydroxyphenyl)acetaldehyde

benzaldehyde

phytenal

(S)-lactaldehyde

acetaldehyde

1-octanal

isobutanal

formaldehyde

1-propanal

butan-1-al

2,5-dichloro-p-quinone

menadione

caldariellaquinone

diacetyl

acetophenone

a coenzyme-A group

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

pyruvate

2-oxobutanoate

2-oxoglutarate

glyoxylate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

4-coumarate

salicylate

4-aminobenzoate

benzoate

acetate

orotate

(R)-pantoate

L-carnitine

allantoate

fluoroacetate

(S)-1-pyrroline-5-carboxylate

palmitate

octanoate

decanoate

butanoate

stearate

linoleate

oleate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

α-linolenate

γ-linolenate

(3E,5Z)-tetradecadienoate

di-homo-γ-linolenate

phytenate

(15Z)-tetracosenoate

(2E,6E)-farnesoate

leukotriene-E4

leukotriene-D4

3-oxoadipate

3-oxo-3-phenylpropanoate

formate

propanoate

(R)-lactate

(S)-lactate

(2R,3S)-2-methylisocitrate

(R)-2-hydroxybutanoate

(R)-2-hydroxyglutarate

(R)-glycerate

(R)-3-hydroxybutanoate

cis-aconitate

3-carboxy-cis,cis-muconate

cis-2-methylaconitate

(2S,3S)-2-methylcitrate

D-threo-isocitrate

3-(carbamoylamino)-2-methylpropanoate

chorismate

D-glucarate

succinate

fumarate

(S)-malate

4-hydroxybenzoate

2-[(1R,6S)-1,6-dihydroxycyclohexa-2,4-dien-1-yl]acetyl-coA

4-tyrosol

urate

(2E,4E)-6-(2-aminophenyl)-2-hydroxy-6-oxohexa-2,4-dienoate

2'-aminobiphenyl-2,3-diol

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

ethylbenzene

benzene

cyanuric acid

ferulate

trans-caffeate

5-chlorosalicylate

4-chlorosalicylate

2-phenylethylamine

serotonin

phenol

4-nitrophenol

4-aminophenol

4-methylphenol

menadiol

2,5-dichloro-p-quinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

caldariellaquinol

3-demethylubiquinol-9

3-demethylubiquinol-8

3-demethylubiquinol-7

3-demethylubiquinol-10

demethylmenaquinol-7

demethylmenaquinol-6

demethylmenaquinol-8

menaquinol-7

menaquinol-6

menaquinol-8

ubiquinol-9

ubiquinol-8

ubiquinol-6

ubiquinol-7

ubiquinol-10

indole

(indol-3-yl)acetaldehyde

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

methyl parathion

parathion

amino-parathion

vanillyl mandelate

3-methoxy-4-hydroxyphenylglycol

atrazine

propionitrile

acrylonitrile

(indole-3-yl)acetonitrile

3-cyanopyridine

hydrogen cyanide

preQ₀

n-butyronitrile

2-hydroxychromene-2-carboxylate

7,8-dihydrolumazine

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydropterin

7,8-dihydromonapterin

7,8-dihydroneopterin

7,8-dihydroneopterin 3'-phosphate

7,8-dihydroneopterin 3'-triphosphate

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

riboflavin

FAD

FMN

FADH₂

FMNH₂

reduced riboflavin

6,7-dimethyl-8-(1-D-ribityl)lumazine

9H carbazole

hydantoin

cob(I)alamin

adenosylcobalamin

cobyrinate

sirohydrochlorin

precorrin-6A

precorrin-6B

precorrin-8x

precorrin-7

precorrin-4

precorrin-3B

precorrin-5

precorrin-2

precorrin-1

cobalt-precorrin-6A

cobalt-precorrin-5B

cobalt-precorrin-5A

cobalt-precorrin-4

cobalt-precorrin-6B

cobalt-precorrin-8

cobalt-precorrin-7

cobalt-precorrin-3

precorrin-3A

nicotinamide

nicotinate

thiamine

pyridoxal 5'-phosphate

pyridoxine 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxal

pyridoxine

pyridoxamine

4-pyridoxate

coenzyme A

(R)-NADHX

(S)-NADHX

glycine betaine

D-glucono-1,5-lactone

trans-dienelactone

cis-dienelactone

formyl-CoA

oxalyl-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

(3S)-hydroxyadipyl-CoA

(E)-2-methylcrotonoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-hydroxyisovaleryl-CoA

acetyl-CoA

malonyl-CoA

2-methylacetoacetyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

succinyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

4-hydroxybenzoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

(+)-7-epi-jasmonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

L-carnitinyl-CoA

γ-butyrobetainyl-CoA

(2E,5Z)-tetradecenoyl-CoA

phenylacetyl-CoA

(2R,3S)-β-methylmalyl-CoA

3'-dephospho-CoA

benzoyl-CoA

chenodeoxycholoyl-CoA

choloyl-CoA

3α,7α,12α-trihydroxy-24-oxo-5-β-cholestanoyl CoA

trans-caffeoyl-CoA

glutaryl-CoA

(E)-glutaconyl-CoA

isobutanoyl-CoA

itaconyl-CoA

trans-feruloyl-CoA

dihomo γ-linolenoyl-CoA

3-methylglutaconyl-CoA

3-methylcrotonyl-CoA

isovaleryl-CoA

(R)-2-hydroxyglutaryl-CoA

crotonobetainyl-CoA

2-methylbutanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

3-oxoadipyl-CoA

4-methyl-3-oxoadipyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-myristoyl-CoA

3-oxo-palmitoyl-CoA

3-oxooctadecanoyl-CoA

3-oxooctanoyl-CoA

3-oxododecanoyl-CoA

3-oxodecanoyl-CoA

3-oxohexanoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

stearoyl-CoA

palmitoyl-CoA

pristanoyl-CoA

octanoyl-CoA

decanoyl-CoA

hexanoyl-CoA

lauroyl-CoA

propanoyl-CoA

butanoyl-CoA

cerotoyl-CoA

2-carboxy-cerotoyl-CoA

(Z)-15-tetracosenoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(3R)-3-hydroxypentanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

(S)-malyl-CoA

phytenoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(2E)-octadec-2-enoyl-CoA

crotonyl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

(indol-3-yl)acetate

phenylacetate

methyl (indol-3-yl)acetate

(+)-7-epi-jasmonate

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

3α,7α,12β-trihydroxy-5β-cholan-24-oate

cholate

glycocholate

isocholate

3-dehydrocholate

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

pyrazinamide

(S)-(+)-allantoin

acetamide

3-chloro-cis,cis-muconate

choline sulfate

choline

betaine aldehyde

betaine aldehyde hydrate

agmatine

spermidine

putrescine

N-acetylputrescine

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

2-iminopropanoate

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

selenide

thiosulfate

nitrite

hydrogensulfite

hydrogencarbonate

molybdate

superoxide

phosphonate

phosphate

diphosphate

triphosphate

chloride

Fe³⁺

Cr⁶⁺

Cr³⁺

H⁺

ammonium

Hg²⁺

Co²⁺

Fe²⁺

Mn²⁺

Ni²⁺

Zn²⁺

S-(hydroxymethyl)glutathione

3-dimethylsulfoniopropionaldehyde

3-(methylsulfanyl)propanal

methionol

dimethyl sulfide

glutathione

(R)-S-lactoylglutathione

3-sulfopyruvate

L-cysteate

2-sulfinoacetaldehyde

sulfoacetaldehyde

taurine

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

thiocyanate

methanethiol

S-sulfanylglutathione

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

chloramphenicol 3-acetate

paraoxon

nitric oxide

2-methoxy-6-(all-trans-octaprenyl)phenol

(S)-3-hydroxy-isobutanoate

5,10-methenyltetrahydrofolate mono-L-glutamate

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(2R)-2,3-dihydroxy-3-methylbutanoate

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

sn-glycerol 1-phosphate

S⁰

oxygen

hydrogen sulfide

Hg⁰

protoporphyrin IX

protoporphyrinogen IX

uroporphyrinogen-III

coproporphyrinogen I

uroporphyrinogen-I

siroheme

protoheme

N₂

adenosylcobinamide

cob(I)inamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

cob(II)yrinate a,c-diamide

adenosylcobyrate

adenosylcobinamide-GDP

adenosyl-cobinamide phosphate

cob(II)yrinate c-monoamide

adenosylcobalamin 5'-phosphate

cobalt-sirohydrochlorin

cobalt-factor III

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal

2-iminosuccinate

2-iminobutanoate

L-cysteinylglycine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

(R)-4-hydroxymandelate

(S)-4-hydroxymandelate