ID Name References
C1

an oxidized electron donor

C2

a reduced electron donor

C3

a deaminated amino group acceptor

C4

an aminated amino group acceptor

C5

Charged-LEU-tRNAs

C6

LEU-tRNAs

C7

a 2-oxo acid

C8

an amino acid

C9

an acyl-CoA

C10

a carboxylate

C11

an oxidized ferredoxin [iron-sulfur] cluster

C12

a reduced ferredoxin [iron-sulfur] cluster

C13

NAD(P)H

C14

NAD(P)+

C15

an L-tyrosyl-[tRNAtyr]

C16

a tRNAtyr

C17

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

C18

4α,14α-dimethyl-porifersta-8,25(27)-dienol

C24

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

C26

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

C27

isoshowacene

C29

2-hydroxyhexadecanal

C30

16-sinapoyloxypalmitate

C31

3-methylquinolin-2-ol

C32

(22R)-hydroxycholesterol

C37

N-(2-methylpropyl)hydroxylamine

C38

chloroeremomycin

C39

3-hydroxy-3-methylbutanoate

C40

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C41

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C42

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C43

rhamnosyl tetracyclic spinosyn pseudoaglycone

C44

rhamnosyl tricyclic spinosyn pseudoaglycone

C45

spinosyn tricyclic macrolactone

C46

11-dehydro-15-oxo spinosyn macrolactone

C47

15-oxo spinosyn macrolactone

C48

spinosyn macrolactone

C51

diethylamine N-oxide

C52

triethylamine N-oxide

C53

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

C55

nitroxyl

C57

trans,octacis-decaprenylphospho-β-D-arabinofuranose

C58

1,3-dihydro-2H-imidazol-2-one

C63

2-phenylethyl β-D-glucopyranoside

C64

formyl hopane

C65

ribosyl hopane

C66

adenosyl hopane

C70

(2Z)-2-hydroxypenta-2,4-dienoate

C72

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

C73

(2Z)-2,4-dihydroxypent-2-enoate

C75

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

C76

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

C77

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

C79

(+)-3'-hydroxylarreatricin

C80

(+)-larreatricin

C81

2-trans,4-trans-xanthoxin

C1186

5-oxo-L-proline

C335

7-epicholate

C908

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

C4690

selenodiglutathione

C4688

glutathioselenol

C4674

glutathione disulfide

C11794

3'-phosphoadenylyl-sulfate

C12494

N-acetyl-D-muramate 6-phosphate

C1283

4-maleyl-acetoacetate

C12171

homogentisate

C12409

creatinine

C12174

4-amino-2-methyl-5-pyrimidinemethanol

C638

5-(methylsulfanyl)-ribulose 1-phosphate

C12029

S-ribosyl-L-homocysteine

C12324

autoinducer 2

C11868

N2-succinyl-L-ornithine

C14075

N2-succinyl-L-arginine

C12351

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

C1268

(R)-4'-phosphopantothenate

C352

2-iminoacetate

C12392

D-glycero-β-D-manno-heptose 1,7-bisphosphate

C12393

D-glycero-β-D-manno-heptose 1-phosphate

C12164

H2

C927

carbon monoxide

C6597

3-ureidopropanoate

C1550

2-amino-3-carboxymuconate-6-semialdehyde

C6030

core oligosaccharide-lipid A (E. coli K-12 core type)

C13986

pseudouridine

C13941

(2Z)-2-(acetamidomethylene)succinate

C606

3-hydroxy-2-methylpyridine-5-carboxylate

C14217

3-hydroxy-2-methylpyridine-4,5-dicarboxylate

C13533

5-formyl-3-hydroxy-2-methylpyridine-4-carboxylate

C6359

(S)-2-acetolactate

C6369

(S)-2-aceto-2-hydroxybutanoate

C11710

(R)-4'-phosphopantothenoyl-L-cysteine

C14179

4-acetamidobutanal

C14137

4-acetamidobutanoate

C13638

N2-succinyl-L-glutamate 5-semialdehyde

C11869

N2-succinylglutamate

C3343

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

C1353

3-phosphooxypyruvate

C11760

prephenate

C12415

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

C12626

3-oxo-5,6-didehydrosuberyl-CoA

C12628

2-oxepin-2(3H)-ylideneacetyl-CoA

C12630

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

C949

lipid X

C996

adenosine 5'-phosphosulfate

C192

adenosine 5'-phosphoselenate

C12288

(E)-2-benzylidenesuccinyl-CoA

C922

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

C15306

2,3-didehydroadipyl-CoA

C371

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

C2586

(E)-4-coumaroyl-CoA

C14111

4-pyridoxolactone

C1449

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

C11748

pseudouridine 5'-phosphate

C12230

formamide

C12158

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

C1538

2-C-methyl-D-erythritol 4-phosphate

C1303

4-guanidinobutyramide

C891

citrate

C13635

β-D-ribosylnicotinate

C7865

urea

C11639

succinate semialdehyde

C10260

ADP-D-glycero-β-D-manno-heptose

C859

31-O-desmethylFK-506

C857

FK-506

C7349

chloramphenicol

C1440

nigerose

C12326

1-deoxy-L-glycero-tetrulose 4-phosphate

C4201

squalene

C4037

presqualene diphosphate

C11990

malonate

C8399

5-hydroxytryptophol

C8407

5-hydroxyindole acetaldehyde

C8344

indole-3-glycol

C8410

indole-3-glycol aldehyde

C13799

2-methylbutanol

C11976

2-methylbutanal

C12102

isobutanol

C423

3-methoxy-4-hydroxyphenylglycolaldehyde

C13800

3-methylbutanol

C13801

3-methylbutanal

C13798

2-phenylethanol

C13689

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

C1363

(4,5-dihydro-5-oxofuran-2-yl)-acetate

C13950

pimeloyl-CoA

C14005

prephytoene diphosphate

C8938

oxalate

C11881

N-methylhydantoin

C1180

N1-(5-phospho-β-D-ribosyl)glycinamide

C14177

propane-1,3-diamine

C14935

sym-homospermidine

C14074

prenyl diphosphate

C11857

β-nicotinate D-ribonucleotide

C11715

quinolinate

C9422

nicotinate adenine dinucleotide

C12218

α-D-glucosamine 1-phosphate

C13716

4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate

C1182

N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide

C11774

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

C11874

N-succinyl-2-amino-6-ketopimelate

C11873

N-succinyl-L,L-2,6-diaminopimelate

C11800

(R)-pantothenate

C12162

hydrogen peroxide

C13627

DNA without lesion

C12492

1,6-anhydro-N-acetyl-β-muramate

C13786

(2S)-2-isopropyl-3-oxosuccinate

C3319

4-methyl-2-oxopentanoate

C506

3-ethylmalate

C3259

2-oxovalerate

C1438

(2S)-2-isopropylmalate

C1530

(2R,3S)-3-isopropylmalate

C13417

2-isopropylmaleate

C1427

5-enolpyruvoyl-shikimate 3-phosphate

C12074

3-deoxy-D-manno-octulosonate 8-phosphate

C1519

2-hydroxy-5-(methylsulfanyl)-3-oxopent-1-enyl 1-phosphate

C13630

1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one

C13546

5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate

C191

L-selenocystathionine

C1171

2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine

C1172

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

C1528

2-dehydropantoate

C12192

carbonic acid

C11812

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

C571

4-hydroxy-2-nonenal

C1321

4-aminobutanoate

C1265

4-phosphooxy-L-threonine

C1631

3-amino-1-hydroxyacetone 1-phosphate

C1548

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

C12078

itaconate

C1431

3-dehydroshikimate

C13854

hydrogen selenide

C1102

O-acetyl-L-serine

C12333

dihydrolipoamide

C12020

lipoamide

C1552

2-(α-hydroxyethyl)thiamine diphosphate

C11604

thiamine diphosphate

C1078

(S)-2-amino-6-oxohexanoate

C1130

8-amino-7-oxononanoate

C3264

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

C12350

7,8-diaminopelargonate

C12355

dethiobiotin

C11606

thiamine phosphate

C1020

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

C1018

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

C3279

2-oxopent-4-enoate

C3269

(S)-4-hydroxy-2-oxopentanoate

C2191

carbamoyl phosphate

C6614

O-ureido-L-homoserine

C1196

S-methyl-5'-thioadenosine

C14053

S-methyl-5-thio-α-D-ribose 1-phosphate

C15238

5-deoxy-α-ribose 1-phosphate

C10349

glycerone phosphate

C1108

acetyl phosphate

C14003

N-acetyl-L-glutamate 5-semialdehyde

C11836

hydroxypyruvate

C11634

tartronate semialdehyde

C6444

oxaloacetate

C873

coproporphyrinogen III

C3850

5-amino-6-(D-ribitylamino)uracil

C3829

5-amino-6-(5-phospho-D-ribitylamino)uracil

C10274

5-amino-6-(5-phospho-D-ribosylamino)uracil

C12146

hydroxylamine

C11946

N-(5-phosphoribosyl)-anthranilate

C1002

anthranilate

C11493

2-phosphoglycolate

C11483

glycolate

C12352

(S)-dihydroorotate

C12364

isopentenyl diphosphate

C11930

N-acetylglutamyl-phosphate

C584

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C582

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C435

bisorganyltrisulfane

C12274

enol-phenylpyruvate

C585

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C583

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C446

5-hydroxyindole thiazolidine carboxylate

C1010

ammonia

C14152

pyruvic oxime

C13702

1-piperideine 6-carboxylate

C1305

4-fumaryl-acetoacetate

C6361

acetoacetate

C11826

oxalosuccinate

C13225

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

C12368

(S)-2,3,4,5-tetrahydrodipicolinate

C12390

D-erythro-imidazole-glycerol-phosphate

C12125

imidazole acetol-phosphate

C12044

L-histidinol phosphate

C12178

histidinal

C12176

histidinol

C11479

phosphoenolpyruvate

C10261

ADP-L-glycero-β-D-manno-heptose

C2580

methylsalicylate

C15056

salicyl alcohol

C1325

4-amino-4-deoxychorismate

C12048

γ-L-glutamyl 5-phosphate

C1429

3-deoxy-D-arabino-heptulosonate 7-phosphate

C12369

3-dehydroquinate

C11653

shikimate

C11652

shikimate 3-phosphate

C1621

(R)-2,3-dihydroxy-3-methylpentanoate

C3417

(S)-3-methyl-2-oxopentanoate

C3262

3-methyl-2-oxobutanoate

C12056

L-arginino-succinate

C932

canavaninosuccinate

C933

L-canavanine

C10794

lipid A disaccharide (E. coli)

C6099

lipid IVA

C3684

3-deoxy-α-D-manno-2-octulosonate

C11832

orotidine 5'-phosphate

C928

CO2

C1184

5-phospho-β-D-ribosylamine

C11543

H2O

C11802

4'-phosphopantetheine

C1291

(4-hydroxyphenyl)acetate

C3338

2-oxoglutaramate

C9077

(2E,6E)-farnesyl diphosphate

C6043

4-methylphenol

C12247

L-homocysteine

C4632

(glutathion-S-yl)-4-hydroxy-2-nonenal

C10799

DNA with lesion

C11480

phenylacetate

C9811

cob(II)yrinate c-monoamide

C9828

cob(II)yrinate a,c-diamide

C9821

cobalt-factor III

C9822

cobalt-precorrin-3

C9845

cobalt-sirohydrochlorin

C9837

cobalt-precorrin-7

C9866

cobalt-precorrin-8

C9842

cobalt-precorrin-6B

C9813

cobalt-precorrin-5B

C9818

cobalt-precorrin-6A

C9847

cobalt-precorrin-4

C9871

cobalt-precorrin-5A

C9861

cobyrinate

C9850

chlorophyllide a

C9836

protochlorophyllide a

C9865

Mg-protoporphyrin

C9817

3,8-divinyl protochlorophyllide a

C9860

131-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

C9812

magnesium-protoporphyrin IX 13-monomethyl ester

C9835

131-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

C6624

protoheme

C13422

hydrogen cyanide

C7676

protoporphyrin IX

C7658

uroporphyrinogen-III

C7666

protoporphyrinogen IX

C7632

siroheme

C7121

oxygen

C7118

hydrogen sulfide

C8419

sn-glycerol 3-phosphate

C6427

2,3-diphospho-D-glycerate

C11476

(R)-glycerate

C6437

3-phospho-D-glyceroyl-phosphate

C6425

2-phospho-D-glycerate

C6438

3-phospho-D-glycerate

C2151

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

C2150

(2R)-2,3-dihydroxy-3-methylbutanoate

C6644

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

C2765

1-oleoyl-2-lyso-glycerone phosphate

C6741

(S)-methylmalonate-semialdehyde

C6763

(R)-methylmalonate-semialdehyde

C8958

superoxide

C6317

5,10-methenyltetrahydrofolate mono-L-glutamate

C6290

(S)-3-hydroxy-isobutanoate

C6287

2-octaprenylphenol

C13354

preQ0

C13366

(indole-3-yl)acetonitrile

C12718

molybdopterin

C10614

coenzyme A

C6003

guanylyl molybdenum cofactor

C6007

MoO2-molybdopterin cofactor

C10597

7,8-dihydrofolate monoglutamate

C7134

tetrahydropteroyl tri-L-glutamate

C7129

5,6,7,8-tetrahydrofolate

C8566

5-methyltetrahydropteroyl tri-L-glutamate

C8565

5-methyltetrahydropteroyl mono-L-glutamate

C414

10-formyl-tetrahydrofolate mono-L-glutamate

C6250

5,10-methylenetetrahydropteroyl mono-L-glutamate

C4599

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

C10053

FAD

C10050

FADH2

C10049

FMNH2

C10052

FMN

C5392

(S)-NADHX

C5394

(R)-NADHX

C1863

demethylmenaquinol-8

C5563

ubiquinol-10

C5535

ubiquinol-7

C5543

ubiquinol-8

C5551

ubiquinol-9

C1680

menaquinol-8

C1866

3-demethylubiquinol-10

C1865

3-demethylubiquinol-7

C1867

3-demethylubiquinol-8

C1868

3-demethylubiquinol-9

C4018

NADP+

C4020

NAD+

C14500

NADH

C14497

NADPH

C10988

riboflavin

C10994

thiamine

C4210

pyridoxal 5'-phosphate

C4184

4-pyridoxate

C4208

pyridoxine

C4216

pyridoxamine

C4200

pyridoxal

C4214

pyridoxine 5'-phosphate

C10966

all-trans-retinol

C1689

trimethyl sulfonium

C7014

sulfate

C7016

sulfite

C7017

selenite

C7020

selenate

C7024

thiosulfate

C7030

nitrate

C7034

hydrogensulfite

C7036

hydrogencarbonate

C7057

molybdate

C7006

chloride

C6762

phosphonate

C6097

phosphate

C6094

triphosphate

C6093

diphosphate

C7864

Fe3+

C11011

Cu2+

C11023

Fe2+

C11009

Mg2+

C11006

Co2+

C11001

Mo2+

C4320

H+

C4328

ammonium

C4318

K+

C4606

S-(hydroxymethyl)glutathione

C4734

dimethyl sulfide

C4704

methionol

C4768

3-(methylsulfanyl)propanal

C4678

glutathione

C4580

(R)-S-lactoylglutathione

C5744

5-(2-hydroxyethyl)-4-methylthiazole

C5753

4-methyl-5-(2-phosphooxyethyl)thiazole

C5750

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

C5759

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

C12587

L-cysteate

C12637

3-sulfopyruvate

C3978

thiocyanate

C3998

methanethiol

C4644

S-sulfanylglutathione

C6708

2-iminopropanoate

C6524

2-aminoprop-2-enoate

C6526

(2Z)-2-aminobut-2-enoate

C10301

agmatine

C3574

spermidine

C3548

putrescine

C4334

1-oleoyl-2-palmitoyl-phosphatidylglycerol

C6569

D-sorbitol

C6571

L-iditol

C3449

butan-1-ol

C3450

ethanol

C3447

propan-1-ol

C3448

methanol

C14807

phytol

C10527

myo-inositol

C13576

1D-myo-inositol 1-monophosphate

C13584

1D-myo-inositol 4-monophosphate

C13573

1D-myo-inositol 3-monophosphate

C13592

1D-myo-inositol 2-monophosphate

C13588

1D-myo-inositol 6-monophosphate

C13580

1D-myo-inositol 5-monophosphate

C6488

phytate

C6478

D-myo-inositol (1,2,3,4,5)-pentakisphosphate

C6475

D-myo-inositol (1,2,4,5,6)-pentakisphosphate

C6477

D-myo-inositol (1,2,3,5,6) pentakisphosphate

C11421

protocatechuate

C2763

3,4-dihydroxyphenylglycol

C2758

3,4-dihydroxyphenylglycolaldehyde

C4800

3α,7α,12β-trihydroxy-5β-cholan-24-oate

C4743

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

C6306

3-dehydrocholate

C6352

isocholate

C6358

glycocholate

C6332

cholate

C9098

methyl (indol-3-yl)acetate

C9096

(indol-3-yl)acetate

C11510

5-chloro-5-deoxy-D-ribonate

C3337

5-chloro-4-hydroxy-2-oxopentanoate

C8033

5-amino-4-imidazolecarboxyamide

C8025

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

C8014

phosphoribulosylformimino-AICAR-phosphate

C8043

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

C3536

L-α-amino-ε-keto-pimelate

C5579

L-serine

C11444

N-carbamoylsarcosine

C11441

β-alanine

C11433

(S)-3-amino-2-methylpropanoate

C8797

D-glutamate

C5607

L-glutamate

C5605

L-histidine

C5584

L-lysine

C5642

L-arginine

C5581

L-proline

C5597

L-alanine

C12067

glycine

C5588

L-leucine

C5609

L-glutamine

C5596

L-aspartate

C5612

L-cysteine

C5573

L-tyrosine

C5643

L-asparagine

C5577

L-threonine

C2469

L-phenylalanine

C5575

L-tryptophan

C8796

D-proline

C12223

D-ornithine

C8807

D-lysine

C8799

D-alanine

C12073

L-aspartyl-4-phosphate

C12063

seleno-L-homocysteine

C12165

2-hydroxy-5-oxoproline

C3628

sarcosine

C13322

N-carbamoyl-L-aspartate

C15000

N-acetyl-L-ornithine

C14976

N-acetyl-L-methionine

C14973

N-acetyl-L-glutamate

C11955

O-acetyl-L-homoserine

C3402

3-phospho-L-serine

C5603

L-isoleucine

C5592

L-selenocysteine

C5571

L-valine

C5583

L-methionine

C5580

L,L-diaminopimelate

C5595

L-cystathionine

C12231

L-ornithine

C12303

L-citrulline

C12227

O-succinyl-L-homoserine

C12239

L-aspartate 4-semialdehyde

C2426

S-sulfo-L-cysteine

C12237

L-canaline

C12245

L-homoserine

C12229

O-phospho-L-homoserine

C15292

S-adenosyl-L-methionine

C12203

S-adenosyl-L-homocysteine

C12233

L-glutamate-5-semialdehyde

C5585

meso-diaminopimelate

C2488

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

C8950

chorismate

C6442

succinate

C6443

fumarate

C2802

(S)-malate

C6186

(S)-lactate

C6185

(R)-lactate

C11517

acetate

C3308

pyruvate

C3421

formate

C3409

octanoate

C6371

3-oxoadipate

C3315

3-(4-hydroxyphenyl)pyruvate

C3345

3-phenyl-2-oxopropanoate

C3086

4-(methylsulfanyl)-2-oxobutanoate

C3351

glyoxylate

C3301

2-oxoglutarate

C3257

2-oxobutanoate

C11429

salicylate

C8974

4-aminobenzoate

C8968

benzoate

C3383

palmitate

C13260

phytenate

C13298

(3E,5Z)-tetradecadienoate

C5001

apo-4'-lycopenoate

C8536

3-carboxy-cis,cis-muconate

C8534

cis-aconitate

C8531

D-threo-isocitrate

C11485

D-gluconate

C11482

(R)-pantoate

C11481

orotate

C4985

(S)-1-pyrroline-5-carboxylate

C2040

diacetyl

C6090

methylglyoxal

C6829

salicylaldehyde

C2858

glycolaldehyde

C14804

phytenal

C3485

butan-1-al

C3483

formaldehyde

C3529

1-octanal

C3523

1-propanal

C3494

isobutanal

C3500

acetaldehyde

C6246

(S)-lactaldehyde

C3649

benzaldehyde

C3641

(4-hydroxyphenyl)acetaldehyde

C3647

phenylacetaldehyde

C7087

α-D-glucopyranose

C7085

β-D-glucopyranose

C2065

aldehydo-D-ribose

C2061

α-D-ribofuranose

C2062

β-D-ribofuranose

C8545

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanine

C8537

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysine

C2576

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

C8496

N-acetyl-L-glutaminyl-L-glutamine

C8498

N-acetyl-L-glutaminyl-L-glutamine amide

C1328

L-cysteinylglycine

C8518

γ-L-glutamyl-L-cysteine

C1434

D-alanyl-D-alanine

C2562

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

C4086

1-(β-D ribofuranosyl)nicotinamide

C11619

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

C8305

CMP-3-deoxy-β-D-manno-octulosonate

C8423

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C10343

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C1890

dTDP-3-amino-3,6-dideoxy-α-D-galactopyranose

C1885

dTDP-3-dehydro-6-deoxy-α-D-galactopyranose

C1939

dTDP-α-D-glucose

C1930

dTDP-β-L-rhamnose

C1896

dTDP-4-dehydro-β-L-rhamnose

C1015

GDP-α-D-glucose

C10263

ADP-α-D-glucose

C9884

ADP-D-ribose

C7804

UDP-α-D-galactofuranose

C7776

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

C8666

UDP-α-D-galactose

C7780

UDP-α-D-glucose

C7782

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

C7814

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

C7742

UDP-N-acetyl-α-D-muramoyl-L-alanine

C7824

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

C7808

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

C7822

UDP-N-acetyl-α-D-muramate

C7734

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

C5849

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

C7444

UDP-N-acetyl-α-D-glucosamine

C5848

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C5150

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

C5090

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C5094

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C6673

sucrose 6F-phosphate

C10374

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

C10381

a peptidoglycan dimer (mycobacteria)

C10362

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

C10372

a peptidoglycan dimer (S. aureus)

C10379

a peptidoglycan dimer (E. faeciums)

C10364

a peptidoglycan with D,D cross-links (mycobacteria)

C10383

a peptidoglycan with L,D cross-links (mycobacteria)

C5529

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

C3120

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C361

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

C13230

a peptidoglycan dimer (meso-diaminopimelate containing)

C14591

a peptidoglycan with D,D cross-link (S. aureus)

C14587

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

C3137

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C3138

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

C8811

α-D-glucopyranose 1-phosphate

C5615

D-glyceraldehyde 3-phosphate

C10356

4-phospho-D-erythronate

C10350

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

C15289

D-sedoheptulose 7-phosphate

C10340

D-erythrose 4-phosphate

C10338

5-phospho-α-D-ribose 1-diphosphate

C10326

β-D-fructose 1,6-bisphosphate

C8708

1-deoxy-D-xylulose 5-phosphate

C8704

D-xylulose 5-phosphate

C8700

aldehydo-D-arabinose 5-phosphate

C10604

D-ribulose 5-phosphate

C10330

6-deoxy-5-ketofructose 1-phosphate

C15303

D-fructose 6-phosphate

C2989

β-D-fructofuranose 6-phosphate

C2123

β-D-glucose 6-phosphate

C2125

α-D-glucose 6-phosphate

C8819

L-fuculose 1-phosphate

C2129

β-D-glucopyranose 1-phosphate

C3186

N-acetyl-α-D-glucosamine 1-phosphate

C2057

α-D-ribose-1-phosphate

C8835

β-D-fructofuranose

C5458

keto-L-sorbose

C2012

keto-D-fructose

C9477

N-acetyl-α-D-muramoyl-L-alanine(1-)

C15288

N-acetylmuramate

C5286

N-acetyl-β-D-glucosamine

C10689

maltotetraose

C10688

maltotriose

C10692

maltoheptaose

C10691

maltohexaose

C10690

maltopentaose

C10693

sucrose

C10229

galactosyl-glucosyl-(heptosyl)3-Kdo2-lipid A-bisphosphate

C6026

galactosyl-(glucosyl)3-(heptosyl)3-Kdo2-lipid A-bisphosphate

C10231

glucosyl-(heptosyl)3-Kdo2-lipid A-phosphate

C10232

glucosyl-(heptosyl)2-Kdo2-lipid A-phosphate

C10233

glucosyl-(heptosyl)2-Kdo2-lipid A

C10234

(heptosyl)2-Kdo2-lipid A

C10228

galactosyl-(glucosyl)2-(heptosyl)3-Kdo2-lipid A-bisphosphate

C10230

glucosyl-(heptosyl)3-Kdo2-lipid A-bisphosphate

C10226

α-Kdo-(2→6)-lipid IVA

C10224

α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A

C10235

heptosyl-Kdo2-lipid A

C10223

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IVA

C10227

heptosyl-Kdo2-lipid IVA

C6596

2-iminosuccinate

C6599

2-iminobutanoate

C4922

isobutanoyl-CoA

C5313

2-methylbutanoyl-CoA

C5314

2-methylacetoacetyl-CoA

C5014

phenylacetyl-CoA

C4911

methylacrylyl-CoA

C4945

(2E,5Z)-tetradecenoyl-CoA

C5278

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

C5279

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

C5265

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

C5266

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

C5308

(3S)-hydroxyadipyl-CoA

C5310

3-hydroxyisovaleryl-CoA

C5272

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

C5274

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

C5315

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

C5285

(E)-2-methylcrotonoyl-CoA

C5123

2-trans,6-cis-tridecadienoyl-CoA

C5143

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

C5128

2-trans, 4-trans-undecadienoyl-CoA

C5127

(3R)-hydroxy, 4-trans-undecenoyl-CoA

C5137

(3E)-undec-2-enoyl-CoA

C5135

(3R)-hydroxy-undecanoyl-CoA

C5125

2-trans-nonenoyl-CoA

C5133

(3R)-hydroxy-nonanoyl-CoA

C5117

2-trans-6-trans-tridecadienoyl-CoA

C5144

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

C5182

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

C5186

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

C4907

oxalyl-CoA

C4933

formyl-CoA

C5282

itaconyl-CoA

C4913

malonyl-CoA

C4901

succinyl-CoA

C5298

acetyl-CoA

C4937

3'-dephospho-CoA

C1337

crotonyl-CoA

C4309

(2E)-dec-2-enoyl-CoA

C4299

(2E)-oct-2-enoyl-CoA

C7343

(S)-malyl-CoA

C5635

oleoyl-CoA

C10758

3-oxoadipyl-CoA

C10774

(3R)-3-hydroxybutanoyl-CoA

C10775

(S)-3-hydroxybutanoyl-CoA

C6059

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

C7353

(S)-3-hydroxydecanoyl-CoA

C15307

(S)-3-hydroxyoctanoyl-CoA

C1177

propanoyl-CoA

C11197

(S)-3-hydroxy-isobutanoyl-CoA

C3727

all-trans-retinyl palmitate

C2598

D-glucono-1,5-lactone

C10874

apo-4'-lycopenal

C10862

15-cis-phytoene

C10864

all-trans-phytoene

C8321

geranyl diphosphate

C9075

mono-trans,octa-cis-decaprenyl diphosphate

C9304

trans,octacis-decaprenyl phosphate

C4221

(3S)-2,3-epoxy-2,3-dihydrosqualene

C4420

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

C5904

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

C3117

dioleoyl phosphatidate

C6241

1-oleoyl-sn-glycerol 3-phosphate

C1810

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

C1813

di-trans,octa-cis-undecaprenyl diphosphate

C5378

geranylgeranyl diphosphate

C15301

all-trans-nonaprenyl diphosphate

C5383

all-trans-octaprenyl diphosphate

C5368

all-trans-hexaprenyl diphosphate

C5382

all-trans-heptaprenyl diphosphate

C5364

all-trans-decaprenyl diphosphate

C8322

di-trans,octa-cis-undecaprenyl phosphate

C4545

3-nonaprenyl-4-hydroxybenzoate

C7060

3-hexaprenyl-4-hydroxybenzoate

C4549

3-heptaprenyl-4-hydroxybenzoate

C4550

3-decaprenyl-4-hydroxybenzoate

C4553

3-octaprenyl-4-hydroxybenzoate

C7139

4-tyrosol

C6934

4-hydroxybenzoate

C6908

salicyl-6-hydroxy-2-cyclohexene-on-oyl

C7033

6-hydroxy-2-cyclohexen-one-carboxylate

C8490

3-methoxy-4-hydroxyphenylglycol

C8413

indole

C7694

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

C12836

phenol

C13088

chloramphenicol 3-acetate

C13114

1-chloro-2,4-dinitrobenzene

C4658

2,4-dinitrophenyl-S-glutathione

C15044

reduced riboflavin

C1659

6,7-dimethyl-8-(1-D-ribityl)lumazine

C12708

7,8-dihydroneopterin 3'-phosphate

C12668

molybdopterin adenine dinucleotide

C12702

cyclic pyranopterin phosphate

C12678

7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate

C12680

(7,8-dihydropterin-6-yl)methyl diphosphate

C12664

7,8-dihydroneopterin

C12696

7,8-dihydromonapterin

C12728

6-(hydroxymethyl)-7,8-dihydropterin

C12730

7,8-dihydroneopterin 3'-triphosphate

C10609

7,8-dihydropteroate

C9454

adenine

C7813

2'-deoxyadenosine

C7848

2'-deoxyguanosine

C15094

xanthosine

C15085

guanosine

C15091

inosine

C15088

adenosine

C7840

dGMP

C7743

dAMP

C7749

dITP

C7783

dATP

C7751

dGTP

C7747

dIDP

C7807

dGDP

C7823

dADP

C7759

ITP

C7745

GTP

C7844

ATP

C7817

IDP

C7795

GDP

C7757

ADP

C7741

IMP

C7811

XMP

C7827

GMP

C7809

AMP

C1705

sirohydrochlorin

C2305

precorrin-1

C2311

precorrin-2

C8764

dTTP

C7801

5,6-dihydrothymine

C4012

5,6-dihydrouracil

C8770

dUMP

C8744

dTMP

C8720

dTDP

C8739

uracil

C8752

dUDP

C8732

CDP

C8755

dCMP

C8733

dCDP

C8714

UDP

C8724

dUTP

C8760

UTP

C8772

dCTP

C8761

CTP

C2702

cytidine

C2706

uridine

C10601

thymine

C2245

CMP

C2241

UMP

C9540

preQ1

C10267

pppGpp

C10266

ppGpp

C10288

adenylo-succinate

C5552

5'-deoxyadenosine

C5489

1-(5-phospho-β-D-ribosyl)-AMP

C5485

1-(5-phospho-β-D-ribosyl)-ATP

C1804

P1,P4-bis(5'-adenosyl) tetraphosphate

C4243

β-nicotinamide D-ribonucleotide

C1817

cyclic di-3',5'-guanylate