an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

pyruvic oxime

dehydroascorbate (bicyclic form)

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

2,3-dioxo-L-gulonate

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

2-carboxy-L-xylonolactone

2-carboxy-L-threo-pentonate

H₂O

CO₂

S-adenosyl 3-(methylsulfanyl)propylamine

(S)-dihydroorotate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

glycerone phosphate

phosphoenolpyruvate

oxaloacetate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

3-keto-β-D-galactose

glycolate

4'-phosphopantetheine

aminoacetone

3-methyl-2-oxobutanoate

(S)-3-methyl-2-oxopentanoate

(R)-2,3-dihydroxy-3-methylpentanoate

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

(2S)-2-isopropylmalate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

carbamoyl phosphate

orotidine 5'-phosphate

(indol-3 yl)acetyl-CoA

(indol-3-yl)pyruvate

succinate semialdehyde

4-aminobutanoate

3-oxopropanoate

urea

L-canavanine

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

thiamine phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

S-methyl-5-thio-α-D-ribose 1-phosphate

S-methyl-5'-thioadenosine

5-deoxy-α-ribose 1-phosphate

prenyl diphosphate

isopentenyl diphosphate

H₂

2-dehydropantoate

hydroxypyruvate

2-phosphoglycolate

(R)-4'-phosphopantothenoyl-L-cysteine

(R)-4'-phosphopantothenate

(R)-5-phosphomevalonate

(R)-mevalonate

pseudouridine 5'-phosphate

anthranilate

N-(5-phosphoribosyl)-anthranilate

5-enolpyruvoyl-shikimate 3-phosphate

shikimate 3-phosphate

shikimate

3-dehydroshikimate

3-dehydroquinate

3-deoxy-D-arabino-heptulosonate 7-phosphate

N-acetyl-L-glutamate 5-semialdehyde

N-acetylglutamyl-phosphate

2-oxovalerate

3-ethylmalate

4-methyl-2-oxopentanoate

(2S)-2-isopropyl-3-oxosuccinate

thiamine diphosphate

ethanolamine

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

nicotinate adenine dinucleotide

hydrogen peroxide

quinolinate

β-nicotinate D-ribonucleotide

hexulose 6-phosphate

itaconate

(L-threonylcarbamoyl)adenylate

(4Z)-2-oxohept-4-enedioate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

dihydromethanophenazine

methanophenazine

CDP-glycerol

2-phenylethanol

2-methylbutanal

2-methylbutanol

3-methylbutanal

3-methylbutanol

isobutanol

indole-3-glycol aldehyde

indole-3-glycol

3-methoxy-4-hydroxyphenylglycolaldehyde

5-hydroxyindole acetaldehyde

5-hydroxytryptophol

3'-phosphoadenylyl-sulfate

2-arylpropanoate

2-aryl-2-methylmalonate

α-D-glucosamine 1-phosphate

hydroxylamine

pyrazine-2-carboxylate

4-amino-4-deoxychorismate

methylamine

(lipoyl)adenylate

N-ethylammeline

deethylsimazine

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate

α-ribazole 5'-phosphate

α-ribazole

carbon monoxide

(R)-mevalonate diphosphate

3-(O-geranylgeranyl)-sn-glycerol 1-phosphate

(R)-1-amino-2-propanol O-2-phosphate

dialurate

5,6-dimethylbenzimidazole

5-amino-6-(D-ribitylamino)uracil

1-deoxy-L-glycero-tetrulose 4-phosphate

5-amino-6-(5-phospho-D-ribitylamino)uracil

2,5-diamino-6-(5-phospho-D-ribitylamino)pyrimidin-4(3H)-one

N⁵-carboxyaminoimidazole ribonucleotide

ammonia

3-phosphooxypyruvate

4-amino-2-methyl-5-pyrimidinemethanol

L-arginino-succinate

autoinducer 2

S-ribosyl-L-homocysteine

L-gulono-1,4-lactone

L-xylo-hex-3-ulono-1,4-lactone

α-D-galacturonate 1-phosphate

L-dehydro-ascorbate

FMN

FMNH₂

FAD

demethylmenaquinol-8

menaquinol-8

NADP⁺

NAD⁺

NADPH

NADH

(R)-NADHX

(S)-NADHX

D-glucono-1,5-lactone

L-galactono-1,4-lactone

acetyl-CoA

3'-dephospho-CoA

2-methylacetoacetyl-CoA

isobutanoyl-CoA

succinyl-CoA

itaconyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

malonyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

oleoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

propanoyl-CoA

(S)-methylmalonyl-CoA

(R)-methylmalonyl-CoA

nicotinamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

pyrazinamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

(S)-2-chloropropanoate

2-chloroacetate

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

tyramine

agmatine

spermidine

dehydrospermidine

putrescine

trimethyl sulfonium

sulfate

selenate

hydrogencarbonate

phosphate

diphosphate

triphosphate

chloride

H⁺

ammonium

S-(hydroxymethyl)glutathione

3-(methylsulfanyl)propanal

methionol

dimethyl sulfide

glutathione

(R)-S-lactoylglutathione

3-sulfopyruvate

L-cysteate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

monodehydroascorbate radical

5,10-methenyltetrahydrofolate mono-L-glutamate

1-oleoyl-2-lyso-glycerone phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

2-O-(α-D-mannosyl)-D-glycerate

2-O-(α-D-mannosyl)-3-phospho-D-glycerate

3-phospho-D-glyceroyl-phosphate

(R)-glycerate

2-phospho-D-glycerate

3-phospho-D-glycerate

sn-glycerol 1-phosphate

sn-glycerol 3-phosphate

hydrogen sulfide

oxygen

cob(I)alamin

adenosylcobalamin

adenosylcobinamide

cob(I)inamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

adenosylcobalamin 5'-phosphate

adenosylcobinamide-GDP

cob(II)yrinate a,c-diamide

adenosyl-cobinamide phosphate

adenosylcobyrate

ethylphosphate

L-homocysteine

N-acetyl-L-glutaminyl-L-glutamine amide

N-acetyl-L-glutaminyl-L-glutamine

2-iminosuccinate

L-2-amino-3-oxobutanoate

L-aspartyl-4-phosphate

L-selenomethionine

seleno-L-homocysteine

N-carbamoyl-L-aspartate

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-acetyl-L-glutamate

sarcosine

3-phospho-L-serine

D-cysteine

D-aspartate

L-tryptophan

L-phenylalanine

L-tyrosine

L-cysteine

glycine

L-glutamine

L-threonine

L-serine

L-asparagine

L-glutamate

L-aspartate

L-arginine

L-alanine

L-leucine

β-alanine

L-valine

L-methionine

L-ornithine

L-cystathionine

L-citrulline

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

L-canaline

O-phospho-L-homoserine

L-homoserine

L-aspartate 4-semialdehyde

O-succinyl-L-homoserine

ADP

ATP

AMP

XMP

IMP

GDP

GTP

IDP

ITP

dADP

dGDP

adenylo-succinate

dATP

dGTP

dITP

dIDP

5'-deoxyadenosine

GMP

cyclic-AMP

2'-deoxyguanosine

2'-deoxyadenosine

dGMP

dAMP

thymidine

2'-deoxycytidine

2'-deoxyuridine

adenosine

ADP-D-ribose

ADP ribose 1''-phosphate

ADP ribose 1'',2''-cyclic phosphate

GDP-α-D-mannose

CDP-4-dehydro-3,6-dideoxy-α-D-glucose

CDP-α-abequose

dTDP-4-dehydro-β-L-rhamnose

dTDP-α-D-glucose

dTDP-β-L-rhamnose

UDP-α-D-glucose

UDP-α-D-galactose

UDP-N-acetyl-α-D-mannosamine

UDP-α-D-glucuronate

UDP-α-D-galactofuranose

UDP-α-D-galacturonate

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-mannosaminuronate

adenine

uracil

thymine

UTP

CTP

dUTP

dCTP

dTTP

UMP

CMP

CDP

UDP

dCDP

dUDP

dTDP

dTMP

dUMP

dCMP

β-nicotinamide D-ribonucleotide

D-gluconate

L-gulonate

aldehydo-L-galactonate

XXXG xyloglucan oligosaccharide

maltotriose

sucrose

α-lactose

maltohexaose

maltoheptaose

maltopentaose

maltotetraose

XXLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XLLG xyloglucan oligosaccharide

aldehydo-D-galacturonate

3'-ketolactose

5-phospho-α-D-ribose 1-diphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-erythrose 4-phosphate

L-fuculose 1-phosphate

α-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

sucrose 6^F-phosphate

D-ribulose-1,5-bisphosphate

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

glycerol

β-D-fructofuranose

N-acetyl-α-D-mannosamine

D-glyceraldehyde

glycolaldehyde

α-D-ribofuranose

β-D-galactopyranose

β-D-glucopyranose

α-D-glucopyranose

geranylgeranyl diphosphate

unsaturated CDP-archaeol

saturated CDP-archaeol

2,3-bis-O-phytanyl-sn-glycerol 1-phosphate

2,3-bis-O-(geranylgeranyl)-sn-glycerol 1-phosphate

dioleoyl phosphatidate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-oleoyl-sn-glycerol 3-phosphate

myo-inositol

1D-myo-inositol 3-monophosphate

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylglycol

ethanol

phytol

propan-1-ol

butan-1-ol

methylglyoxal

phenylacetaldehyde

(4-hydroxyphenyl)acetaldehyde

phytenal

(S)-lactaldehyde

formaldehyde

isobutanal

1-propanal

acetaldehyde

butan-1-al

diacetyl

acetate

orotate

(R)-pantoate

aldehydo-D-glucuronate

oleate

pyruvate

formate

propanoate

(R)-lactate

chorismate

fumarate

succinate

(S)-malate

glyoxylate

2-oxobutanoate

2-oxoglutarate

3-phenyl-2-oxopropanoate

4-aminobenzoate

4-tyrosol

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

3-methoxy-4-hydroxyphenylglycol

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydroneopterin 2',3'-cyclic phosphate

7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydroneopterin

7,8-dihydroneopterin 3'-phosphate

7,8-dihydroneopterin 2'-phosphate

7,8-dihydropteroate

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

riboflavin

6,7-dimethyl-8-(1-D-ribityl)lumazine

thiamine

nicotinate

L-ascorbate

pyridoxal 5'-phosphate

coenzyme A

(R)-lipoate