an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

acetoacetate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N⁵-carboxyaminoimidazole ribonucleotide

citrate

isopentenyl diphosphate

2-hydroxy-5-(methylsulfanyl)-3-oxopent-1-enyl 1-phosphate

shikimate

(S)-dihydroorotate

mesaconate

histidinol

xanthine

H₂

5-oxo-L-proline

3-dehydroquinate

N-dimethylethanolamine phosphate

oxaloacetate

selenophosphate

3-deoxy-D-arabino-heptulosonate 7-phosphate

nicotinate adenine dinucleotide

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

O-phosphoethanolamine

H₂O

(R)-5-phosphomevalonate

N-methylethanolamine phosphate

(R)-pantothenate

N-succinyl-2-amino-6-ketopimelate

(S)-2-aceto-2-hydroxybutanoate

anthranilate

imidazole acetol-phosphate

N¹-(5-phospho-β-D-ribosyl)glycinamide

1,4-dihydroxy-2-naphthoate

butanoyl phosphate

urea

D-erythro-imidazole-glycerol-phosphate

pseudouridine 5'-phosphate

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

L-dehydro-ascorbate

orotidine 5'-phosphate

carbamoyl phosphate

ethanolamine

6-phospho D-glucono-1,5-lactone

CO₂

glutathione disulfide

N-acetylglutamyl-phosphate

1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

shikimate 3-phosphate

4'-phosphopantetheine

prenyl diphosphate

α-D-ribose 1,5-bisphosphate

4-amino-2-methyl-5-pyrimidinemethanol

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

N-carbamoylputrescine

(S)-5-amino-3-oxohexanoate

(S)-2,3,4,5-tetrahydrodipicolinate

hexulose 6-phosphate

CDP-N-methylethanolamine

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

L-β-lysine

ammonia

N-acetyl-L-glutamate 5-semialdehyde

(R)-mevalonate diphosphate

4-amino-4-deoxychorismate

L-arginino-succinate

hydroxypyruvate

2-iminoacetate

acetyl phosphate

(R)-4'-phosphopantothenate

S-adenosyl 3-(methylsulfanyl)propylamine

2-dehydro-3-deoxy-D-gluconate 6-phosphate

preuroporphyrinogen

(R)-2,3-dihydroxy-3-methylpentanoate

2-succinylbenzoate

(R)-4'-phosphopantothenoyl-L-cysteine

5-phospho-β-D-ribosylamine

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

α-D-glucosamine 1-phosphate

5-(methylsulfanyl)-α-D-ribose

3-dehydroshikimate

CDP-N-dimethylethanolamine

glycerone phosphate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

lipoamide

(S)-2,3-dihydrodipicolinate

S-methyl-5-thio-α-D-ribose 1-phosphate

(S)-3-methyl-2-oxopentanoate

isochorismate

D-gluconate 6-phosphate

propanoyl phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

hydrogen selenide

thiamine phosphate

5-(methylsulfanyl)-ribulose 1-phosphate

S-methyl-5'-thioadenosine

β-nicotinate D-ribonucleotide

1,4-dihydroxy-2-naphthoyl-CoA

dihydrolipoamide

histidinal

N-tetradecanoylglycyl-peptide

prephenate

3-sulfinopyruvate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

phosphoenolpyruvate

L-histidinol phosphate

hydrogen peroxide

5-aminolevulinate

arsenite

thiamine diphosphate

aminoacetone

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate

phosphocholine

N-succinyl-L,L-2,6-diaminopimelate

glycyl-peptide

(R)-1-aminopropan-2-ol

3-hydroxypropanoate

5-enolpyruvoyl-shikimate 3-phosphate

coproporphyrinogen III

3-oxopropanoate

(S)-4-amino-5-oxopentanoate

(3S,5S)-3,5-diaminohexanoate

quinolinate

N-(5-phosphoribosyl)-anthranilate

2-C-methyl-D-erythritol 4-phosphate

porphobilinogen

(R)-mevalonate

3-(all-trans-octaprenyl)benzene-1,2-diol

β-D-fructofuranose

glycerol

N-acetyl-β-D-mannosamine

N-acetyl-α-D-glucosamine 1-phosphate

α-D-galactopyranose

β-L-galactopyranose

α-D-glucopyranose

β-D-glucopyranose

glycolaldehyde

sucrose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

D-sedoheptulose 7-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-erythrose 4-phosphate

5-phospho-α-D-ribose 1-diphosphate

β-L-galactose 1-phosphate

α-D-mannose 1-phosphate

α-D-glucopyranose 1-phosphate

α-D-galactose 1-phosphate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

α-D-ribose-1-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

D-ribulose 5-phosphate

UDP-N-acetyl-α-D-glucosamine

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

GDP-4-dehydro-6-deoxy-β-L-galactose

GDP-β-L-gulose

GDP-α-D-mannose

GDP-4-dehydro-α-D-rhamnose

GDP-β-L-galactose

GDP-α-D-rhamnose

ADP-α-D-glucose

ADP-D-ribose

D-glyceraldehyde 3-phosphate

D-gluconate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

chorismate

succinate

fumarate

L-aspartate

(S)-malate

L-cystathionine

L-arginine

L-glutamine

L-lysine

L-leucine

L-glutamate

L-alanine

L-histidine

L-tyrosine

L-methionine

L-aspartyl-4-phosphate

L-serine

L-ornithine

L-asparagine

L,L-diaminopimelate

L-phenylalanine

L-tryptophan

L-isoleucine

L-cysteine

L-threonine

N-acetyl-L-ornithine

N-formyl-L-methionine

N-carbamoyl-L-aspartate

β-alanine

L-2-amino-3-oxobutanoate

(2S, 3S)-3-methylaspartate

N-acetyl-L-glutamate

L-citrulline

S-adenosyl-L-homocysteine

O-phospho-L-homoserine

L-homocysteine

O-succinyl-L-homoserine

L-homoserine

1-aminocyclopropane-1-carboxylate

3-sulfino-L-alanine

S-adenosyl-L-methionine

L-aspartate 4-semialdehyde

meso-diaminopimelate

glycine

(2R,3S)-2-methylisocitrate

(S)-lactate

(R)-glycerate

(R)-lactate

acetate

orotate

pyruvate

glyoxylate

2-oxobutanoate

2-oxoglutarate

4-(methylsulfanyl)-2-oxobutanoate

2,3-dihydroxybenzoate

4-aminobenzoate

octanoate

butanoate

propanoate

formate

cis-2-methylaconitate

cis-aconitate

(2S,3S)-2-methylcitrate

D-threo-isocitrate

(S)-3-aminobutanoyl-CoA

succinyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

3'-dephospho-CoA

3-hydroxypropanoyl-CoA

acryloyl-CoA

malonyl-CoA

acetyl-CoA

(E)-glutaconyl-CoA

glutaryl-CoA

octanoyl-CoA

butanoyl-CoA

propanoyl-CoA

myristoyl-CoA

acetoacetyl-CoA

(3R)-3-hydroxybutanoyl-CoA

crotonyl-CoA

(S)-malyl-CoA

L-galactono-1,4-lactone

oxygen

nicotinamide

L-ascorbate

nicotinate

thiamine

7,8-dihydrofolate monoglutamate

tetrahydrofolate-L-glutamate

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

pyridoxine

pyridoxamine

pyridoxamine 5'-phosphate

pyridoxal 5'-phosphate

pyridoxal

pyridoxine 5'-phosphate

(2E,6E)-farnesyl diphosphate

sulfite

hydrogencarbonate

phosphate

triphosphate

diphosphate

H⁺

Fe²⁺

Ca²⁺

methylglyoxal

ubiquinone-8

1-octanal

formaldehyde

acetaldehyde

geranyl diphosphate

enterobactin

protoheme

ethene

glutathione

(R)-S-lactoylglutathione

5-(2-hydroxyethyl)-4-methylthiazole

4-methyl-5-(2-phosphooxyethyl)thiazole

agmatine

aminopropylcadaverine

cadaverine

spermidine

putrescine

spermine

choline

hydrogen cyanide

2-octaprenylphenol

2-iminosuccinate

4-methylphenol

AMP

XMP

GTP

ATP

hypoxanthine

dADP

dGMP

1-(5-phospho-β-D-ribosyl)-AMP

GMP

IMP

1-(5-phospho-β-D-ribosyl)-ATP

dGTP

GDP

dATP

dGDP

cyclic-GMP

ADP

adenylo-succinate

5'-deoxyadenosine

cytidine

uridine

inosine

adenosine

xanthosine

guanosine

2'-deoxyuridine

2'-deoxycytidine

thymidine

NADP⁺

NAD⁺

NADPH

NADH

adenine

guanine

uracil

cytosine

CDP-ethanolamine

CDP-choline

CMP

UMP

dTMP

dUMP

CDP

UDP

UTP

CTP

β-nicotinamide D-ribonucleotide

dUTP

dTTP

dCTP

dCDP

dTDP

dUDP

myo-inositol

phytate

D-myo-inositol (3,4)-bisphosphate

D-myo-inositol 1,3,4,5,6-pentakisphosphate

D-myo-inositol (3,4,6)-trisphosphate

D-myo-inositol (3,4,5,6)-tetrakisphosphate

1D-myo-inositol 3-monophosphate

1-octanol

ethanol

3-phospho-D-glyceroyl-phosphate

3-phospho-D-glycerate

2-phospho-D-glycerate

4-nitrophenol

4-nitrophenyl phosphate

protoporphyrinogen IX

protoporphyrin IX

uroporphyrinogen-III

sn-glycerol 3-phosphate

all-trans-octaprenyl diphosphate

3-octaprenyl-4-hydroxybenzoate

N-acetyl-D-mannosamine 6-phosphate

4-hydroxybenzoate

urate

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

demethylmenaquinol-8

3-demethylubiquinol-8

ubiquinol-8

menaquinol-8

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

2-methoxy-6-(all-trans-octaprenyl)phenol

5,10-methenyltetrahydrofolate mono-L-glutamate

(S)-citramalate

FAD

FADH₂

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydroneopterin 3'-phosphate

7,8-dihydroneopterin

7,8-dihydroneopterin 3'-triphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydropteroate

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

coenzyme A

L-cysteinylglycine

γ-L-glutamyl-L-cysteine