an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

H₂O

α-D-glucosamine 1-phosphate

hydrogen peroxide

CO₂

3'-phosphoadenylyl-sulfate

adenosine 5'-phosphosulfate

6-phospho D-glucono-1,5-lactone

oxaloacetate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

3-hydroxypropanoate

thiamine phosphate

salicyl alcohol

methylsalicylate

orotidine 5'-phosphate

N-acetylglutamyl-phosphate

4'-phosphopantetheine

(R)-4'-phosphopantothenoyl-L-cysteine

(R)-4'-phosphopantothenate

(S)-6-hydroxynicotine

4-imidazoleacetate

imidazole acetaldehyde

5-hydroxyindole acetate

5-hydroxyindole acetaldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

3,4-dihydroxyphenylacetaldehyde

propynoate

prop-2-ynal

D-glucurono-6,3-lactone

4-acetamidobutanoate

4-acetamidobutanal

dimethylsulfoniopropanoate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

(R)-2-methylimino-1-phenylpropan-1-ol

(-)-ephedrine

xanthine

sanguinarine

dihydrosanguinarine

macarpine

dihydromacarpine

dihydrochelirubine

L-arginino-succinate

L-canavanine

canavaninosuccinate

preuroporphyrinogen

porphobilinogen

4-aminobutanoate

4-methylaminobutanoate

5-aminolevulinate

3-phosphooxypyruvate

phosphoenolpyruvate

imidazole acetol-phosphate

D-erythro-imidazole-glycerol-phosphate

(S)-2-amino-6-oxohexanoate

4-hydroxy-2-nonenal

thiamine diphosphate

2-(α-hydroxyethyl)thiamine diphosphate

dethiobiotin

8-amino-7-oxononanoate

pimeloyl-CoA

7,8-diaminopelargonate

N-acetyl-L-glutamate 5-semialdehyde

5-dehydro-D-fructose

1-pyrroline-2-carboxylate

urocanate

4-imidazolone-5-propanoate

formamide

(S)-dihydroorotate

carbamoyl phosphate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

(R)-6-hydroxynicotine

glycerone phosphate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

prenyl diphosphate

nicotinate adenine dinucleotide

1-piperideine 6-carboxylate

L-pipecolate

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

3-dehydroshikimate

3-dehydroquinate

isopentenyl diphosphate

γ-L-glutamyl 5-phosphate

β-nicotinate D-ribonucleotide

(S)-4-amino-5-oxopentanoate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

pseudouridine 5'-phosphate

(R)-pantothenate

2-dehydropantoate

3-methyl-2-oxobutanoate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

(R)-2,3-dihydroxy-3-methylpentanoate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

4-maleyl-acetoacetate

homogentisate

acetoacetate

4-fumaryl-acetoacetate

4-methyl-2-oxopentanoate

2-keto-D-gluconate

indole-3-ethanol

adenosine 5'-phosphoselenate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

D-gluconate 6-phosphate

(2S)-2-isopropylmalate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

2-amino-2-deoxy-D-gluconate 6-phosphate

dihydroxyacetone

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

N-acetyl-D-muramate 6-phosphate

4-methylumbelliferyl glucoside

4-hydroxybenzaldehyde

scopolin

cis-coumarinic acid-β-D-glucoside

ethanolamine

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2,3-didehydroadipyl-CoA

N-succinyl-L,L-2,6-diaminopimelate

2-C-methyl-D-erythritol 4-phosphate

lipid A disaccharide (E. coli)

lipid X

3-deoxy-D-manno-octulosonate 8-phosphate

5-hydroxytryptophol

indole-3-glycol aldehyde

indole-3-glycol

isobutanol

3-methylbutanal

3-methylbutanol

2-methylbutanal

2-methylbutanol

2-phenylethanol

S-formylglutathione

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

chloramphenicol

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

urea-1-carboxylate

O-acetyl-L-serine

hydrogen selenide

3-phosphonopyruvate

urea

enol-phenylpyruvate

N-succinyl-2-amino-6-ketopimelate

N²-succinyl-L-arginine

N²-succinyl-L-ornithine

1-piperideine-2-carboxylate

dibenzo[1,4]dioxin-2,3-dione

(S)-3-methyl-2-oxopentanoate

3-hydroxy-3-methylglutarate

citrate

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

1,6-anhydro-N-acetyl-β-muramate

2-maleylacetate

carbonic acid

cyanate

L-xylo-hex-3-ulono-1,4-lactone

L-gulono-1,4-lactone

2,5-didehydro-D-gluconate

3-ureidopropanoate

shikimate

3-deoxy-D-arabino-heptulosonate 7-phosphate

cis,cis-muconate

muconolactone

(+)-muconolactone

(4,5-dihydro-5-oxofuran-2-yl)-acetate

4-methyl-3-oxoadipate-enol-lactone

3-methylmuconolactone

5-carboxymethyl-2-hydroxymuconate

2-hydroxy-5-carboxymethylmuconate semialdehyde

(4Z)-2-oxohept-4-enedioate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(2-hydroxyphenyl)acetate

5-methylcytosine

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

hydroxypyruvate

2-aminoacetaldehyde

2,5-dioxopentanoate

5-dehydro-4-deoxy-D-glucarate

4-methylsalicylate

5-methylsalicylate

3-carboxy-2-hydroxymuconate semialdehyde

histamine

(2,3-dihydroxybenzoyl)adenylate

(L-aspartyl)adenylate

isochorismate

hydrogenobyrinate a,c-diamide

(E)-3-(methoxycarbonyl)pent-2-enedioate

tryptamine

glutathione disulfide

oxalosuccinate

isoquinolin-2(1H)-one

isoquinoline

4-guanidinobutanoate

4-guanidinobutyramide

acrylate

acrylamide

(indol-3-yl)acetamide

propionamide

6-hydroxymelatonin

2-hydroxy-3-oxosuccinate

L-tartrate

meso-tartrate

4-amino-4-deoxychorismate

adenosine 3',5'-bisphosphate

N-(5-phosphoribosyl)-anthranilate

tartronate semialdehyde

2-oxovalerate

3-ethylmalate

(2S)-2-isopropyl-3-oxosuccinate

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

3-deoxy-α-D-manno-2-octulosonate

lipid IV_A

5-enolpyruvoyl-shikimate 3-phosphate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

prephenate

shikimate 3-phosphate

4-phosphooxy-L-threonine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

5-(methylsulfanyl)-ribulose 1-phosphate

S-methyl-5-thio-α-D-ribose 1-phosphate

3-demethylubiquinol-6

glycolate

2-phosphoglycolate

α-ribazole

α-ribazole 5'-phosphate

5,6-dimethylbenzimidazole

(R)-1-amino-2-propanol O-2-phosphate

O-ureido-L-homoserine

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

4-methyl-3-oxoadipate

(E)-glutaconate

histidinol

histidinal

L-histidinol phosphate

selenophosphate

quinolinate

acetyl phosphate

3-oxopropanoate

ethylamine

N-isopropylammelide

hydroxyatrazine

5-amino-6-(D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

anthranilate

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

coproporphyrinogen III

coniferaldehyde

N-carbamoylputrescine

succinate semialdehyde

N²-succinylglutamate

N²-succinyl-L-glutamate 5-semialdehyde

vanillin

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

carbon monoxide

hydroxylamine

ammonia

N6'-acetylkanamycin-B

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

(E)-2-benzylidenesuccinyl-CoA

DNA without lesion

N-ethylsuccinimide

N-ethylmaleimide

3-[(4-amino-6-chloro-1,3,5-triazin-2-yl)amino]benzenesulfonate

2,2'-disulfonyl azobenzene

phthalate

(4S)-4-hydroxy-2-oxoheptanedioate

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

methylamine

norspermidine

carboxynorspermidine

5-methoxyindoleacetaldehyde

5-methoxytryptamine

trans-O-hydroxybenzylidenepyruvate

β-D-ribosylnicotinate

glutathionylspermidine

(5R)-5-benzyl-hydantoin

(5S)-5-benzyl-hydantoin

N-ethylammeline

deethylsimazine

1-deoxy-L-glycero-tetrulose 4-phosphate

2-iminoacetate

dopamine 3-O-sulfate

N-acetyl-serotonin sulfate

6-sulfatoxymelatonin

5-hydroxytryptophol sulfate

serotonin O-sulfate

crotonate

cyclohex-1,5-diene-1-carbonyl-CoA

6-hydroxycyclohex-1-ene-1-carbonyl-CoA

6-oxocyclohex-1-ene-1-carbonyl-CoA

3-hydroxypimeloyl-CoA

3-oxopimeloyl-CoA

cyclohexane-1-carboxylate

cyclohexane-1-carbonyl-CoA

2-hydroxy-6-oxocyclohexane-1-carbonyl-CoA

N-ethylammelide

H₂

octopamine

(4-hydroxyphenyl)acetate

(R)-synephrine

2-dehydro-3-deoxy-D-gluconate

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

(S)-ureidoglycolate

butanoyl phosphate

pyruvic oxime

2-oxopent-4-enoate

(3E)-2-oxopent-3-enoate

(2E)-2-hydroxypenta-2,4-dienoate

(2Z,4E)-2-hydroxy-6-oxohexa-2,4-dienoate

3'-ketosucrose

4-amino-2-methyl-5-pyrimidinemethanol

isopropylamine

5-oxo-L-proline

2-amino-3-carboxymuconate-6-semialdehyde

N⁵-carboxyaminoimidazole ribonucleotide

hydrogenobyrinate

protoanemonin

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

oxamate

N-carbamoyl-2-oxoglycine

glutathioselenol

selenodiglutathione

(4S,5S)-4,5-dihydroxy-2,6-dioxohexanoate

autoinducer 2

S-ribosyl-L-homocysteine

pseudouridine

1,5-anhydro-D-fructose

α-D-galacturonate 1-phosphate

(enterobacterial common antigen)-undecaprenyl diphosphate

N-acetyl-β-D-mannosaminuronyl-(1→4)-N-acetyl-α-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol

4-oxoglutaramate

1-pyrroline

4-oxalocrotonate

bisorganyltrisulfane

5-hydroxyindole thiazolidine carboxylate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

L-dehydro-ascorbate

cyclic-2,3-O-oxalyl-L-threonate

dehydroascorbate (bicyclic form)

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

cyclic- 3,4-O-oxalyl-L-threonate

2,3-dioxo-L-gulonate

2-carboxy-L-xylonolactone

2-carboxy-L-threo-pentonate

(2E,6E)-farnesol

(2E,6E)-farnesyl diphosphate

pristanate

2-iminobutanoate

2-iminopropanoate

2-iminosuccinate

4-[(2Z)-2-(methylimino)ethyl]phenol

4-(2-iminoethyl)phenol

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysine

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-cysteinylglycine

N-acetyl-L-glutaminyl-L-glutamine amide

N-acetyl-L-glutaminyl-L-glutamine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

hypoglycin B

carbamate

L-proline

L-alanine

glycine

L-leucine

L-tryptophan

L-isoleucine

L-valine

L-selenocysteine

L-phenylalanine

L-methionine

L-cysteine

L-glutamate

L-glutamine

L-asparagine

L-aspartate

L-lysine

L-arginine

L,L-diaminopimelate

L-serine

L-ornithine

L-threonine

L-histidine

L-cystathionine

L-tyrosine

L-aspartyl-4-phosphate

L-2,4-diaminobutanoate

L-isoglutamine

N-carbamoyl-L-aspartate

N⁶-acetyl-N⁶-hydroxy-L-lysine

N-formyl-L-glutamate

formyl-L-isoglutamine

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-formimino-L-glutamate

N⁶-methyl-L-lysine

N-methyl-L-tryptophan

L-citrulline

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

L-homocysteine

L-glutamate-5-semialdehyde

L-aspartate 4-semialdehyde

L-homoserine

O-phospho-L-homoserine

O-succinyl-L-homoserine

S-sulfo-L-cysteine

L-canaline

L-dopa

1-aminocyclopropane-1-carboxylate

hypoglycin A

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

L-saccharopine

D-nopaline

alanopine

L-selenomethionine

seleno-L-homocysteine

O-acetyl-L-homoserine

5-hydroxy-L-tryptophan

N⁶-hydroxy-L-lysine

D-octopine

D-lysopine

N-carbamoylglycine

N-acetyl-L-glutamate

N-acetyl-L-methionine

sarcosine

N,N-dimethylglycine

L-threonine 3-O-phosphate

3-phospho-L-serine

D-alanine

D-glutamate

D-proline

β-alanine

(S)-3-amino-2-methylpropanoate

(R)-3-amino-2-methylpropanoate

3,5,3'-triiodo-L-thyronine

ADP

ATP

AMP

GDP

GTP

ppGpp

pppGpp

GMP

XMP

cyclic-AMP

5'-deoxyadenosine

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

adenylo-succinate

IMP

2'-deoxyguanosine

dGTP

hypoxanthine

dADP

dATP

dGDP

dAMP

dGMP

ITP

IDP

dITP

dIDP

2'-deoxyinosine

2'-deoxyadenosine

isoguanine

8-oxo-dGTP

8-oxo-GTP

5,6-dihydrouracil

5,6-dihydrothymine

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

ADP-α-D-glucose

GDP-α-D-mannose

GDP-α-D-mannuronate

GDP-α-D-glucose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-α-D-glucose

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

dTDP-4-acetamido-4,6-dideoxy-α-D-galactose

UDP-α-D-glucuronate

UDP-α-D-glucose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-β-L-iduronate

UDP-N-acetyl-α-D-mannosamine

UDP-α-D-galactose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-α-D-galactofuranose

UDP-α-D-galacturonate

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

adenine

guanine

uracil

thymine

cytosine

preQ₁

cyclic di-3',5'-guanylate

dUMP

dTMP

dCMP

dTDP

dCDP

dUDP

dUTP

dTTP

dCTP

CDP

UDP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

reduced β-nicotinamide D-ribonucleotide

UTP

CTP

CMP

UMP

5-hydroxy-CMP

5-hydroxy-CTP

2-hydroxy-dATP

NAD⁺

NADP⁺

NADH

NADPH

2'-deoxyuridine

2'-deoxycytidine

thymidine

adenosine

xanthosine

guanosine

inosine

uridine

cytidine

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

5-fluorouracil

5-fluorocytosine

D-gluconate

L-gulonate

aldehydo-L-galactonate

1-(β-D ribofuranosyl)nicotinamide

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

3-dehydro-D-glucopyranose

kanamycin B

lotaustralin

taxiphyllin

linamarin

linustatin

neolinustatin

5-phospho-α-D-ribose 1-diphosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

4-phospho-D-erythronate

α-D-galactose 1-phosphate

α-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

α-D-galactose 6-phosphate

β-D-galactose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

sucrose 6^F-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (E. faeciums)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (mycobacteria)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

4-deoxy-L-threo-hex-4-enopyranuronate

β-D-fructofuranose

1,5-anhydro-D-mannitol

keto-D-fructose

keto-D-sorbose

keto-L-sorbose

keto-D-psicose

glycolaldehyde

aldehydo-D-ribose

β-D-ribopyranose

α-D-ribofuranose

β-D-ribofuranose

α-D-galactopyranose

β-D-galactopyranose

β-D-glucopyranose

α-D-glucopyranose

D-glyceraldehyde

L-glyceraldehyde

D-xylulose

L-xylulose

2-dehydro-D-glucopyranose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-glucosamine

glycerol

D-Iditol

D-altritol

D-mannitol

galactitol

xylitol

D-arabinitol

β-D-cellobiose

maltotriose

sucrose

α,α-trehalose

maltotetraose

maltopentaose

maltohexaose

maltoheptaose

aldehydo-D-galacturonate

salicylaldehyde

4-methylumbelliferone

scopoletin

coumarin

all-trans-retinol

all-trans-retinyl palmitate

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

geranyl diphosphate

apo-4'-lycopenal

β-zeacarotene

β-carotene

myxol

plectaniaxanthin

zeaxanthin

β-cryptoxanthin

hydroxy-β-zeacarotene

apo-4'-lycopenoate

aerobactin

N¹-citryl-N⁶-acetyl-N⁶-hydroxy-L-lysine

chelirubine

betanidin quinone

betanidin

vanillylamine

miraxanthin V

betalamate

4-cis-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

4-trans-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

2-trans-nonenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3E)-dec-3-enoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3E)-tetradec-3-enoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E)-undec-3-enoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

all-trans-octaprenyl diphosphate

3-octaprenyl-4-hydroxybenzoate

1-oleoyl-2-palmitoyl-phosphatidylglycerol

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

dioleoyl phosphatidate

1-oleoyl-2-lyso-glycerone phosphate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-oleoyl-sn-glycerol 3-phosphate

1,2-dibutyrin

tributyrin

myo-inositol

scyllo-inosose

1D-myo-inositol 3-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 2-monophosphate

3,5-cyclohexadiene-1,2-diol-1-carboxylate

3,4-dihydroxymandelate

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylacetate

protocatechuate

3,4-dihydroxyphenylglycol

catechol

4-methylcatechol

4-chlorocatechol

2,3-dihydroxybenzoate

dopamine

(R)-adrenaline

(R)-noradrenaline

ethylene glycol

(R,R)-2,3-butanediol

ethanol

propan-1-ol

phytol

butan-1-ol

methanol

3-acetamidopropanal

(2E,6E)-farnesal

3-(N-morpholino)propanal

methylglyoxal

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

benzaldehyde

phytenal

(S)-lactaldehyde

1-octanal

acetaldehyde

formaldehyde

1-propanal

isobutanal

butan-1-al

(R)-acetoin

menadione

caldariellaquinone

Reactive Blue 5

diacetyl

6-hydroxypseudooxynicotine

a coenzyme-A group

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

pyruvate

2-oxoglutarate

2-oxobutanoate

glyoxylate

4-(methylsulfanyl)-2-oxobutanoate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

salicylate

4-aminobenzoate

benzoate

acetate

orotate

(R)-pantoate

allantoate

aldehydo-D-glucuronate

(S)-1-pyrroline-5-carboxylate

palmitate

octanoate

stearate

myristate

laurate

decanoate

arachidate

butanoate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

α-linolenate

oleate

linoleate

γ-linolenate

(3E,5Z)-tetradecadienoate

di-homo-γ-linolenate

phytenate

(15Z)-tetracosenoate

(2E,6E)-farnesoate

leukotriene-E4

leukotriene-D4

3-oxoadipate

formate

propanoate

(S)-lactate

(R)-lactate

(2R,3S)-2-methylisocitrate

(R)-glycerate

(R)-2-hydroxyglutarate

(S)-2-hydroxyglutarate

(R)-3-hydroxybutanoate

3-carboxy-cis,cis-muconate

cis-aconitate

trans-aconitate

cis-2-methylaconitate

(2S,3S)-2-methylcitrate

D-threo-isocitrate

3-(carbamoylamino)-2-methylpropanoate

chorismate

(3E)-2-oxohex-3-enedioate

D-glucarate

D-galactarate

fumarate

succinate

(S)-malate

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

4-tyrosol

4-hydroxybenzoate

urate

cyanuric acid

coumarinate

ferulate

6,7-dehydrobaicalein

baicalein

4-chlorosalicylate

5-chlorosalicylate

triiodothyronine sulfate

thyroxine sulfate

L-thyroxine

2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

tyramine

2-phenylethylamine

serotonin

N-acetyl-serotonin

4-methylphenol

menadiol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

caldariellaquinol

3-demethylubiquinol-9

3-demethylubiquinol-8

3-demethylubiquinol-7

3-demethylubiquinol-10

demethylmenaquinol-8

menaquinol-8

ubiquinol-9

ubiquinol-8

ubiquinol-6

ubiquinol-7

ubiquinol-10

(indol-3-yl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

vanillyl mandelate

3-methoxy-4-hydroxyphenylglycol

metanephrine

normetanephrine

atrazine

hydrogen cyanide

(indole-3-yl)acetonitrile

preQ₀

acrylonitrile

(2R)-2-hydroxy-2-methylbutanenitrile

2-hydroxy-2-methylpropanenitrile

2-hydroxychromene-2-carboxylate

7,8-dihydrolumazine

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydropterin

7,8-dihydroneopterin

7,8-dihydromonapterin

7,8-dihydroneopterin 2',3'-cyclic phosphate

7,8-dihydroneopterin 3'-phosphate

7,8-dihydropteroate

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

FAD

FMN

riboflavin

FADH₂

FMNH₂

reduced riboflavin

6,7-dimethyl-8-(1-D-ribityl)lumazine

hydantoin

cob(I)alamin

adenosylcobalamin

sirohydrochlorin

cobyrinate

precorrin-6A

precorrin-6B

precorrin-8x

precorrin-7

precorrin-3A

precorrin-2

precorrin-4

precorrin-3B

precorrin-5

precorrin-1

cobalt-precorrin-5A

cobalt-precorrin-4

cobalt-precorrin-6A

cobalt-precorrin-5B

cobalt-precorrin-6B

cobalt-precorrin-8

cobalt-precorrin-7

cobalt-precorrin-3

thiamine

L-ascorbate

nicotinate

nicotinamide

pyridoxine 5'-phosphate

pyridoxine

pyridoxamine 5'-phosphate

pyridoxamine

pyridoxal 5'-phosphate

pyridoxal

coenzyme A

(R)-NADHX

(S)-NADHX

glycine betaine

D-glucono-1,5-lactone

cis-dienelactone

trans-dienelactone

L-galactono-1,4-lactone

acetyl-CoA

malonyl-CoA

succinyl-CoA

3-hydroxypropanoyl-CoA

dihomo γ-linolenoyl-CoA

3'-dephospho-CoA

2-methylacetoacetyl-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

(3S)-hydroxyadipyl-CoA

(E)-2-methylcrotonoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-hydroxyisovaleryl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

2-methylbutanoyl-CoA

isobutanoyl-CoA

isovaleryl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

(+)-7-epi-jasmonoyl-CoA

4-hydroxybenzoyl-CoA

3-methylglutaconyl-CoA

3-methylcrotonyl-CoA

phenylacetyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(E)-glutaconyl-CoA

(R)-2-hydroxyglutaryl-CoA

(2E,5Z)-tetradecenoyl-CoA

glutaryl-CoA

acryloyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

3-oxoadipyl-CoA

3-oxo-myristoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxodecanoyl-CoA

3-oxohexanoyl-CoA

3-oxooctanoyl-CoA

3-oxododecanoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

hexadecanedioyl-CoA

palmitoyl-CoA

stearoyl-CoA

myristoyl-CoA

icosanoyl-CoA

pristanoyl-CoA

lauroyl-CoA

decanoyl-CoA

octanoyl-CoA

hexanoyl-CoA

butanoyl-CoA

propanoyl-CoA

(Z)-15-tetracosenoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

(S)-malyl-CoA

phytenoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dodec-2-enoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(2E)-octadec-2-enoyl-CoA

crotonyl-CoA

ethene

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

phenylacetate

(+)-7-epi-jasmonate

cholest-4-en-3-one

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

(25S)-3-oxocholest-4-en-26-oyl-CoA

3-oxocholest-4,24-dien-26-oyl-CoA

3-oxochol-4-en-24-oyl-CoA

3-oxochol-4,22-dien-24-oyl-CoA

22-hydroxy-3-oxochol-4-en-24-oyl-CoA

3-oxo-4,17-pregnadiene-20-carboxyl-CoA

17-hydroxy-3-oxo-4-pregnane-20-carboxyl-CoA

(25S)-26-hydroxycholest-4-en-3-one

(25S)-3-oxocholest-4-en-26-oate

(25S)-26-oxocholest-4-en-3-one

cholest-5-en-3-one

cholesterol

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

(S)-(+)-allantoin

acetamide

3-chloro-cis,cis-muconate

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

sn-glycero-3-phosphocholine

betaine aldehyde hydrate

choline sulfate

choline

betaine aldehyde

agmatine

putrescine

spermidine

cadaverine

N¹-acetylspermidine

N¹-acetylspermine

N-acetylputrescine

4-aminobutanal

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

4-[(E)-2-(methylamino)ethenyl]phenol

4-[(Z)-2-aminoethenyl]phenol

N¹,N¹²-diacetylspermine

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

selenide

thiosulfate

OH^-

nitrite

nitrate

hydrogensulfite

hydrogencarbonate

molybdate

superoxide

phosphonate

phosphate

diphosphate

triphosphate

chloride

Fe³⁺

Fe²⁺

Cu²⁺

Co²⁺

Cd²⁺

Mg²⁺

ammonium

K⁺

H⁺

S-(hydroxymethyl)glutathione

3-dimethylsulfoniopropionaldehyde

3-(methylsulfanyl)propanal

methionol

dimethyl sulfide

glutathione

(R)-S-lactoylglutathione

taurine

3-sulfopyruvate

L-cysteate

1-butanesulfonate

isethionate

3-(N-morpholino)propanesulfonate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

thiocyanate

methanethiol

S-sulfanylglutathione

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

chloramphenicol 3-acetate

nitric oxide

hydroxyl radical

monodehydroascorbate radical

2-methoxy-6-(all-trans-octaprenyl)phenol

2-octaprenylphenol

(S)-3-hydroxy-isobutanoate

5,10-methenyltetrahydrofolate mono-L-glutamate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

dTDP-4-amino-4,6-dideoxy-α-D-galactose

(S)-ureidoglycine

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

S⁰

oxygen

hydrogen sulfide

protochlorophyllide a

chlorophyllide a

3,8-divinyl protochlorophyllide a

uroporphyrinogen-III

Mg-protoporphyrin

protoporphyrin IX

coproporphyrinogen I

uroporphyrinogen-I

protoporphyrinogen IX

magnesium-protoporphyrin IX 13-monomethyl ester

siroheme

protoheme

(Z,Z)-biliverdin-IX α

N₂

adenosylcobinamide

cob(I)inamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

cob(II)yrinate a,c-diamide

adenosylcobalamin 5'-phosphate

adenosyl-cobinamide phosphate

adenosylcobinamide-GDP

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

cobalt-sirohydrochlorin

cobalt-factor III

cob(II)yrinate c-monoamide

carboxyphosphinopyruvate