an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

(4-hydroxyphenyl)acetate

glutathione disulfide

4-amino-2-methyl-5-pyrimidinemethanol

S-ribosyl-L-homocysteine

autoinducer 2

(R)-4-phosphopantoate

2-hydroxy-6-oxocyclohexane-1-carbonyl-CoA

cyclohexane-1-carbonyl-CoA

cyclohexane-1-carboxylate

3-oxopimeloyl-CoA

3-hydroxypimeloyl-CoA

6-oxocyclohex-1-ene-1-carbonyl-CoA

6-hydroxycyclohex-1-ene-1-carbonyl-CoA

cyclohex-1,5-diene-1-carbonyl-CoA

crotonate

3-(O-geranylgeranyl)-sn-glycerol 1-phosphate

(R)-mevalonate diphosphate

N⁵-carboxyaminoimidazole ribonucleotide

carbon monoxide

5,6-dimethylbenzimidazole

dialurate

(R)-1-amino-2-propanol O-2-phosphate

2-(α-hydroxyethyl)thiamine diphosphate

2,5-diamino-6-(5-phospho-D-ribitylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

1-deoxy-L-glycero-tetrulose 4-phosphate

oxalosuccinate

O-ureido-L-homoserine

hexulose 6-phosphate

3-keto-β-D-galactose

4-methylumbelliferyl glucoside

4-hydroxybenzaldehyde

scopolin

cis-coumarinic acid-β-D-glucoside

arsenite

(indol-3-yl)acetyl-L-alanine

(indol-3-yl)acetyl-L-leucine

5-hydroxytryptophol

5-hydroxyindole acetaldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

indole-3-glycol

indole-3-glycol aldehyde

isobutanol

3-methylbutanol

3-methylbutanal

2-methylbutanol

2-methylbutanal

2-phenylethanol

hydroxylamine

α-ribazole

α-ribazole 5'-phosphate

α-D-glucosamine 1-phosphate

(2S)-2-isopropyl-3-oxosuccinate

4-methyl-2-oxopentanoate

3-ethylmalate

2-oxovalerate

(S)-3-methyl-2-oxopentanoate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(4Z)-2-oxohept-4-enedioate

formamide

pyrazine-2-carboxylate

CDP-glycerol

pseudouridine 5'-phosphate

ammonia

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

urea-1-carboxylate

(lipoyl)adenylate

4-amino-4-deoxychorismate

deethylsimazine

N-ethylammeline

methylamine

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

hydrogen selenide

O-acetyl-L-serine

2-deoxygluconate

3-dehydro-2-deoxy-D-gluconate

coproporphyrinogen III

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

8-amino-7-oxononanoate

(S)-2-amino-6-oxohexanoate

7,8-diaminopelargonate

4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate

xanthine

urea

(4S,5S)-4,5-dihydroxy-2,6-dioxohexanoate

2-dehydro-3-deoxy-D-gluconate

ethanolamine

H₂

3-β-hydroxyandrost-5-en-17-one 3-sulfate

estrone 3-sulfate

5-amino-6-(D-ribitylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

nicotinate adenine dinucleotide

(S)-dihydroorotate

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

citrate

canavaninosuccinate

L-canavanine

L-arginino-succinate

3-phosphooxypyruvate

5-phospho-β-D-ribosylamine

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

(indol-3-yl)pyruvate

(indol-3 yl)acetyl-CoA

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-deoxy-α-ribose 1-phosphate

S-methyl-5'-thioadenosine

S-methyl-5-thio-α-D-ribose 1-phosphate

isopentenyl diphosphate

prenyl diphosphate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

aminoacetone

orotidine 5'-phosphate

3-methyl-2-oxobutanoate

oxaloacetate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

2-dehydropantoate

2-phosphoglycolate

glycolate

3-oxopropanoate

4-aminobutanoate

succinate semialdehyde

4'-phosphopantetheine

(R)-4'-phosphopantothenate

(R)-4'-phosphopantothenoyl-L-cysteine

(R)-mevalonate

(R)-5-phosphomevalonate

histidinal

histidinol

D-erythro-imidazole-glycerol-phosphate

imidazole acetol-phosphate

L-histidinol phosphate

(2S)-2-isopropylmalate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

3-deoxy-D-arabino-heptulosonate 7-phosphate

3-dehydroquinate

3-dehydroshikimate

shikimate

phosphoenolpyruvate

shikimate 3-phosphate

5-enolpyruvoyl-shikimate 3-phosphate

prephenate

N-(5-phosphoribosyl)-anthranilate

anthranilate

carbamoyl phosphate

thiamine phosphate

thiamine diphosphate

S-adenosyl 3-(methylsulfanyl)propylamine

glycerone phosphate

hydrogen peroxide

β-nicotinate D-ribonucleotide

quinolinate

H₂O

CO₂

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

enol-phenylpyruvate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

5-hydroxyindole thiazolidine carboxylate

pyruvic oxime

1-piperideine 6-carboxylate

(2E,6E)-farnesyl diphosphate

S-(hydroxymethyl)glutathione

dimethyl sulfide

methionol

3-(methylsulfanyl)propanal

glutathione

S-sulfanylglutathione

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

5-(2-hydroxyethyl)-4-methylthiazole

4-methyl-5-(2-phosphooxyethyl)thiazole

L-cysteate

3-sulfopyruvate

(R)-S-lactoylglutathione

trimethyl sulfonium

sulfate

selenate

thiosulfate

nitrite

hydrogencarbonate

molybdate

chloride

phosphate

diphosphate

triphosphate

Fe³⁺

ammonium

H⁺

Co²⁺

Cu²⁺

4-methylphenol

L-homocysteine

(2Z)-2-aminobut-2-enoate

agmatine

putrescine

dehydrospermidine

spermidine

tyramine

2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

sn-glycero-3-phosphoethanolamine

glycerophosphoglycerol

glycerophosphoserine

5-chloro-5-deoxy-D-ribonate

5-chloro-4-hydroxy-2-oxopentanoate

2-chloroacetate

pyrazinamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

nicotinamide

estrone

3-β-hydroxyandrost-5-en-17-one

(indol-3-yl)acetate

glutaryl-CoA

(E)-glutaconyl-CoA

malonyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

isobutanoyl-CoA

2-methylacetoacetyl-CoA

3'-dephospho-CoA

succinyl-CoA

acetyl-CoA

(S)-methylmalonyl-CoA

(R)-methylmalonyl-CoA

crotonyl-CoA

oleoyl-CoA

(S)-3-hydroxybutanoyl-CoA

propanoyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

D-glucono-1,5-lactone

FMNH₂

FMN

FAD

(S)-NADHX

(R)-NADHX

NADH

NADPH

NAD⁺

NADP⁺

menaquinol-8

demethylmenaquinol-8

(R)-lipoate

coenzyme A

5,10-methylene-tetrahydromethanopterin

tetrahydromethanopterin

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

nicotinate

riboflavin

pyridoxal 5'-phosphate

(S)-1-pyrroline-5-carboxylate

adenosylcobalamin

cob(I)alamin

6,7-dimethyl-8-(1-D-ribityl)lumazine

7,8-dihydroneopterin 2'-phosphate

7,8-dihydroneopterin 3'-phosphate

7,8-dihydroneopterin

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydroneopterin 2',3'-cyclic phosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate

7,8-dihydropteroate

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

guanine

adenine

2'-deoxyadenosine

2'-deoxyguanosine

xanthosine

adenosine

hypoxanthine

dAMP

dGMP

dITP

dGTP

dATP

dIDP

dGDP

dADP

IDP

GDP

ADP

IMP

XMP

GMP

AMP

ITP

GTP

ATP

dUMP

dCMP

UDP

dUDP

dTTP

dCDP

CDP

orotate

uracil

dTMP

dTDP

CTP

UTP

dCTP

dUTP

UDP-α-D-galactose

UDP-N-acetyl-α-D-mannosamine

UDP-α-D-glucose

UDP-N-acetyl-α-D-glucosamine

dTDP-α-D-glucose

2'-deoxyuridine

2'-deoxycytidine

thymidine

thymine

UMP

CMP

scopoletin

coumarin

4-methylumbelliferone

taxiphyllin

hydrogen cyanide

linustatin

neolinustatin

linamarin

lotaustralin

2-hydroxy-2-methylpropanenitrile

(2R)-2-hydroxy-2-methylbutanenitrile

4-tyrosol

3-methoxy-4-hydroxyphenylglycol

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

3,4-dihydroxyphenylglycol

3,4-dihydroxyphenylglycolaldehyde

coumarinate

4-aminobenzoate

L-cysteine

L-tyrosine

L-threonine

L-serine

L-glutamine

L-asparagine

glycine

L-lysine

L-arginine

L-histidine

L-glutamate

L-aspartate

L-phenylalanine

L-tryptophan

D-aspartate

D-cysteine

D-nopaline

L-2-amino-3-oxobutanoate

L-aspartyl-4-phosphate

seleno-L-homocysteine

L-selenomethionine

3-phospho-L-serine

sarcosine

N-acetyl-L-citrulline

N-acetyl-L-ornithine

N-acetyl-L-glutamate

N-carbamoyl-L-aspartate

L-citrulline

L-canaline

S-sulfo-L-cysteine

L-homoserine

L-aspartate 4-semialdehyde

L-ornithine

O-succinyl-L-homoserine

O-phospho-L-homoserine

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

L-glutamate-5-semialdehyde

L-selenocysteine

L-methionine

L-alanine

L-valine

L-leucine

L-proline

L-cystathionine

β-alanine

chorismate

maleate

succinate

fumarate

(S)-malate

cis-aconitate

D-threo-isocitrate

(R)-lactate

(R)-glycerate

pyruvate

acetate

formate

propanoate

oleate

leukotriene-D4

leukotriene-E4

(R)-pantoate

D-gluconate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

glyoxylate

2-oxobutanoate

2-oxoglutarate

diacetyl

glycolaldehyde

butan-1-al

acetaldehyde

1-propanal

isobutanal

formaldehyde

(S)-lactaldehyde

phytenal

L-glyceraldehyde

D-glyceraldehyde

α-D-glucopyranose

β-D-glucopyranose

aldehydo-D-mannose

β-D-mannopyranose

β-D-galactopyranose

α-D-galactopyranose

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

aldehydo-L-arabinose

butan-1-ol

propan-1-ol

ethanol

phytol

glycerol

L-arabinitol

D-mannitol

galactitol

myo-inositol

1D-myo-inositol 3-monophosphate

1-oleoyl-2-lyso-glycerone phosphate

1-oleoyl-sn-glycerol 3-phosphate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

dioleoyl phosphatidate

saturated CDP-archaeol

unsaturated CDP-archaeol

2,3-bis-O-phytanyl-sn-glycerol 1-phosphate

2,3-bis-O-(geranylgeranyl)-sn-glycerol 1-phosphate

geranylgeranyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

ferric-enterobactin complex

XXLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XLLG xyloglucan oligosaccharide

XXXG xyloglucan oligosaccharide

maltotriose

maltotetraose

maltopentaose

maltoheptaose

maltohexaose

allolactose

sucrose

α,α-trehalose

α-lactose

β-D-cellobiose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-α-D-mannosamine

β-D-fructofuranose

3'-ketolactose

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

D-ribulose-1,5-bisphosphate

sucrose 6^F-phosphate

GDP-α-D-mannose

ADP ribose 1'',2''-cyclic phosphate

ADP ribose 1''-phosphate

ADP-D-ribose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

5-phospho-α-D-ribose 1-diphosphate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

D-fructose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

D-xylulose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

L-fuculose 1-phosphate

α-D-galactose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

8-oxo-dGTP

8-oxo-dGMP

1-(5-phospho-β-D-ribosyl)-AMP

adenylo-succinate

5'-deoxyadenosine

1-(5-phospho-β-D-ribosyl)-ATP

β-nicotinamide D-ribonucleotide

N-acetyl-L-glutaminyl-L-glutamine

N-acetyl-L-glutaminyl-L-glutamine amide

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

2-iminobutanoate

2-iminosuccinate

ethylphosphate

adenosyl-cobinamide phosphate

cob(II)yrinate a,c-diamide

adenosylcobyrate

adenosylcobinamide-GDP

adenosylcobalamin 5'-phosphate

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)inamide

adenosylcobinamide

protoporphyrin IX

protoporphyrinogen IX

S⁰

hydrogen sulfide

oxygen

sn-glycerol 1-phosphate

sn-glycerol 3-phosphate

2-O-(α-D-mannosyl)-3-phospho-D-glycerate

2-O-(α-D-mannosyl)-D-glycerate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

(2R)-2,3-dihydroxy-3-methylbutanoate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

5,10-methenyltetrahydrofolate mono-L-glutamate

(S)-3-hydroxy-isobutanoate