an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

(S)-4-amino-5-oxopentanoate

α-D-glucosamine 1-phosphate

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

N-(2,3-dihydroxybenzoyl)-L-serine trimer

glutathione disulfide

3-dehydro-2-deoxy-D-gluconate

2-deoxygluconate

2-iminoacetate

1,4-dihydroxy-2-naphthoate

isochorismate

1,4-dihydroxy-2-naphthoyl-CoA

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

ADP-L-glycero-β-D-manno-heptose

selenophosphate

1,6-anhydro-N-acetyl-β-muramate

2-succinylbenzoate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

core oligosaccharide-lipid A (E. coli K-12 core type)

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

carbon monoxide

homogentisate

4-maleyl-acetoacetate

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

7-epicholate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

N²-succinyl-L-arginine

N²-succinyl-L-ornithine

mercuriphenyl acetate

(3S,5S)-3,5-diaminohexanoate

(S)-5-amino-3-oxohexanoate

hydrogen selenide

glutathioselenol

selenodiglutathione

N⁵-carboxyaminoimidazole ribonucleotide

2-amino-3-carboxymuconate-6-semialdehyde

4-amino-2-methyl-5-pyrimidinemethanol

5-oxo-L-proline

pseudouridine

ammonia

1-piperideine 6-carboxylate

4-oxoglutaramate

bisorganyltrisulfane

5-hydroxyindole thiazolidine carboxylate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

H₂O

3-methyl-2-oxobutanoate

preuroporphyrinogen

porphobilinogen

(R)-4'-phosphopantothenate

(R)-pantothenate

CO₂

thiamine diphosphate

2-(α-hydroxyethyl)thiamine diphosphate

urea-1-carboxylate

salicyl alcohol

methylsalicylate

orotidine 5'-phosphate

oxaloacetate

tartronate semialdehyde

(2S)-2-isopropylmalate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

acetyl phosphate

O-acetyl-L-serine

carbamoyl phosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

isopentenyl diphosphate

prenyl diphosphate

pseudouridine 5'-phosphate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

coproporphyrinogen III

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

glycerone phosphate

nicotinate adenine dinucleotide

ethanolamine

5-amino-6-(D-ribitylamino)uracil

3-dehydroshikimate

3-dehydroquinate

shikimate

urea

2-C-methyl-D-erythritol 4-phosphate

lipid A disaccharide (E. coli)

lipid X

γ-L-glutamyl 5-phosphate

D-gluconate 6-phosphate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

citrate

3-deoxy-α-D-manno-2-octulosonate

3-deoxy-D-manno-octulosonate 8-phosphate

phosphoenolpyruvate

succinate semialdehyde

6-phospho D-glucono-1,5-lactone

4-aminobutanoate

3-oxopropanoate

2-amino-2-deoxy-D-gluconate 6-phosphate

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

N-acetyl-D-muramate 6-phosphate

β-D-ribosylnicotinate

β-nicotinate D-ribonucleotide

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

(S)-3-methyl-2-oxopentanoate

4-methyl-2-oxopentanoate

4-imidazoleacetate

imidazole acetaldehyde

5-hydroxyindole acetate

5-hydroxyindole acetaldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

3,4-dihydroxyphenylacetaldehyde

propynoate

prop-2-ynal

D-glucurono-6,3-lactone

4-acetamidobutanoate

4-acetamidobutanal

dimethylsulfoniopropanoate

3-demethylubiquinol-6

hydrogen peroxide

hydroxypyruvate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

thiamine phosphate

(S)-dihydroorotate

2-dehydropantoate

(R)-2,3-dihydroxy-3-methylpentanoate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

3-keto-β-D-galactose

enol-phenylpyruvate

dethiobiotin

8-amino-7-oxononanoate

pimeloyl-CoA

7,8-diaminopelargonate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

aminoacetone

3-deoxy-D-arabino-heptulosonate 7-phosphate

6-deoxyerythronolide B

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

histidinol

histidinal

imidazole acetol-phosphate

D-erythro-imidazole-glycerol-phosphate

L-histidinol phosphate

carbonic acid

5-amino-6-(5-phospho-D-ribosylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribitylamino)uracil

glycolate

2-phosphoglycolate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

4'-phosphopantetheine

glutathionylspermidine

H₂

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

quinolinate

3-phosphooxypyruvate

4-phosphooxy-L-threonine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

anthranilate

N-(5-phosphoribosyl)-anthranilate

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

4-imidazolone-5-propanoate

formamide

urocanate

5-enolpyruvoyl-shikimate 3-phosphate

oxalosuccinate

5-(methylsulfanyl)-α-D-ribose

S-methyl-5'-thioadenosine

S-adenosyl 3-(methylsulfanyl)propylamine

lipid IV_A

3-mercaptopyruvate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

3'-phosphoadenylyl-sulfate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

cyanate

L-selenocystathionine

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2,3-didehydroadipyl-CoA

prephenate

α-D-galactosyl-diphosphoundecaprenol

ManNAc-GlcNAc-PP-undecaprenol

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

5-aminolevulinate

L-arginino-succinate

L-canavanine

canavaninosuccinate

O-ureido-L-homoserine

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

shikimate 3-phosphate

2-dehydro-3-deoxy-D-gluconate

(R)-4'-phosphopantothenoyl-L-cysteine

hydrogenobyrinate a,c-diamide

hydrogenobyrinate

4-hydroxy-2-nonenal

5-phospho-α-D-ribose 1,2-cyclic phosphate

α-D-ribose-1-methylphosphonate 5-phosphate

2-oxovalerate

3-ethylmalate

(2S)-2-isopropyl-3-oxosuccinate

malonate

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

2-phenylethanol

2-methylbutanal

2-methylbutanol

3-methylbutanal

3-methylbutanol

isobutanol

indole-3-glycol aldehyde

indole-3-glycol

5-hydroxytryptophol

autoinducer 2

S-ribosyl-L-homocysteine

ADP-D-glycero-β-D-manno-heptose

D-glycero-β-D-manno-heptose 1-phosphate

D-glycero-β-D-manno-heptose 1,7-bisphosphate

L-β-lysine

propionamide

(indol-3-yl)acetamide

4-guanidinobutanoate

4-guanidinobutyramide

acrylate

acrylamide

xanthine

nigerose

N²-succinylglutamate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

benzoylsuccinyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

pimelate

N-succinyl-L,L-2,6-diaminopimelate

norspermidine

carboxynorspermidine

(S)-2-amino-6-oxohexanoate

itaconate

N²-succinyl-L-glutamate 5-semialdehyde

DNA without lesion

pregn-5-ene-3,20-dione

pregn-5-ene-3,20-dione-17-ol

5-androstene-3,17-dione

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

4-amino-4-deoxychorismate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

2-maleylacetate

2-oleoylglycerol

L-quinate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

1-deoxy-L-glycero-tetrulose 4-phosphate

acetoacetate

4-fumaryl-acetoacetate

(E)-2-benzylidenesuccinyl-CoA

(L-threonylcarbamoyl)adenylate

N-succinyl-2-amino-6-ketopimelate

(S)-2,3,4,5-tetrahydrodipicolinate

(2E,6E)-farnesyl diphosphate

pristanate

hypoglycin B

L-α-amino-ε-keto-pimelate

carbamate

L-methionine

L-cysteine

glycine

L-alanine

L-valine

L-proline

L-isoleucine

L-leucine

L-phenylalanine

L-tryptophan

L-isoglutamine

L-glutamine

L-glutamate

L-aspartate

L-asparagine

L-aspartyl-4-phosphate

L,L-diaminopimelate

L-serine

L-ornithine

L-threonine

L-tyrosine

L-histidine

L-arginine

L-cystathionine

N^ω-hydroxy-L-arginine

L-lysine

N-carbamoyl-L-aspartate

N-formyl-L-glutamate

formyl-L-isoglutamine

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-formimino-L-glutamate

L-citrulline

L-canaline

L-4-hydroxyglutamate semialdehyde

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

L-homocysteine

L-aspartate 4-semialdehyde

L-glutamate-5-semialdehyde

hypoglycin A

O-phospho-L-homoserine

L-homoserine

O-succinyl-L-homoserine

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

L-selenomethionine

seleno-L-homocysteine

L-2-amino-3-oxobutanoate

L-saccharopine

O-acetyl-L-homoserine

trans-4-hydroxy-L-proline

N-acetyl-L-glutamate

N-acetyl-L-methionine

S-methyl-L-methionine

3-phospho-L-serine

D-alanine

D-glutamate

D-proline

D-aspartate

β-alanine

(R)-β-lysine

(S)-3-amino-2-methylpropanoate

guanosine 2',3'-cyclic monophosphate

adenosine 2',3'-cyclic monophosphate

adenosine 3'-monophosphate

guanosine 3'-monophosphate

dGMP

dAMP

isoguanine

8-oxo-dGTP

8-oxo-GTP

ADP

ATP

AMP

GDP

GMP

GTP

dATP

dADP

dGTP

dGDP

ITP

IDP

dITP

dIDP

5'-deoxyadenosine

adenylo-succinate

IMP

ppGpp

pppGpp

XMP

1-(5-phospho-β-D-ribosyl)-ATP

2'-deoxyinosine

2'-deoxyadenosine

cyclic-AMP

hypoxanthine

dIMP

XTP

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

2'-deoxyguanosine

1-(5-phospho-β-D-ribosyl)-AMP

CDP-4-dehydro-6-deoxy-α-D-glucose

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

ADP-α-D-glucose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-glucose

GDP-α-D-mannose

CDP-α-D-glucose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-β-L-mycarose

dTDP-D-desosamine

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

dTDP-α-D-glucose

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-α-D-galactofuranose

UDP-α-D-galactose

UDP-α-D-glucose

UDP-N-acetyl-α-D-mannosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

adenine

guanine

uracil

thymine

preQ₁

cyclic di-3',5'-guanylate

uridine 2'3'-cyclic monophosphate

cytidine 2',3'-cyclic monophosphate

dCMP

dTMP

dUMP

dCDP

dTDP

dUDP

dCTP

dTTP

dUTP

CDP

UDP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

reduced β-nicotinamide D-ribonucleotide

CTP

UTP

UMP

CMP

2-hydroxy-dATP

5-hydroxy-CTP

NAD⁺

NADP⁺

NADH

NADPH

cytidine-3'-monophosphate

uridine 3'-monophosphate

2'-deoxycytidine

2'-deoxyuridine

thymidine

adenosine

xanthosine

inosine

guanosine

uridine

cytidine

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

5'-deoxy-5'-fluoroadenosine

D-altronate

D-gluconate

D-mannonate

1-(β-D ribofuranosyl)nicotinamide

3'-ketolactose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

5-phospho-α-D-ribose 1-diphosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

4-phospho-D-erythronate

α-D-galactose 1-phosphate

α-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

α-D-galactose 6-phosphate

β-D-galactose 6-phosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-ribose-1-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

2-deoxy-α-D-ribose 1-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

sucrose 6^G-phosphate

sucrose 6^F-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

D-ribulose-1,5-bisphosphate

a peptidoglycan dimer (mycobacteria)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (E. faecium, tetrapeptide)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

β-D-fructofuranose

keto-D-fructose

glycolaldehyde

aldehydo-D-ribose

β-D-ribopyranose

β-D-ribofuranose

α-D-ribofuranose

β-D-galactopyranose

α-D-galactopyranose

β-D-glucopyranose

α-D-glucopyranose

D-glyceraldehyde

D-xylulose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-glucosamine

glycerol

D-mannitol 1-phosphate

XXXG xyloglucan oligosaccharide

maltotriose

(heptosyl)₂-Kdo₂-lipid A

heptosyl-Kdo₂-lipid A

α-Kdo-(2→6)-lipid IV_A

4-O-phospho-α-Kdo-(2→6)-lipid IV_A

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

glucosyl-(heptosyl)₂-Kdo₂-lipid A

glucosyl-(heptosyl)₂-Kdo₂-lipid A-phosphate

glucosyl-(heptosyl)₃-Kdo₂-lipid A-phosphate

glucosyl-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

galactosyl-glucosyl-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

galactosyl-(glucosyl)₂-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

galactosyl-(glucosyl)₃-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A

sucrose

α-lactose

maltotetraose

maltopentaose

maltohexaose

maltoheptaose

XXLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XLLG xyloglucan oligosaccharide

aldehydo-D-galacturonate

salicylaldehyde

all-trans-retinol

all-trans-retinyl palmitate

3-oxo-24-ethyl-cholest-4-ene

3-oxo-24-ethyl-26-hydroxy-cholest-4-ene

3-oxo-24-ethyl-cholest-4-en-26-oyl-CoA

3-oxo-24-ethyl-cholest-4,24-dien-26-oyl-CoA

3-oxo-24-(isopropanoyl)-cholest-4,24-dien-26-oyl-CoA

3,24-dioxo-cholest-4-en-26-oate

3-oxo-24-ethyl-cholest-4-en-26-oate

3-oxo-24-ethyl-26-al-cholest-4-ene

3-oxo-24-ethyl-cholest-5-ene

sitosterol

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

geranyl diphosphate

apo-4'-lycopenal

apo-4'-lycopenoate

erythromycin D

3-α-mycarosylerythronolide B

ferric-[N-(2,3-dihydroxybenzoyl)-L-serine trimer] complex

erythronolide B

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

4-cis-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

4-trans-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

2-trans-nonenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3E)-dec-3-enoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

(3E)-undec-2-enoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-nonaprenyl diphosphate

3-decaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-hexaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenol

dioleoyl phosphatidate

1-palmitoyl-2-linoleoyl-phosphatidylcholine

1-oleoyl-2-lyso-glycerone phosphate

1-linoleoyl-sn-glycero-3-phosphocholine

1-oleoyl-sn-glycerol 3-phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

myo-inositol

1D-myo-inositol 3-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 2-monophosphate

3,4-dihydroxymandelate

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylacetate

3,4-dihydroxyphenylglycol

butan-1-ol

ethanol

phytol

propan-1-ol

methanol

fluoroacetaldehyde

(2E,6E)-farnesal

methylglyoxal

benzaldehyde

phenylacetaldehyde

(4-hydroxyphenyl)acetaldehyde

phytenal

(S)-lactaldehyde

butan-1-al

acetaldehyde

1-octanal

formaldehyde

isobutanal

1-propanal

menadione

caldariellaquinone

diacetyl

2',4,4',6'-tetrahydroxychalcone

a coenzyme-A group

pyruvate

2-oxobutanoate

2-oxoglutarate

4-(methylsulfanyl)-2-oxobutanoate

glyoxylate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

salicylate

4-aminobenzoate

benzoate

acetate

fluoroacetate

orotate

(R)-pantoate

D-tagaturonate

(S)-1-pyrroline-5-carboxylate

butanoate

palmitate

octanoate

stearate

myristate

laurate

decanoate

arachidate

(3E,5Z)-tetradecadienoate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

linoleate

oleate

α-linolenate

di-homo-γ-linolenate

phytenate

(15Z)-tetracosenoate

(2E,6E)-farnesoate

formate

propanoate

(R)-lactate

(S)-lactate

(2R,3S)-2-methylisocitrate

(R)-glycerate

(R)-2-hydroxybutanoate

(S)-2-hydroxyglutarate

cis-aconitate

(2S,3S)-2-methylcitrate

cis-2-methylaconitate

D-threo-isocitrate

chorismate

D-glucarate

succinate

fumarate

maleate

(S)-malate

urate

benzene

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

4-tyrosol

4-hydroxybenzoate

2-[(1R,6S)-1,6-dihydroxycyclohexa-2,4-dien-1-yl]acetyl-coA

2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

4-methylphenol

menadiol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

caldariellaquinol

3-demethylubiquinol-9

3-demethylubiquinol-8

3-demethylubiquinol-7

3-demethylubiquinol-10

demethylmenaquinol-8

menaquinol-8

ubiquinol-9

ubiquinol-8

ubiquinol-6

ubiquinol-7

ubiquinol-10

(indol-3-yl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

vanillyl mandelate

3-methoxy-4-hydroxyphenylglycol

acrylonitrile

hydrogen cyanide

preQ₀

(indole-3-yl)acetonitrile

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydromonapterin

7,8-dihydroneopterin

7,8-dihydroneopterin 3'-phosphate

molybdopterin adenine dinucleotide

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

molybdopterin

cyclic pyranopterin phosphate

7,8-dihydroneopterin 2',3'-cyclic phosphate

MoO₂-molybdopterin cofactor

7,8-dihydropteroate

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

FAD

riboflavin

FMN

FADH₂

reduced riboflavin

FMNH₂

6,7-dimethyl-8-(1-D-ribityl)lumazine

cob(I)alamin

adenosylcobalamin

cobyrinate

sirohydrochlorin

cobalt-precorrin-5A

cobalt-precorrin-4

cobalt-precorrin-6A

cobalt-precorrin-5B

cobalt-precorrin-6B

cobalt-precorrin-8

cobalt-precorrin-7

cobalt-precorrin-3

precorrin-1

precorrin-2

thiamine

nicotinate

nicotinamide

pyridoxamine

pyridoxal

pyridoxine

pyridoxal 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxine 5'-phosphate

coenzyme A

(R)-NADHX

(S)-NADHX

glycine betaine

D-glucono-1,5-lactone

trans-dienelactone

cis-dienelactone

isobutanoyl-CoA

(S)-3-aminobutanoyl-CoA

2-methylbutanoyl-CoA

acetyl-CoA

succinyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

(+)-7-epi-jasmonoyl-CoA

4-hydroxybenzoyl-CoA

2-methylacetoacetyl-CoA

malonyl-CoA

dihomo γ-linolenoyl-CoA

3'-dephospho-CoA

phenylacetyl-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

(3S)-hydroxyadipyl-CoA

(E)-2-methylcrotonoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-hydroxyisovaleryl-CoA

itaconyl-CoA

(2E,5Z)-tetradecenoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

3-oxoadipyl-CoA

3-oxo-myristoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-palmitoyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

3-oxododecanoyl-CoA

3-oxooctanoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

hexadecanedioyl-CoA

icosanoyl-CoA

stearoyl-CoA

palmitoyl-CoA

myristoyl-CoA

pristanoyl-CoA

octanoyl-CoA

lauroyl-CoA

decanoyl-CoA

hexanoyl-CoA

butanoyl-CoA

propanoyl-CoA

(Z)-15-tetracosenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

phytenoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-octadec-2-enoyl-CoA

crotonyl-CoA

(S)-methylmalonyl-CoA

androsterone

pregnenolone

testosterone

progesterone

campest-4-en-3-one

ethene

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

phenylacetate

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

3α,7α,12β-trihydroxy-5β-cholan-24-oate

(25S)-3-oxocholest-4-en-26-oyl-CoA

3-oxocholest-4,24-dien-26-oyl-CoA

3-oxochol-4-en-24-oyl-CoA

3-oxochol-4,22-dien-24-oyl-CoA

22-hydroxy-3-oxochol-4-en-24-oyl-CoA

3-oxo-4,17-pregnadiene-20-carboxyl-CoA

17-hydroxy-3-oxo-4-pregnane-20-carboxyl-CoA

(25S)-3-oxocholest-4-en-26-oate

(25S)-26-oxocholest-4-en-3-one

(25S)-26-hydroxycholest-4-en-3-one

cholest-4-en-3-one

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

17-α-hydroxypregnenolone

cholest-5-en-3-one

cholesterol

3-β-hydroxyandrost-5-en-17-one

glycocholate

cholate

isocholate

3-dehydrocholate

campest-4-en-3β-ol

5α-androstane-3,17-dione

androsta-1,4-diene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

androst-4-ene-3,17-dione

methane

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

acetamide

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

choline

betaine aldehyde

betaine aldehyde hydrate

agmatine

putrescine

spermidine

2-aminoprop-2-enoate

2-iminopropanoate

(2Z)-2-aminobut-2-enoate

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

selenide

thiosulfate

OH^-

nitrite

nitrate

hydrogensulfite

hydrogencarbonate

molybdate

superoxide

phosphate

diphosphate

triphosphate

chloride

Fe³⁺

Cu⁺

Na⁺

H⁺

ammonium

Cu²⁺

Hg²⁺

Fe²⁺

Co²⁺

Mg²⁺

S-(hydroxymethyl)glutathione

dimethyl sulfide

3-dimethylsulfoniopropionaldehyde

3-(methylsulfanyl)propanal

methionol

glutathione

(R)-S-lactoylglutathione

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

thiocyanate

methanethiol

S-sulfanylglutathione

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

hydroxyl radical

nitric oxide

2-methoxy-6-(all-trans-octaprenyl)phenol

2-octaprenylphenol

(S)-3-hydroxy-isobutanoate

5,10-methenyltetrahydrofolate mono-L-glutamate

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

3-phospho-D-glyceroyl-phosphate

2-O-(α-D-mannosyl)-D-glycerate

2-O-(α-D-mannosyl)-3-phospho-D-glycerate

2,3-diphospho-D-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

S⁰

hydrogen sulfide

oxygen

Hg⁰

protochlorophyllide a

chlorophyllide a

3,8-divinyl protochlorophyllide a

Mg-protoporphyrin

magnesium-protoporphyrin IX 13-monomethyl ester

coproporphyrinogen I

uroporphyrinogen-I

uroporphyrinogen-III

protoporphyrin IX

protoporphyrinogen IX

siroheme

protoheme

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

cobalt-sirohydrochlorin

cobalt-factor III

adenosylcobinamide

cob(I)inamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

cob(II)yrinate a,c-diamide

cob(II)yrinate c-monoamide

phosphonoacetaldehyde

(2-aminoethyl)phosphonate

ethylphosphate

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal

2-iminosuccinate

2-iminobutanoate

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-cysteinylglycine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

hippurate