ID Name References
C1

an oxidized electron donor

C2

a reduced electron donor

C3

a deaminated amino group acceptor

C4

an aminated amino group acceptor

C5

Charged-LEU-tRNAs

C6

LEU-tRNAs

C7

a 2-oxo acid

C8

an amino acid

C9

an acyl-CoA

C10

a carboxylate

C11

an oxidized ferredoxin [iron-sulfur] cluster

C12

a reduced ferredoxin [iron-sulfur] cluster

C13

NAD(P)H

C14

NAD(P)+

C15

an L-tyrosyl-[tRNAtyr]

C16

a tRNAtyr

C17

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

C18

4α,14α-dimethyl-porifersta-8,25(27)-dienol

C24

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

C26

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

C27

isoshowacene

C29

2-hydroxyhexadecanal

C30

16-sinapoyloxypalmitate

C31

3-methylquinolin-2-ol

C32

(22R)-hydroxycholesterol

C37

N-(2-methylpropyl)hydroxylamine

C38

chloroeremomycin

C39

3-hydroxy-3-methylbutanoate

C40

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C41

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C42

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C43

rhamnosyl tetracyclic spinosyn pseudoaglycone

C44

rhamnosyl tricyclic spinosyn pseudoaglycone

C45

spinosyn tricyclic macrolactone

C46

11-dehydro-15-oxo spinosyn macrolactone

C47

15-oxo spinosyn macrolactone

C48

spinosyn macrolactone

C51

diethylamine N-oxide

C52

triethylamine N-oxide

C53

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

C55

nitroxyl

C57

trans,octacis-decaprenylphospho-β-D-arabinofuranose

C58

1,3-dihydro-2H-imidazol-2-one

C63

2-phenylethyl β-D-glucopyranoside

C64

formyl hopane

C65

ribosyl hopane

C66

adenosyl hopane

C70

(2Z)-2-hydroxypenta-2,4-dienoate

C72

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

C73

(2Z)-2,4-dihydroxypent-2-enoate

C75

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

C76

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

C77

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

C79

(+)-3'-hydroxylarreatricin

C80

(+)-larreatricin

C81

2-trans,4-trans-xanthoxin

C1431

3-dehydroshikimate

C6614

O-ureido-L-homoserine

C932

canavaninosuccinate

C12056

L-arginino-succinate

C11543

H2O

C11800

(R)-pantothenate

C12054

L-dehydro-ascorbate

C13983

α-D-galacturonate 1-phosphate

C14156

L-xylo-hex-3-ulono-1,4-lactone

C12046

L-gulono-1,4-lactone

C13986

pseudouridine

C12326

1-deoxy-L-glycero-tetrulose 4-phosphate

C12848

N5-carboxyaminoimidazole ribonucleotide

C4690

selenodiglutathione

C4688

glutathioselenol

C1550

2-amino-3-carboxymuconate-6-semialdehyde

C6099

lipid IVA

C3343

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

C15156

dialurate

C6361

acetoacetate

C13284

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

C12315

5,6-dimethylbenzimidazole

C11982

methylamine

C689

N-ethylglycine

C12256

ethylamine

C3307

6-amino-2-oxohexanoate

C14181

2-maleylacetate

C571

4-hydroxy-2-nonenal

C14921

β-L-arabinose 1-phosphate

C12325

1,4-dihydroxy-2-naphthoate

C4883

2-oleoylglycerol

C13638

N2-succinyl-L-glutamate 5-semialdehyde

C11869

N2-succinylglutamate

C14179

4-acetamidobutanal

C14137

4-acetamidobutanoate

C142

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

C2263

4-prenylphlorisobutyrophenone

C11648

3-(O-geranylgeranyl)-sn-glycerol 1-phosphate

C1108

acetyl phosphate

C12409

creatinine

C12016

(lipoyl)adenylate

C12494

N-acetyl-D-muramate 6-phosphate

C3482

dihydroxyacetone

C3821

5-methylcytosine

C13950

pimeloyl-CoA

C12368

(S)-2,3,4,5-tetrahydrodipicolinate

C13716

4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate

C352

2-iminoacetate

C191

L-selenocystathionine

C13627

DNA without lesion

C933

L-canavanine

C1265

4-phosphooxy-L-threonine

C1548

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

C1631

3-amino-1-hydroxyacetone 1-phosphate

C13843

cyanate

C13225

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

C12492

1,6-anhydro-N-acetyl-β-muramate

C14005

prephytoene diphosphate

C11794

3'-phosphoadenylyl-sulfate

C11932

N-acetyl-D-galactosamine 6-phosphate

C15282

D-galactosamine-6-phosphate

C11838

2-succinylbenzoate

C12044

L-histidinol phosphate

C11715

quinolinate

C1503

2-dehydro-3-deoxy-D-gluconate 6-phosphate

C996

adenosine 5'-phosphosulfate

C192

adenosine 5'-phosphoselenate

C1268

(R)-4'-phosphopantothenate

C11710

(R)-4'-phosphopantothenoyl-L-cysteine

C13417

2-isopropylmaleate

C1038

α-ribazole

C1036

α-ribazole 5'-phosphate

C12390

D-erythro-imidazole-glycerol-phosphate

C12125

imidazole acetol-phosphate

C15238

5-deoxy-α-ribose 1-phosphate

C14053

S-methyl-5-thio-α-D-ribose 1-phosphate

C11654

selenophosphate

C13854

hydrogen selenide

C160

2-carboxy-L-threo-pentonate

C159

2-carboxy-L-xylonolactone

C435

bisorganyltrisulfane

C14153

2,3-dioxo-L-gulonate

C162

cyclic- 3,4-O-oxalyl-L-threonate

C1010

ammonia

C163

dehydroascorbate (bicyclic form)

C158

cyclic-2,3-O-oxalyl-L-threonate

C12367

1-piperideine-2-carboxylate

C1223

5-aminopentanoate

C1231

5-aminolevulinate

C11767

porphobilinogen

C12139

preuroporphyrinogen

C12164

H2

C4674

glutathione disulfide

C12352

(S)-dihydroorotate

C12096

isochorismate

C13283

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

C13824

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

C13281

1,4-dihydroxy-2-naphthoyl-CoA

C12218

α-D-glucosamine 1-phosphate

C11652

shikimate 3-phosphate

C1427

5-enolpyruvoyl-shikimate 3-phosphate

C1540

2-(β-D-glucosyl)-sn-glycerol 3-phosphate

C1541

2-O-(β-D-glucopyranosyl)-glycerol

C12158

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

C1449

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

C12369

3-dehydroquinate

C12214

(S)-4-amino-5-oxopentanoate

C3656

D-gluconate 6-phosphate

C1530

(2R,3S)-3-isopropylmalate

C13786

(2S)-2-isopropyl-3-oxosuccinate

C506

3-ethylmalate

C3259

2-oxovalerate

C12048

γ-L-glutamyl 5-phosphate

C11634

tartronate semialdehyde

C11946

N-(5-phosphoribosyl)-anthranilate

C11930

N-acetylglutamyl-phosphate

C1182

N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide

C11802

4'-phosphopantetheine

C3319

4-methyl-2-oxopentanoate

C3417

(S)-3-methyl-2-oxopentanoate

C10349

glycerone phosphate

C12408

crepenynate

C12394

6-phospho D-glucono-1,5-lactone

C13851

hydrogenobyrinate

C13850

hydrogenobyrinate a,c-diamide

C12364

isopentenyl diphosphate

C1438

(2S)-2-isopropylmalate

C1538

2-C-methyl-D-erythritol 4-phosphate

C2191

carbamoyl phosphate

C3829

5-amino-6-(5-phospho-D-ribitylamino)uracil

C12351

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

C10274

5-amino-6-(5-phospho-D-ribosylamino)uracil

C13635

β-D-ribosylnicotinate

C1018

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

C11606

thiamine phosphate

C1552

2-(α-hydroxyethyl)thiamine diphosphate

C11604

thiamine diphosphate

C14003

N-acetyl-L-glutamate 5-semialdehyde

C3262

3-methyl-2-oxobutanoate

C1528

2-dehydropantoate

C1621

(R)-2,3-dihydroxy-3-methylpentanoate

C6369

(S)-2-aceto-2-hydroxybutanoate

C6359

(S)-2-acetolactate

C11711

(R)-1-amino-2-propanol O-2-phosphate

C1633

(R)-1-aminopropan-2-ol

C2325

α-D-galactosyl-diphosphoundecaprenol

C11832

orotidine 5'-phosphate

C949

lipid X

C10794

lipid A disaccharide (E. coli)

C11774

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

C1184

5-phospho-β-D-ribosylamine

C1180

N1-(5-phospho-β-D-ribosyl)glycinamide

C11748

pseudouridine 5'-phosphate

C1353

3-phosphooxypyruvate

C11857

β-nicotinate D-ribonucleotide

C9422

nicotinate adenine dinucleotide

C11812

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

C12355

dethiobiotin

C1130

8-amino-7-oxononanoate

C3264

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

C12350

7,8-diaminopelargonate

C12178

histidinal

C12176

histidinol

C11760

prephenate

C12274

enol-phenylpyruvate

C13871

L-arogenate

C6444

oxaloacetate

C873

coproporphyrinogen III

C1171

2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine

C1172

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

C1572

15,16-dihydrobiliverdin

C927

carbon monoxide

C11826

oxalosuccinate

C12162

hydrogen peroxide

C14074

prenyl diphosphate

C1102

O-acetyl-L-serine

C3850

5-amino-6-(D-ribitylamino)uracil

C928

CO2

C11688

S-adenosyl 3-(methylsulfanyl)propylamine

C1196

S-methyl-5'-thioadenosine

C7865

urea

C1002

anthranilate

C11479

phosphoenolpyruvate

C1429

3-deoxy-D-arabino-heptulosonate 7-phosphate

C891

citrate

C11653

shikimate

C9077

(2E,6E)-farnesyl diphosphate

C2774

pristanate

C6043

4-methylphenol

C12247

L-homocysteine

C4632

(glutathion-S-yl)-4-hydroxy-2-nonenal

C10799

DNA with lesion

C5221

adenosylcobalamin

C9874

cob(I)alamin

C9811

cob(II)yrinate c-monoamide

C9837

cobalt-precorrin-7

C9866

cobalt-precorrin-8

C9842

cobalt-precorrin-6B

C9847

cobalt-precorrin-4

C9871

cobalt-precorrin-5A

C9861

cobyrinate

C9813

cobalt-precorrin-5B

C9818

cobalt-precorrin-6A

C9830

adenosylcobinamide-GDP

C1218

adenosylcobalamin 5'-phosphate

C9799

cobalt-precorrin-2

C9822

cobalt-precorrin-3

C9845

cobalt-sirohydrochlorin

C9821

cobalt-factor III

C9823

cob(I)yrinate a,c-diamide

C9869

cob(I)inamide

C9841

3,8-divinyl chlorophyllide a

C9836

protochlorophyllide a

C9850

chlorophyllide a

C2999

chlorophyll a

C9860

131-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

C9817

3,8-divinyl protochlorophyllide a

C9835

131-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

C9812

magnesium-protoporphyrin IX 13-monomethyl ester

C9828

cob(II)yrinate a,c-diamide

C9865

Mg-protoporphyrin

C9853

adenosyl-cob(III)yrinate a,c-diamide

C9855

adenosyl-cobinamide phosphate

C9800

adenosylcobyrate

C9807

adenosylcobinamide

C6624

protoheme

C2255

N2

C7662

uroporphyrinogen-I

C7672

coproporphyrinogen I

C7676

protoporphyrin IX

C7666

protoporphyrinogen IX

C7658

uroporphyrinogen-III

C6408

(Z,Z)-biliverdin-IX α

C3300

(2R,3Z)-phycocyanobilin

C3174

(3Z)-phycoerythrobilin

C7118

hydrogen sulfide

C7121

oxygen

C8420

sn-glycerol 1-phosphate

C8419

sn-glycerol 3-phosphate

C6427

2,3-diphospho-D-glycerate

C11476

(R)-glycerate

C6430

2-O-(α-D-mannosyl)-3-phospho-D-glycerate

C6426

2-O-(α-D-mannosyl)-D-glycerate

C6437

3-phospho-D-glyceroyl-phosphate

C6425

2-phospho-D-glycerate

C6438

3-phospho-D-glycerate

C2151

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

C2150

(2R)-2,3-dihydroxy-3-methylbutanoate

C2017

α-D-glucosamine 6-phosphate

C2765

1-oleoyl-2-lyso-glycerone phosphate

C6317

5,10-methenyltetrahydrofolate mono-L-glutamate

C6287

2-octaprenylphenol

C8958

superoxide

C8959

monodehydroascorbate radical

C8965

hydroxyl radical

C13114

1-chloro-2,4-dinitrobenzene

C4658

2,4-dinitrophenyl-S-glutathione

C4606

S-(hydroxymethyl)glutathione

C4734

dimethyl sulfide

C4678

glutathione

C3998

methanethiol

C4644

S-sulfanylglutathione

C5744

5-(2-hydroxyethyl)-4-methylthiazole

C5753

4-methyl-5-(2-phosphooxyethyl)thiazole

C5750

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

C5759

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

C12587

L-cysteate

C12637

3-sulfopyruvate

C2209

(2R)-3-sulfolactate

C7994

(2R)-phospho-3-sulfolactate

C4580

(R)-S-lactoylglutathione

C1689

trimethyl sulfonium

C7014

sulfate

C7016

sulfite

C7017

selenite

C7020

selenate

C7022

selenide

C7024

thiosulfate

C7025

OH-

C7028

nitrite

C7030

nitrate

C7034

hydrogensulfite

C7036

hydrogencarbonate

C7006

chloride

C6097

phosphate

C6093

diphosphate

C6094

triphosphate

C7864

Fe3+

C11023

Fe2+

C11009

Mg2+

C11006

Co2+

C4328

ammonium

C4320

H+

C6708

2-iminopropanoate

C6524

2-aminoprop-2-enoate

C6526

(2Z)-2-aminobut-2-enoate

C10301

agmatine

C3574

spermidine

C3548

putrescine

C8039

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

C8025

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

C8014

phosphoribulosylformimino-AICAR-phosphate

C8033

5-amino-4-imidazolecarboxyamide

C8043

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

C9096

(indol-3-yl)acetate

C4915

α-linolenoyl-CoA

C5056

linoleoyl-CoA

C5182

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

C5186

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

C4901

succinyl-CoA

C4937

3'-dephospho-CoA

C4913

malonyl-CoA

C5298

acetyl-CoA

C11400

phytenoyl-CoA

C5635

oleoyl-CoA

C7168

(Z)-15-tetracosenoyl-CoA

C1175

butanoyl-CoA

C14697

decanoyl-CoA

C14677

octanoyl-CoA

C5892

palmitoyl-CoA

C2873

pristanoyl-CoA

C6562

hexadecanedioyl-CoA

C2008

acetoacetyl-CoA

C10076

L-galactono-1,4-lactone

C10102

cis-dienelactone

C10100

trans-dienelactone

C2598

D-glucono-1,5-lactone

C10049

FMNH2

C10052

FMN

C10053

FAD

C5392

(S)-NADHX

C5394

(R)-NADHX

C14497

NADPH

C14500

NADH

C4020

NAD+

C4018

NADP+

C1680

menaquinol-8

C1672

menaquinol-7

C1674

menaquinol-9

C1679

menaquinol-6

C1677

menaquinol-10

C1670

menaquinol-11

C1671

menaquinol-12

C1673

menaquinol-13

C1863

demethylmenaquinol-8

C1860

demethylmenaquinol-7

C1862

demethylmenaquinol-9

C1857

demethylmenaquinol-6

C1856

demethylmenaquinol-10

C1859

demethylmenaquinol-11

C1861

demethylmenaquinol-12

C1864

demethylmenaquinol-13

C10611

(R)-lipoate

C10614

coenzyme A

C10597

7,8-dihydrofolate monoglutamate

C10595

N10-formyldihydrofolate

C7134

tetrahydropteroyl tri-L-glutamate

C7129

5,6,7,8-tetrahydrofolate

C4599

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

C6250

5,10-methylenetetrahydropteroyl mono-L-glutamate

C414

10-formyl-tetrahydrofolate mono-L-glutamate

C8566

5-methyltetrahydropteroyl tri-L-glutamate

C8565

5-methyltetrahydropteroyl mono-L-glutamate

C10986

L-ascorbate

C10982

nicotinate

C10988

riboflavin

C4210

pyridoxal 5'-phosphate

C4214

pyridoxine 5'-phosphate

C10143

menadione

C4985

(S)-1-pyrroline-5-carboxylate

C2323

precorrin-7

C2297

precorrin-8x

C2302

precorrin-3A

C2300

precorrin-5

C2317

precorrin-6B

C2308

precorrin-6A

C2314

precorrin-3B

C2320

precorrin-4

C2305

precorrin-1

C2311

precorrin-2

C1705

sirohydrochlorin

C1659

6,7-dimethyl-8-(1-D-ribityl)lumazine

C12708

7,8-dihydroneopterin 3'-phosphate

C12664

7,8-dihydroneopterin

C12696

7,8-dihydromonapterin

C12728

6-(hydroxymethyl)-7,8-dihydropterin

C12678

7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate

C12680

(7,8-dihydropterin-6-yl)methyl diphosphate

C12730

7,8-dihydroneopterin 3'-triphosphate

C10609

7,8-dihydropteroate

C5590

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

C9454

adenine

C7813

2'-deoxyadenosine

C7848

2'-deoxyguanosine

C15091

inosine

C15094

xanthosine

C15085

guanosine

C15088

adenosine

C7743

dAMP

C7840

dGMP

C7749

dITP

C7751

dGTP

C7783

dATP

C7747

dIDP

C7807

dGDP

C7823

dADP

C7817

IDP

C7795

GDP

C7757

ADP

C7809

AMP

C7827

GMP

C7741

IMP

C7811

XMP

C7844

ATP

C7759

ITP

C7745

GTP

C8714

UDP

C4012

5,6-dihydrouracil

C7801

5,6-dihydrothymine

C8707

cytosine

C8752

dUDP

C8720

dTDP

C8770

dUMP

C8744

dTMP

C8772

dCTP

C8724

dUTP

C11481

orotate

C6462

uridine 3'-monophosphate

C6460

cytidine-3'-monophosphate

C8739

uracil

C8755

dCMP

C8733

dCDP

C8732

CDP

C8764

dTTP

C8760

UTP

C8761

CTP

C7780

UDP-α-D-glucose

C7764

UDP-α-D-galacturonate

C5849

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

C7814

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

C7822

UDP-N-acetyl-α-D-muramate

C7824

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

C7722

UDP-α-D-glucuronate

C7734

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

C7776

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

C7782

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

C7742

UDP-N-acetyl-α-D-muramoyl-L-alanine

C7808

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

C8666

UDP-α-D-galactose

C7804

UDP-α-D-galactofuranose

C7740

UDP-α-D-sulfoquinovopyranose

C5848

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C5090

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C5094

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C5150

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

C8613

UDP-β-L-arabinopyranose

C7444

UDP-N-acetyl-α-D-glucosamine

C1939

dTDP-α-D-glucose

C1930

dTDP-β-L-rhamnose

C1896

dTDP-4-dehydro-β-L-rhamnose

C8423

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C10343

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C6945

5-fluorouracil

C2706

uridine

C2702

cytidine

C2523

2'-deoxycytidine

C2527

2'-deoxyuridine

C10601

thymine

C2241

UMP

C2245

CMP

C7649

isoguanine

C9540

preQ1

C13366

(indole-3-yl)acetonitrile

C13354

preQ0

C6829

salicylaldehyde

C3649

benzaldehyde

C8413

indole

C7694

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

C2915

menadiol

C11429

salicylate

C8974

4-aminobenzoate

C8968

benzoate

C5032

carbamate

C3536

L-α-amino-ε-keto-pimelate

C5579

L-serine

C11443

creatine

C11441

β-alanine

C5588

L-leucine

C5581

L-proline

C5597

L-alanine

C12067

glycine

C5609

L-glutamine

C8797

D-glutamate

C5607

L-glutamate

C5642

L-arginine

C5605

L-histidine

C5584

L-lysine

C5596

L-aspartate

C5577

L-threonine

C5612

L-cysteine

C5643

L-asparagine

C5573

L-tyrosine

C5575

L-tryptophan

C2469

L-phenylalanine

C8807

D-lysine

C8799

D-alanine

C12063

seleno-L-homocysteine

C12073

L-aspartyl-4-phosphate

C3652

L-threonine 3-O-phosphate

C3402

3-phospho-L-serine

C3628

sarcosine

C3621

N-acetyl-L-aspartate

C15000

N-acetyl-L-ornithine

C14976

N-acetyl-L-methionine

C14973

N-acetyl-L-glutamate

C13322

N-carbamoyl-L-aspartate

C11955

O-acetyl-L-homoserine

C12303

L-citrulline

C5603

L-isoleucine

C5571

L-valine

C12229

O-phospho-L-homoserine

C2426

S-sulfo-L-cysteine

C12233

L-glutamate-5-semialdehyde

C12227

O-succinyl-L-homoserine

C12245

L-homoserine

C12231

L-ornithine

C12239

L-aspartate 4-semialdehyde

C15292

S-adenosyl-L-methionine

C12203

S-adenosyl-L-homocysteine

C5585

meso-diaminopimelate

C5592

L-selenocysteine

C5583

L-methionine

C5595

L-cystathionine

C5580

L,L-diaminopimelate

C8950

chorismate

C6442

succinate

C6443

fumarate

C2802

(S)-malate

C8534

cis-aconitate

C8531

D-threo-isocitrate

C6185

(R)-lactate

C3308

pyruvate

C11517

acetate

C3421

formate

C3418

butanoate

C3412

decanoate

C3409

octanoate

C13266

(15Z)-tetracosenoate

C13210

oleate

C5001

apo-4'-lycopenoate

C6389

γ-linolenate

C6379

linoleate

C10590

α-linolenate

C10572

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

C13260

phytenate

C3383

palmitate

C11482

(R)-pantoate

C11485

D-gluconate

C2047

aldehydo-D-glucuronate

C2021

aldehydo-D-galacturonate

C3345

3-phenyl-2-oxopropanoate

C3351

glyoxylate

C3257

2-oxobutanoate

C3301

2-oxoglutarate

C6090

methylglyoxal

C2040

diacetyl

C10175

6-methoxy-2-all-trans-octaprenyl-1,4-benzoquinone

C10147

3-methyl-6-methoxy-2-octaprenyl-1,4-benzoquinone

C2858

glycolaldehyde

C3485

butan-1-al

C3483

formaldehyde

C3529

1-octanal

C3500

acetaldehyde

C14804

phytenal

C9494

D-glyceraldehyde

C7087

α-D-glucopyranose

C7085

β-D-glucopyranose

C2065

aldehydo-D-ribose

C2061

α-D-ribofuranose

C2062

β-D-ribofuranose

C3449

butan-1-ol

C3450

ethanol

C3731

glycerol

C6261

(3R)-linalool

C6262

(3S)-linalool

C10527

myo-inositol

C13592

1D-myo-inositol 2-monophosphate

C13576

1D-myo-inositol 1-monophosphate

C13588

1D-myo-inositol 6-monophosphate

C13580

1D-myo-inositol 5-monophosphate

C13584

1D-myo-inositol 4-monophosphate

C13573

1D-myo-inositol 3-monophosphate

C10025

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

C6241

1-oleoyl-sn-glycerol 3-phosphate

C3117

dioleoyl phosphatidate

C8322

di-trans,octa-cis-undecaprenyl phosphate

C9304

trans,octacis-decaprenyl phosphate

C8321

geranyl diphosphate

C5383

all-trans-octaprenyl diphosphate

C5378

geranylgeranyl diphosphate

C5382

all-trans-heptaprenyl diphosphate

C1810

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

C9075

mono-trans,octa-cis-decaprenyl diphosphate

C1813

di-trans,octa-cis-undecaprenyl diphosphate

C10899

rhodopin

C10874

apo-4'-lycopenal

C10131

hydroxy-β-zeacarotene

C10114

β-cryptoxanthin

C10138

zeaxanthin

C10869

1'-hydroxy-γ-carotene

C8168

9,15,9'-tri-cis-ζ-carotene

C10942

all-trans phytofluene

C8156

all-trans-ζ-carotene

C10930

all-trans neurosporene

C8170

9,9'-di-cis-ζ-carotene

C10929

plectaniaxanthin

C10863

myxol

C8158

β-carotene

C8174

β-zeacarotene

C10876

prolycopene

C10900

all-trans-lycopene

C10862

15-cis-phytoene

C11012

phytyl diphosphate

C4553

3-octaprenyl-4-hydroxybenzoate

C2258

phlorisovalerophenone

C2269

deoxyhumulone

C2261

4-prenylphlorisovalerophenone

C2266

deoxycohumulone

C4086

1-(β-D ribofuranosyl)nicotinamide

C10688

maltotriose

C10689

maltotetraose

C10692

maltoheptaose

C10691

maltohexaose

C10690

maltopentaose

C10693

sucrose

C3186

N-acetyl-α-D-glucosamine 1-phosphate

C5286

N-acetyl-β-D-glucosamine

C8835

β-D-fructofuranose

C11619

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

C10362

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

C10381

a peptidoglycan dimer (mycobacteria)

C10374

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

C10379

a peptidoglycan dimer (E. faeciums)

C10370

a peptidoglycan dimer (E. faecium, tetrapeptide)

C10372

a peptidoglycan dimer (S. aureus)

C14591

a peptidoglycan with D,D cross-link (S. aureus)

C14587

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

C10364

a peptidoglycan with D,D cross-links (mycobacteria)

C10383

a peptidoglycan with L,D cross-links (mycobacteria)

C13230

a peptidoglycan dimer (meso-diaminopimelate containing)

C361

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

C3131

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C3122

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C3127

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

C3130

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

C3132

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)5-D-alanyl-D-alanine

C3120

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C5529

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

C973

D-ribulose-1,5-bisphosphate

C3138

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

C3137

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C6673

sucrose 6F-phosphate

C1015

GDP-α-D-glucose

C10263

ADP-α-D-glucose

C1043

GDP-4-dehydro-α-D-rhamnose

C1009

GDP-α-D-mannose

C5615

D-glyceraldehyde 3-phosphate

C8811

α-D-glucopyranose 1-phosphate

C10356

4-phospho-D-erythronate

C10342

D-sedoheptulose 1,7-bisphosphate

C10338

5-phospho-α-D-ribose 1-diphosphate

C10350

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

C15289

D-sedoheptulose 7-phosphate

C10340

D-erythrose 4-phosphate

C10326

β-D-fructose 1,6-bisphosphate

C2989

β-D-fructofuranose 6-phosphate

C15303

D-fructose 6-phosphate

C6717

α-D-mannopyranose 6-phosphate

C6719

β-D-mannopyranose 6-phosphate

C2125

α-D-glucose 6-phosphate

C2123

β-D-glucose 6-phosphate

C8708

1-deoxy-D-xylulose 5-phosphate

C8704

D-xylulose 5-phosphate

C10604

D-ribulose 5-phosphate

C2057

α-D-ribose-1-phosphate

C2129

β-D-glucopyranose 1-phosphate

C2082

β-D-fructofuranose 1-phosphate

C8813

α-D-mannose 1-phosphate

C3678

aldehydo-L-galactonate

C3679

L-gulonate

C10267

pppGpp

C10266

ppGpp

C7655

8-oxo-GTP

C7647

8-oxo-dGTP

C5485

1-(5-phospho-β-D-ribosyl)-ATP

C5489

1-(5-phospho-β-D-ribosyl)-AMP

C7641

adenosine 3'-monophosphate

C7653

guanosine 3'-monophosphate

C5552

5'-deoxyadenosine

C10288

adenylo-succinate

C9773

5-fluorocytosine

C1804

P1,P4-bis(5'-adenosyl) tetraphosphate

C10284

2-hydroxy-dATP

C10290

5-hydroxy-CTP

C4243

β-nicotinamide D-ribonucleotide

C9444

2-sulfanyl-N6-dimethylallyladenosine37 in tRNA

C9443

2-methylsulfanyl-N6-dimethylallyladenosine37 in tRNA

C6596

2-iminosuccinate

C6599

2-iminobutanoate

C2576

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

C2562

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

C8518

γ-L-glutamyl-L-cysteine

C1434

D-alanyl-D-alanine