an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

H₂O

oxaloacetate

D-gluconate 6-phosphate

2-amino-2-deoxy-D-gluconate 6-phosphate

glycerone phosphate

dihydroxyacetone

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

N-acetyl-D-muramate 6-phosphate

3-phosphonopyruvate

phosphoenolpyruvate

glutathione disulfide

hydrogen peroxide

(S)-dihydroorotate

4-methylumbelliferyl glucoside

4-hydroxybenzaldehyde

scopolin

cis-coumarinic acid-β-D-glucoside

2-dehydro-3-deoxy-D-gluconate 6-phosphate

2-dehydro-3-deoxy-D-gluconate

3-deoxy-D-glycero-2,5-hexodiulosonate

3-dehydro-2-deoxy-D-gluconate

2-deoxygluconate

N6'-acetylkanamycin-B

xanthine

CO₂

hydrogenobyrinate a,c-diamide

hydrogenobyrinate

prenyl diphosphate

isopentenyl diphosphate

ManNAc-GlcNAc-PP-undecaprenol

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

carbamoyl phosphate

L-arginino-succinate

canavaninosuccinate

O-ureido-L-homoserine

L-canavanine

CDP-glycerol

2-C-methyl-D-erythritol 4-phosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

O-acetyl-L-serine

pseudouridine 5'-phosphate

3'-phosphoadenylyl-sulfate

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

α-D-glucosamine 1-phosphate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

6-phospho D-glucono-1,5-lactone

histidinol

L-histidinol phosphate

salicyl alcohol

thiamine phosphate

S-adenosyl 3-(methylsulfanyl)propylamine

(S)-4-amino-5-oxopentanoate

preuroporphyrinogen

porphobilinogen

5-aminolevulinate

prephenate

enol-phenylpyruvate

(S)-3-methyl-2-oxopentanoate

4-methyl-2-oxopentanoate

3-methyl-2-oxobutanoate

citrate

(R)-2,3-dihydroxy-3-methylpentanoate

S-ribosyl-L-homocysteine

5-(methylsulfanyl)-α-D-ribose

S-methyl-5'-thioadenosine

3-mercaptopyruvate

(S)-2,3,4,5-tetrahydrodipicolinate

3-dehydroshikimate

shikimate

nicotinate adenine dinucleotide

β-nicotinate D-ribonucleotide

coproporphyrinogen III

P¹,P⁴-bis(5'-guanosyl) tetraphosphate

2-dehydropantoate

orotidine 5'-phosphate

hydrogen selenide

3-keto-β-D-galactose

5-enolpyruvoyl-shikimate 3-phosphate

shikimate 3-phosphate

(R)-4'-phosphopantothenoyl-L-cysteine

(R)-4'-phosphopantothenate

4'-phosphopantetheine

5-hydroxyindole acetaldehyde

5-hydroxytryptophol

3-methoxy-4-hydroxyphenylglycolaldehyde

indole-3-glycol aldehyde

indole-3-glycol

isobutanol

3-methylbutanal

3-methylbutanol

2-methylbutanal

2-methylbutanol

2-phenylethanol

5-amino-6-(D-ribitylamino)uracil

3-phosphooxypyruvate

3-dehydroquinate

3-deoxy-D-arabino-heptulosonate 7-phosphate

anthranilate

N-(5-phosphoribosyl)-anthranilate

imidazole acetol-phosphate

(R)-pantothenate

acetyl phosphate

γ-L-glutamyl 5-phosphate

H₂

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

(2S)-2-isopropylmalate

carbonic acid

thiamine diphosphate

2-(α-hydroxyethyl)thiamine diphosphate

S-acetyldihydrolipoamide

dihydrolipoamide

S-formylglutathione

methylsalicylate

3-ureidopropanoate

oxalate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

N-succinyl-2-amino-6-ketopimelate

N-succinyl-L,L-2,6-diaminopimelate

ethanolamine

N-acetylmuramoyl-L-ala-D-glu

N-acetylmuramoyl-L-ala-D-glu-(L)-meso-diaminopimelate -(L)-D-ala

(4,5-dihydro-5-oxofuran-2-yl)-acetate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

oxalosuccinate

S-methyl-5-thio-α-D-ribose 1-phosphate

5-(methylsulfanyl)-ribulose 1-phosphate

4-phosphooxy-L-threonine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

L-selenocystathionine

2-oxovalerate

3-ethylmalate

(2S)-2-isopropyl-3-oxosuccinate

α-ribazole 5'-phosphate

α-ribazole

5,6-dimethylbenzimidazole

(R)-1-aminopropan-2-ol

(R)-1-amino-2-propanol O-2-phosphate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

isochorismate

acetoacetate

hydroxylamine

2,5-didehydro-D-gluconate

2-keto-D-gluconate

indole-3-ethanol

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

autoinducer 2

D-erythro-imidazole-glycerol-phosphate

histidinal

4-amino-4-deoxychorismate

quinolinate

N-(2,3-dihydroxybenzoyl)-L-serine trimer

N-(2,3-dihydroxybenzoyl)-L-serine

N-(2,3-dihydroxybenzoyl)-L-serine dimer

hexulose 6-phosphate

hydroxypyruvate

propionamide

(indol-3-yl)acetamide

4-guanidinobutanoate

4-guanidinobutyramide

acrylate

acrylamide

(lipoyl)adenylate

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

4-aminobutanoate

(indol-3-yl)pyruvate

2-oleoylglycerol

5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate

1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one

2-hydroxy-5-(methylsulfanyl)-3-oxopent-1-enyl 1-phosphate

6-amino-2-oxohexanoate

2-iminoacetate

ethylamine

N-ethylglycine

methylamine

2-maleylacetate

3-carboxy-2,5-dihydro-5-oxofuran-2-acetate

(S)-2,3-dihydrodipicolinate

4-fumaryl-acetoacetate

norspermidine

carboxynorspermidine

(S)-2-amino-6-oxohexanoate

β-D-ribosylnicotinate

(5R)-5-benzyl-hydantoin

(5S)-5-benzyl-hydantoin

β-D-fructose 2,6-bisphosphate

glutathionylspermidine

L-gulono-1,4-lactone

4-amino-4-deoxy-α-L-arabinopyranosyl ditrans,octacis-undecaprenyl phosphate

dimethylsulfoniopropanoate

4-acetamidobutanoate

4-acetamidobutanal

D-glucurono-6,3-lactone

propynoate

prop-2-ynal

3,4-dihydroxyphenylacetaldehyde

5-hydroxyindole acetate

4-imidazoleacetate

imidazole acetaldehyde

dialurate

L-xylo-hex-3-ulono-1,4-lactone

N-acetyl-L,L-2,6-diaminopimelate

carbon monoxide

1,6-anhydro-N-acetyl-β-muramate

2-amino-3-carboxymuconate-6-semialdehyde

5-ureidoimidazole-4-carboxylate

5-aminoimidazole-4-carboxylate

4-aminoimidazole

3,5-dihydro-4H-imidazol-4-one

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

N⁵-carboxyaminoimidazole ribonucleotide

gallate

1,2,3,5-tetrahydroxybenzene

pyrogallol

phloroglucinol

dihydrophloroglucinol

3-hydroxy-5-oxohexanoate

3-hydroxy-5- oxohexanoyl-CoA

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

1-deoxy-L-glycero-tetrulose 4-phosphate

4-amino-2-methyl-5-pyrimidinemethanol

glutathioselenol

selenodiglutathione

pseudouridine

α-D-galacturonate 1-phosphate

5-aminopentanoate

1-piperideine 6-carboxylate

1-piperideine-2-carboxylate

pyruvic oxime

L-dehydro-ascorbate

ammonia

5-hydroxyindole thiazolidine carboxylate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

cyclic-2,3-O-oxalyl-L-threonate

dehydroascorbate (bicyclic form)

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

cyclic- 3,4-O-oxalyl-L-threonate

2,3-dioxo-L-gulonate

2-carboxy-L-xylonolactone

2-carboxy-L-threo-pentonate

meso-diaminopimeloyl-alanine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

2-iminobutanoate

2-iminopropanoate

2-iminosuccinate

L-homocysteine

4-methylphenol

L-α-amino-ε-keto-pimelate

L-alanine

glycine

L-phenylalanine

L-tryptophan

L-valine

L-isoleucine

L-leucine

L-selenocysteine

L-proline

L-methionine

L-cysteine

L-aspartate

L-glutamine

L-glutamate

L-histidine

L-lysine

L-ornithine

L-arginine

L-asparagine

L-serine

L-threonine

L-tyrosine

L,L-diaminopimelate

L-aspartyl-4-phosphate

L-2,4-diaminobutanoate

L-cystathionine

N-carbamoyl-L-aspartate

L-2-acetamido-6-oxoheptanedioate

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-formyl-L-methionine

L-citrulline

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

L-aspartate 4-semialdehyde

L-homoserine

O-phospho-L-homoserine

S-sulfo-L-cysteine

L-glutamate-5-semialdehyde

L-cystine

O-succinyl-L-homoserine

1-aminocyclopropane-1-carboxylate

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

L-selenomethionine

seleno-L-homocysteine

S-sulfanyl-L-cysteine

L-saccharopine

L-threonine 3-O-phosphate

3-phospho-L-serine

O-acetyl-L-homoserine

N-formimino-glycine

N-acetyl-L-glutamate

N-acetyl-L-methionine

sarcosine

S-methyl-L-methionine

D-alanine

D-aspartate

D-glutamate

D-lysine

D-methionine

D-phenylalanine

β-alanine

(R)-3-amino-2-methylpropanoate

(S)-3-amino-2-methylpropanoate

GDP

adenylo-succinate

IMP

GTP

ADP

ATP

AMP

hypoxanthine

5'-deoxyadenosine

dATP

dGTP

2'-deoxyadenosine

2'-deoxyguanosine

2'-deoxyinosine

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

guanosine 3'-monophosphate

guanosine 2',3'-cyclic monophosphate

adenosine 3'-monophosphate

adenosine 2',3'-cyclic monophosphate

ppGpp

pppGpp

GMP

dADP

dGDP

ITP

IDP

dITP

dIDP

XMP

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

dGMP

dAMP

5,6-dihydrothymine

5,6-dihydrouracil

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

CDP-4-dehydro-6-deoxy-α-D-glucose

ADP-α-D-glucose

GDP-α-D-mannose

GDP-4-dehydro-α-D-rhamnose

GDP-β-L-fucose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

CDP-4-dehydro-3,6-dideoxy-α-D-glucose

dTDP-α-D-glucose

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

UDP-N-acetyl-α-D-mannosamine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-α-D-glucose

UDP-α-D-galactose

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-α-D-glucuronate

UDP-α-D-galactofuranose

UDP-α-D-galacturonate

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-N-acetyl-β-neuraminate

guanine

adenine

purine

uracil

thymine

preQ₁

NADP⁺

NAD⁺

NADPH

NADH

uridine 3'-monophosphate

cytidine-3'-monophosphate

cyclic di-3',5'-guanylate

uridine 2'3'-cyclic monophosphate

cytidine 2',3'-cyclic monophosphate

dUMP

dCMP

dTMP

dCDP

dTDP

dUDP

dCTP

dUTP

dTTP

UDP

CDP

β-nicotinamide D-ribonucleotide

CTP

UTP

UMP

CMP

two adjacent thymidines in DNA

(5R)-5,6-dihydro-5-(thymidin-7-yl)thymidine (in DNA)

2'-deoxyuridine

2'-deoxycytidine

thymidine

xanthosine

guanosine

adenosine

inosine

uridine

cytidine

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

5'-deoxy-5'-fluoroadenosine

D-gluconate

D-mannonate

D-altronate

L-gulonate

aldehydo-L-galactonate

1-(β-D ribofuranosyl)nicotinamide

5-dehydro-4-deoxy-D-glucuronate

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

3'-ketolactose

1-O-acetyl-α-maltose

kanamycin B

lotaustralin

taxiphyllin

linamarin

linustatin

neolinustatin

arbutin-6-phosphate

salicin 6-phosphate

methyl β-D-glucoside 6-phosphate

5-phospho-α-D-ribose 1-diphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

D-sedoheptulose 1,7-bisphosphate

4-phospho-D-erythronate

L-rhamnulose 1-phosphate

α-D-mannose 1-phosphate

α-D-glucopyranose 1-phosphate

α-D-galactose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

α-D-galactose 6-phosphate

β-D-galactose 6-phosphate

β-D-fructose 1,6-bisphosphate

D-tagatofuranose 1,6-bisphosphate

D-tagatofuranose 6-phosphate

β-D-fructofuranose 6-phosphate

D-fructose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-ribose-1-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

2-deoxy-α-D-ribose 1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

L-ribulose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

sucrose 6^G-phosphate

N,N'-diacetylchitobiose 6'-phosphate

N-monoacetylchitobiose 6'-phosphate

sucrose 6^F-phosphate

β-D-cellobiose 6'-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

D-ribulose-1,5-bisphosphate

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (mycobacteria)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan tetramer with an L,D cross-link (Enterococcus faecium)

β-L-rhamnopyranose

α-L-rhamnopyranose

β-D-fructofuranose

glycolaldehyde

α-L-arabinopyranose

α-D-xylopyranose

aldehydo-D-ribose

β-D-ribopyranose

α-D-ribofuranose

β-D-ribofuranose

α-D-galactopyranose

β-D-galactopyranose

β-D-glucopyranose

α-D-glucopyranose

D-glyceraldehyde

L-glyceraldehyde

D-xylulose

L-ribulose

keto-L-rhamnulose

keto-D-fructose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-α-D-mannosamine

N-acetyl-β-D-glucosamine

N-acetyl-β-neuraminate

glycerol

D-mannitol 1-phosphate

galactitol

XXXG xyloglucan oligosaccharide

6-kestotriose

6,6-kestotetraose

cellotetraose

β-D-cellobiose

maltotriose

6_G-kestotriose

1,6-kestotetraose

1-kestotriose

1,1-kestotetraose

4'-α-L-Ara4N-α-Kdo-(2→4)-α-Kdo-(2→6)-[P4'-α-L-ara4N]-lipid A

α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A

sucrose

melibiose

allolactose

α-lactose

maltohexaose

maltotetraose

maltopentaose

maltoheptaose

stachyose

raffinose

XXLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XLLG xyloglucan oligosaccharide

aldehydo-D-galacturonate

salicylaldehyde

4-methylumbelliferone

scopoletin

coumarin

all-trans-retinol

all-trans-retinyl palmitate

(2E,6E)-farnesyl diphosphate

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

(2E,6E)-farnesol

(3S)-linalool

(3R)-linalool

geranyl diphosphate

cephalosporin C

deacetylcephalosporin C

enterobactin

ferric-enterobactin complex

iron(III) dicitrate

3-decaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-hexaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenol

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

geranylgeranyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-nonaprenyl diphosphate

dioleoyl phosphatidate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-oleoyl-2-lyso-glycerone phosphate

1-oleoyl-sn-glycerol 3-phosphate

myo-inositol

1D-myo-inositol 3-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 2-monophosphate

phytate

D-myo-inositol (1,2,4,5,6)-pentakisphosphate

hydroquinone

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylglycol

3,4-dihydroxyphenylacetate

3,4-dihydroxymandelate

protocatechuate

2,3-dihydroxybenzoate

ethylene glycol

sphingosine

sphingosine 1-phosphate

ethanol

propan-1-ol

phytol

butan-1-ol

methanol

(2E,6E)-farnesal

fluoroacetaldehyde

methylglyoxal

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

benzaldehyde

phytenal

(S)-lactaldehyde

acetaldehyde

isobutanal

1-propanal

formaldehyde

butan-1-al

1-octanal

(R)-acetoin

diacetyl

acetone

pyruvate

glyoxylate

2-oxoglutarate

2-oxobutanoate

4-(methylsulfanyl)-2-oxobutanoate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

salicylate

4-aminobenzoate

benzoate

orotate

acetate

(R)-pantoate

fluoroacetate

(S)-1-pyrroline-5-carboxylate

D-tagaturonate

aldehydo-D-glucuronate

palmitate

butanoate

octanoate

oleate

linoleate

γ-linolenate

phytenate

(2E,6E)-farnesoate

3-oxoadipate

formate

propanoate

(S)-lactate

(R)-lactate

(R)-glycerate

cis-aconitate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

3-(carbamoylamino)-2-methylpropanoate

chorismate

D-glucarate

succinate

fumarate

(S)-malate

Gro-P-ManNAc-GlcNAc-PP-undecaprenol

4-tyrosol

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

4-hydroxybenzoate

4-vinylguaiacol

urate

6,8-dihydroxypurine

8-hydroxypurine

coumarinate

ferulate

4-nitrophenol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

3-demethylubiquinol-8

demethylmenaquinol-8

menaquinol-8

ubiquinol-8

indole

(indol-3-yl)acetaldehyde

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

3-methoxy-4-hydroxyphenylglycol

vanillyl mandelate

hydrogen cyanide

preQ₀

(2R)-2-hydroxy-2-methylbutanenitrile

2-hydroxy-2-methylpropanenitrile

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

7,8-dihydroneopterin 3'-triphosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydroneopterin

7,8-dihydromonapterin

7,8-dihydroneopterin 3'-phosphate

7,8-dihydropteroate

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

FMN

riboflavin

FAD

FMNH₂

reduced riboflavin

FADH₂

6,7-dimethyl-8-(1-D-ribityl)lumazine

dipicolinate

sirohydrochlorin

cobyrinate

precorrin-4

precorrin-3B

cobalt-precorrin-2

precorrin-2

precorrin-6A

precorrin-6B

precorrin-8x

precorrin-7

precorrin-3A

precorrin-5

precorrin-1

cobalt-precorrin-6A

cobalt-precorrin-5B

cobalt-precorrin-5A

cobalt-precorrin-4

cobalt-precorrin-6B

cobalt-precorrin-8

cobalt-precorrin-7

cobalt-precorrin-3

adenosylcobalamin

L-ascorbate

thiamine

nicotinate

nicotinamide

pyridoxine 5'-phosphate

pyridoxal 5'-phosphate

coenzyme A

(R)-lipoate

(R)-NADHX

(S)-NADHX

D-glucono-1,5-lactone

trans-dienelactone

cis-dienelactone

L-galactono-1,4-lactone

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

acetyl-CoA

(3S)-citryl-CoA

malonyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

isobutanoyl-CoA

2-methylbutanoyl-CoA

succinyl-CoA

3'-dephospho-CoA

2-methylacetoacetyl-CoA

CoA-disulfide

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

methylacrylyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

palmitoyl-CoA

propanoyl-CoA

butanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

crotonyl-CoA

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

5-amino-4-imidazolecarboxyamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

acetamide

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

sn-glycero-3-phosphocholine

choline

agmatine

spermidine

putrescine

cadaverine

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

nitrate

nitrite

sulfite

selenate

hydrogencarbonate

thiosulfate

superoxide

selenide

selenite

hydrogensulfite

sulfate

molybdate

phosphonate

phosphate

diphosphate

triphosphate

Fe³⁺

Ni²⁺

Co²⁺

Zn²⁺

Cd²⁺

Fe²⁺

Cu²⁺

Mn²⁺

H⁺

K⁺

Na⁺

ammonium

trimethyl sulfonium

3-(methylsulfanyl)propanal

methionol

S-(hydroxymethyl)glutathione

3-dimethylsulfoniopropionaldehyde

dimethyl sulfide

glutathione

(R)-S-lactoylglutathione

3-sulfopyruvate

L-cysteate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

thiocyanate

methanethiol

S-sulfanylglutathione

4-nitrophenyl phosphate

nitric oxide

monodehydroascorbate radical

2-methoxy-6-(all-trans-octaprenyl)phenol

2-octaprenylphenol

(S)-3-hydroxy-isobutanoate

3-(all-trans-octaprenyl)benzene-1,2-diol

5,10-methenyltetrahydrofolate mono-L-glutamate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

N-acetyl-D-mannosamine 6-phosphate

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

oxygen

hydrogen sulfide

uroporphyrinogen-III

protoporphyrin IX

protoporphyrinogen IX

coproporphyrinogen I

uroporphyrinogen-I

siroheme

protoheme

cobalt-sirohydrochlorin

adenosylcobyrate

adenosyl-cob(III)yrinate a,c-diamide

adenosylcobalamin 5'-phosphate

adenosylcobinamide-GDP

adenosyl-cobinamide phosphate

adenosylcobinamide

cob(II)yrinate a,c-diamide

cobalt-factor III

cob(II)yrinate c-monoamide

cob(I)yrinate a,c-diamide

phosphonoacetaldehyde

(2-aminoethyl)phosphonate

ethylphosphate