an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

2-carboxy-L-threo-pentonate

2-carboxy-L-xylonolactone

2,3-dioxo-L-gulonate

cyclic- 3,4-O-oxalyl-L-threonate

dehydroascorbate (bicyclic form)

cyclic-2,3-O-oxalyl-L-threonate

L-dehydro-ascorbate

5-hydroxyindole thiazolidine carboxylate

pyruvic oxime

1-piperideine 6-carboxylate

α-D-galacturonate 1-phosphate

L-xylo-hex-3-ulono-1,4-lactone

L-gulono-1,4-lactone

D-glycero-β-D-manno-heptose 1,7-bisphosphate

D-glycero-β-D-manno-heptose 1-phosphate

7-epicholate

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

4-amino-2-methyl-5-pyrimidinemethanol

N²-succinyl-L-ornithine

N²-succinyl-L-arginine

5-dehydro-4-deoxy-D-glucarate

(2Z)-2-(acetamidomethylene)succinate

3-hydroxy-2-methylpyridine-5-carboxylate

3-hydroxy-2-methylpyridine-4,5-dicarboxylate

5-formyl-3-hydroxy-2-methylpyridine-4-carboxylate

pseudouridine

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

(S)-4-hydroxy-2-oxohexanoate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-5-amino-3-oxohexanoate

(3S,5S)-3,5-diaminohexanoate

hydroxypyruvate

N⁵-carboxyaminoimidazole ribonucleotide

dialurate

2-amino-3-carboxymuconate-6-semialdehyde

1,6-anhydro-N-acetyl-β-muramate

carbon monoxide

acetoacetate

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

3-oxo-5,6-didehydrosuberyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

urea

selenodiglutathione

glutathioselenol

3'-phosphoadenylyl-sulfate

(2S)-2-isopropyl-3-oxosuccinate

3-ethylmalate

2-oxovalerate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

(R)-4'-phosphopantothenoyl-L-cysteine

(E)-2-benzylidenesuccinyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

(E)-4-coumaroyl-CoA

2,3-didehydroadipyl-CoA

glutathione disulfide

4-prenylphlorisobutyrophenone

3-(O-geranylgeranyl)-sn-glycerol 1-phosphate

S-methyl-5'-thioadenosine

S-methyl-5-thio-α-D-ribose 1-phosphate

5-deoxy-α-ribose 1-phosphate

oxalosuccinate

4-aminobutanoate

3-oxopropanoate

(R)-4'-phosphopantothenate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

chloroacetaldehyde

(R)-1-amino-2-propanol O-2-phosphate

N-acetyl-D-muramate 6-phosphate

2-(α-hydroxyethyl)thiamine diphosphate

enol-phenylpyruvate

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

7,8-diaminopelargonate

2-phosphoglycolate

glycolate

squalene

hop-22(29)-ene

ethanolamine

1-deoxy-L-glycero-tetrulose 4-phosphate

4-methyl-2-oxopentanoate

dethiobiotin

N-(5-phosphoribosyl)-anthranilate

anthranilate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

5-amino-6-(D-ribitylamino)uracil

3-deoxy-α-D-manno-2-octulosonate

3-deoxy-D-manno-octulosonate 8-phosphate

orotidine 5'-phosphate

3-phosphooxypyruvate

pseudouridine 5'-phosphate

itaconate

4-pyridoxolactone

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

L-β-lysine

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

creatinine

(L-threonylcarbamoyl)adenylate

(2S)-2-isopropylmalate

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

citrate

5-methylcytosine

5-enolpyruvoyl-shikimate 3-phosphate

isopentenyl diphosphate

hydrogen peroxide

3-phosphonopyruvate

4'-phosphopantetheine

tartronate semialdehyde

acetyl phosphate

6-phospho D-glucono-1,5-lactone

D-gluconate 6-phosphate

4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate

α-D-glucosamine 1-phosphate

prephenate

N²-succinyl-L-glutamate 5-semialdehyde

N²-succinylglutamate

4-acetamidobutanal

4-acetamidobutanoate

3-dehydroquinate

3-dehydroshikimate

shikimate

shikimate 3-phosphate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-3-methyl-2-oxopentanoate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

5-phospho-β-D-ribosylamine

N¹-(5-phospho-β-D-ribosyl)glycinamide

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

3-deoxy-D-arabino-heptulosonate 7-phosphate

thiamine diphosphate

4-guanidinobutyramide

(S)-2-amino-6-oxohexanoate

carboxynorspermidine

norspermidine

(S)-dihydroorotate

5-aminolevulinate

5-hydroxytryptophol

5-hydroxyindole acetaldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

indole-3-glycol

indole-3-glycol aldehyde

isobutanol

3-methylbutanol

3-methylbutanal

2-methylbutanol

2-methylbutanal

2-phenylethanol

pimeloyl-CoA

8-amino-7-oxononanoate

β-D-ribosylnicotinate

5,6-dimethylbenzimidazole

α-ribazole

α-ribazole 5'-phosphate

α-D-galactosyl-diphosphoundecaprenol

succinate semialdehyde

2-C-methyl-D-erythritol 4-phosphate

carbonic acid

4-amino-4-deoxychorismate

lipid X

lipid A disaccharide (E. coli)

lipid IV_A

imidazole acetol-phosphate

L-histidinol phosphate

histidinal

histidinol

D-erythro-imidazole-glycerol-phosphate

(S)-2,3,4,5-tetrahydrodipicolinate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

5-androstene-3,17-dione

pregn-5-ene-3,20-dione-17-ol

pregn-5-ene-3,20-dione

2-oleoylglycerol

L-canavanine

L-arginino-succinate

canavaninosuccinate

carbamoyl phosphate

O-ureido-L-homoserine

N-acetyl-L-glutamate 5-semialdehyde

N-acetylglutamyl-phosphate

4-phosphooxy-L-threonine

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

prenyl diphosphate

nigerose

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

hydrogen selenide

O-acetyl-L-serine

porphobilinogen

preuroporphyrinogen

(S)-4-amino-5-oxopentanoate

H₂

hydrogenobyrinate

hydrogenobyrinate a,c-diamide

2-iminoacetate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

thiamine phosphate

γ-L-glutamyl 5-phosphate

DNA without lesion

(R)-pantothenate

3-methyl-2-oxobutanoate

2-dehydropantoate

selenophosphate

glycerone phosphate

quinolinate

hydroxylamine

ADP-D-glycero-β-D-manno-heptose

ADP-L-glycero-β-D-manno-heptose

oxaloacetate

phosphoenolpyruvate

β-nicotinate D-ribonucleotide

nicotinate adenine dinucleotide

coproporphyrinogen III

CO₂

H₂O

ammonia

(2E,6E)-farnesyl diphosphate

pristanate

DNA with lesion

phenylacetate

ethylphosphate

adenosylcobalamin

cob(I)alamin

cobalt-factor III

cobalt-precorrin-3

cobalt-sirohydrochlorin

cobalt-precorrin-7

cobalt-precorrin-8

cobalt-precorrin-6B

cobalt-precorrin-4

cobalt-precorrin-5A

chlorophyllide a

protochlorophyllide a

adenosylcobyrate

cobalt-precorrin-5B

cobalt-precorrin-6A

cob(I)inamide

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

Mg-protoporphyrin

adenosylcobinamide

adenosyl-cobinamide phosphate

adenosylcobinamide-GDP

adenosylcobalamin 5'-phosphate

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

3,8-divinyl protochlorophyllide a

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

magnesium-protoporphyrin IX 13-monomethyl ester

cob(II)yrinate c-monoamide

cob(II)yrinate a,c-diamide

cobyrinate

protoheme

hydrogen cyanide

N₂

uroporphyrinogen-I

coproporphyrinogen I

protoporphyrin IX

uroporphyrinogen-III

protoporphyrinogen IX

siroheme

hydrogen sulfide

oxygen

2-chloroacetate

sn-glycerol 1-phosphate

sn-glycerol 3-phosphate

(R)-glycerate

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2R)-2,3-dihydroxy-3-methylbutanoate

1-oleoyl-2-lyso-glycerone phosphate

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

5,10-methenyltetrahydrofolate mono-L-glutamate

(S)-3-hydroxy-isobutanoate

2-octaprenylphenol

superoxide

monodehydroascorbate radical

nitric oxide

S-(hydroxymethyl)glutathione

dimethyl sulfide

S-methyl-L-methionine

methionol

3-(methylsulfanyl)propanal

glutathione

thiocyanate

methanethiol

5-(2-hydroxyethyl)-4-methylthiazole

4-methyl-5-(2-phosphooxyethyl)thiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

L-cysteate

3-sulfopyruvate

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

selenide

thiosulfate

nitrite

nitrate

hydrogensulfite

hydrogencarbonate

molybdate

phosphate

triphosphate

diphosphate

Fe²⁺

Mg²⁺

Co²⁺

H⁺

ammonium

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

N-acetyl-L-glutaminyl-L-glutamine

N-acetyl-L-glutaminyl-L-glutamine amide

D-alanyl-D-alanine

2-iminopropanoate

2-iminobutanoate

2-iminosuccinate

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

agmatine

2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-chloro-5-deoxy-D-ribonate

5-chloro-4-hydroxy-2-oxopentanoate

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

nicotinamide

3α,7α,12β-trihydroxy-5β-cholan-24-oate

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

cholest-4-en-3-one

(25S)-26-hydroxycholest-4-en-3-one

(25S)-26-oxocholest-4-en-3-one

17-hydroxy-3-oxo-4-pregnane-20-carboxyl-CoA

3-oxo-4,17-pregnadiene-20-carboxyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

22-hydroxy-3-oxochol-4-en-24-oyl-CoA

3-oxochol-4,22-dien-24-oyl-CoA

3-oxochol-4-en-24-oyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3-oxocholest-4,24-dien-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

(25S)-3-oxocholest-4-en-26-oyl-CoA

pregnenolone

campest-4-en-3-one

progesterone

testosterone

campest-4-en-3β-ol

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

androsta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

5α-androstane-3,17-dione

cholate

glycocholate

3-dehydrocholate

isocholate

3-β-hydroxyandrost-5-en-17-one

androsterone

cholesterol

cholest-5-en-3-one

17-α-hydroxypregnenolone

(indol-3-yl)acetate

(S)-3-aminobutanoyl-CoA

2-methylbutanoyl-CoA

2-methylacetoacetyl-CoA

methylacrylyl-CoA

(2E,5Z)-tetradecenoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-hydroxyisovaleryl-CoA

(E)-2-methylcrotonoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

2-trans-nonenoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

(3S)-hydroxyadipyl-CoA

isobutanoyl-CoA

(3S)-citryl-CoA

(R)-2-hydroxyglutaryl-CoA

(E)-glutaconyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

itaconyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

phenylacetyl-CoA

3'-dephospho-CoA

succinyl-CoA

malonyl-CoA

benzoyl-CoA

acetyl-CoA

(R)-methylmalonyl-CoA

crotonyl-CoA

phytenoyl-CoA

(2E)-octadec-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

(S)-malyl-CoA

oleoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(Z)-15-tetracosenoyl-CoA

butanoyl-CoA

propanoyl-CoA

octanoyl-CoA

decanoyl-CoA

palmitoyl-CoA

pristanoyl-CoA

hexadecanedioyl-CoA

3-oxoadipyl-CoA

acetoacetyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

L-galactono-1,4-lactone

FAD

FADH₂

FMNH₂

FMN

(S)-NADHX

(R)-NADHX

NADPH

NADH

NADP⁺

NAD⁺

ubiquinol-8

menaquinol-8

demethylmenaquinol-8

3-demethylubiquinol-8

molybdopterin

coenzyme A

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

L-ascorbate

riboflavin

nicotinate

4-pyridoxate

pyridoxamine

pyridoxine

pyridoxal 5'-phosphate

pyridoxal

pyridoxine 5'-phosphate

menadione

(S)-1-pyrroline-5-carboxylate

precorrin-6A

precorrin-3B

precorrin-4

precorrin-5

precorrin-1

precorrin-2

precorrin-3A

precorrin-6B

precorrin-7

precorrin-8x

sirohydrochlorin

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

molybdopterin adenine dinucleotide

7,8-dihydroneopterin 3'-phosphate

7,8-dihydroneopterin

6-(hydroxymethyl)-7,8-dihydropterin

cyclic pyranopterin phosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate

7,8-dihydroneopterin 2',3'-cyclic phosphate

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydropteroate

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

adenine

guanine

2'-deoxyadenosine

2'-deoxyguanosine

adenosine

xanthosine

inosine

guanosine

hypoxanthine

dAMP

dGMP

dIMP

dATP

dGTP

dITP

dADP

dGDP

dIDP

GDP

ADP

IDP

XMP

IMP

GMP

AMP

XTP

GTP

ITP

ATP

cytosine

dCMP

uracil

orotate

dUMP

dTMP

dTDP

dTTP

CDP

dCDP

dCTP

dUDP

dUTP

UTP

UDP

CTP

UDP-α-D-galacturonate

UDP-α-D-galactofuranose

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-mannosamine

UDP-α-D-galactose

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-α-D-glucose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-β-L-rhamnose

dTDP-α-D-glucose

dTDP-4-dehydro-β-L-rhamnose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

CDP-4-dehydro-6-deoxy-α-D-glucose

CDP-α-D-glucose

5-fluorouracil

uridine

cytidine

thymine

CMP

UMP

preQ₁

preQ₀

(indole-3-yl)acetonitrile

salicylaldehyde

2-[(1R,6S)-1,6-dihydroxycyclohexa-2,4-dien-1-yl]acetyl-coA

4-tyrosol

3-methoxy-4-hydroxyphenylglycol

benzaldehyde

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

menadiol

4-methylphenol

3,4-dihydroxyphenylglycol

3,4-dihydroxyphenylglycolaldehyde

salicylate

4-aminobenzoate

benzoate

L-α-amino-ε-keto-pimelate

L-serine

creatine

(R)-β-lysine

β-alanine

(S)-3-amino-2-methylpropanoate

L-leucine

L-proline

glycine

L-alanine

L-glutamine

D-glutamate

L-glutamate

L-lysine

L-histidine

L-arginine

L-aspartate

L-threonine

L-asparagine

L-tyrosine

L-cysteine

L-tryptophan

L-phenylalanine

D-alanine

L-aspartyl-4-phosphate

L-saccharopine

sarcosine

N-acetyl-L-ornithine

N-acetyl-L-methionine

N-acetyl-L-glutamate

N-carbamoyl-L-aspartate

O-acetyl-L-homoserine

L-threonine 3-O-phosphate

3-phospho-L-serine

L-citrulline

L-valine

L-isoleucine

O-succinyl-L-homoserine

O-phospho-L-homoserine

L-aspartate 4-semialdehyde

L-ornithine

L-canaline

S-sulfo-L-cysteine

L-homocysteine

L-homoserine

L-glutamate-5-semialdehyde

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

meso-diaminopimelate

L-selenocysteine

L-methionine

L-cystathionine

L,L-diaminopimelate

(3E)-2-oxohex-3-enedioate

chorismate

succinate

fumarate

(S)-malate

D-glucarate

D-galactarate

(2R,3S)-2-methylisocitrate

cis-2-methylaconitate

cis-aconitate

D-threo-isocitrate

(S)-lactate

(R)-lactate

pyruvate

acetate

formate

propanoate

butanoate

decanoate

octanoate

(15Z)-tetracosenoate

oleate

(3E,5Z)-tetradecadienoate

linoleate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

apo-4'-lycopenoate

phytenate

palmitate

(R)-pantoate

aldehydo-D-glucuronate

aldehydo-D-galacturonate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

glyoxylate

2-oxobutanoate

2-oxoglutarate

methylglyoxal

diacetyl

glycolaldehyde

butan-1-al

formaldehyde

1-octanal

1-propanal

isobutanal

acetaldehyde

phytenal

D-glyceraldehyde

α-D-glucopyranose

β-D-glucopyranose

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

butan-1-ol

methanol

ethanol

propan-1-ol

phytol

(3R)-linalool

(3S)-linalool

myo-inositol

1D-myo-inositol 3-monophosphate

1D-myo-inositol 1-monophosphate

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

6-O-α-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-oleoyl-sn-glycerol 3-phosphate

dioleoyl phosphatidate

trans,octacis-decaprenyl phosphate

di-trans,octa-cis-undecaprenyl phosphate

geranyl diphosphate

geranylgeranyl diphosphate

mono-trans,octa-cis-decaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

apo-4'-lycopenal

3-oxo-24-ethyl-26-al-cholest-4-ene

3-oxo-24-ethyl-cholest-4-en-26-oate

3,24-dioxo-cholest-4-en-26-oate

3-oxo-24-(isopropanoyl)-cholest-4,24-dien-26-oyl-CoA

3-oxo-24-ethyl-cholest-4,24-dien-26-oyl-CoA

3-oxo-24-ethyl-cholest-4-en-26-oyl-CoA

3-oxo-24-ethyl-26-hydroxy-cholest-4-ene

3-oxo-24-ethyl-cholest-4-ene

sitosterol

3-oxo-24-ethyl-cholest-5-ene

di-trans,octa-cis-undecaprenol

3-octaprenyl-4-hydroxybenzoate

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

α-Kdo-(2→6)-lipid IV_A

phlorisovalerophenone

deoxyhumulone

4-prenylphlorisovalerophenone

deoxycohumulone

1-(β-D ribofuranosyl)nicotinamide

maltotriose

maltotetraose

maltopentaose

maltoheptaose

maltohexaose

sucrose

α,α-trehalose

keto-D-fructose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-α-D-mannosamine

N-acetyl-β-D-glucosamine

β-D-fructofuranose

D-xylulose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (S. aureus)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (mycobacteria)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

sucrose 6^F-phosphate

α,α-trehalose 6-phosphate

CMP-3-deoxy-β-D-manno-octulosonate

ADP-α-D-glucose

GDP-α-D-glucose

GDP-α-D-mannuronate

GDP-α-D-mannose

GDP-4-dehydro-α-D-rhamnose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

4-phospho-D-erythronate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-erythrose 4-phosphate

5-phospho-α-D-ribose 1-diphosphate

D-sedoheptulose 7-phosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

D-ribulose 5-phosphate

α-D-ribose-1-phosphate

α-D-galactose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

aldehydo-L-galactonate

L-gulonate

adenylo-succinate

ppGpp

pppGpp

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

5'-deoxyadenosine

5-fluorocytosine

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

cyclic di-3',5'-guanylate

5-hydroxybenzimidazole

5-hydroxybenzimidazole ribotide phosphate