an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

2-pyrone-4,6-dicarboxylate

2-hydroxy-4-carboxymuconate semialdehyde hemiacetal

N²-succinyl-L-arginine

N²-succinyl-L-ornithine

protoanemonin

pseudouridine

L-gulono-1,4-lactone

L-xylo-hex-3-ulono-1,4-lactone

α-D-galacturonate 1-phosphate

5-aminopentanoate

1-piperideine-2-carboxylate

4-oxalocrotonate

ammonia

bisorganyltrisulfane

5-hydroxyindole thiazolidine carboxylate

picolinate

L-dehydro-ascorbate

cyclic-2,3-O-oxalyl-L-threonate

dehydroascorbate (bicyclic form)

cyclic- 3,4-O-oxalyl-L-threonate

2,3-dioxo-L-gulonate

2-carboxy-L-xylonolactone

2-carboxy-L-threo-pentonate

H₂O

2-dehydropantoate

cis-coumarinic acid-β-D-glucoside

scopolin

4-hydroxybenzaldehyde

4-methylumbelliferyl glucoside

hydrogen peroxide

4-hydroxy-2-nonenal

glycerone phosphate

carbon monoxide

3-deoxy-D-manno-octulosonate 8-phosphate

phosphoenolpyruvate

CO₂

coproporphyrinogen III

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

S-formylglutathione

2-phenylethanol

2-methylbutanal

2-methylbutanol

3-methylbutanal

3-methylbutanol

isobutanol

indole-3-glycol aldehyde

indole-3-glycol

3-methoxy-4-hydroxyphenylglycolaldehyde

5-hydroxyindole acetaldehyde

5-hydroxytryptophol

ethanolamine

S-methyl-5'-thioadenosine

S-adenosyl 3-(methylsulfanyl)propylamine

4-guanidinobutyramide

2-aminomalonate semialdehyde

(R)-4'-phosphopantothenate

(R)-4-phosphopantoate

4'-phosphopantetheine

(R)-4'-phosphopantothenoyl-L-cysteine

orotidine 5'-phosphate

N-acetyl-D-muramate 6-phosphate

1,6-anhydro-N-acetyl-β-muramate

(R)-pantothenate

4-methyl-2-oxopentanoate

(S)-3-methyl-2-oxopentanoate

3-methyl-2-oxobutanoate

thiamine diphosphate

2-(α-hydroxyethyl)thiamine diphosphate

N-Formyl-L-kynurenine

(2-hydroxyphenyl)acetate

enol-phenylpyruvate

homogentisate

4-maleyl-acetoacetate

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

4-methylmuconolactone

2-chloro-4-methyl-cis,cis-muconate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

anthranilate

N-(5-phosphoribosyl)-anthranilate

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

pseudouridine 5'-phosphate

acetyl phosphate

6-amino-2-oxohexanoate

5-methylsalicylate

4-methylsalicylate

3-hydroxybenzaldehyde

4-acetamidobutanoate

4-acetamidobutanal

N²-succinylglutamate

N²-succinyl-L-glutamate 5-semialdehyde

6-chloro-2-hydroxy-4-carboxymuconate-6-semialdehyde

4-carboxy-2-hydroxymuconate-6-semialdehyde

D-gluconate 6-phosphate

glycolate

2-phosphoglycolate

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

3-deoxy-D-arabino-heptulosonate 7-phosphate

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

(4-hydroxyphenyl)acetate

2-oxovalerate

3-ethylmalate

(2S)-2-isopropyl-3-oxosuccinate

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

(2S)-2-isopropylmalate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

(R)-2,3-dihydroxy-3-methylpentanoate

N-acetyl-L-glutamate 5-semialdehyde

lipid IV_A

citrate

oxaloacetate

3-dehydroquinate

shikimate 3-phosphate

shikimate

(S)-4-amino-5-oxopentanoate

propionamide

(indol-3-yl)acetamide

4-guanidinobutanoate

acrylate

acrylamide

3-hydroxypropanoate

aminoacetone

lipid X

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

4-phosphooxy-L-threonine

3-dehydroshikimate

quinolinate

β-nicotinate D-ribonucleotide

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

DNA without lesion

2-methyl-trans-aconitate

prenyl diphosphate

(S)-dihydroorotate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

oxalosuccinate

S-methyl-5-thio-α-D-ribose 1-phosphate

nicotinate adenine dinucleotide

isopentenyl diphosphate

N-succinyl-2-amino-6-ketopimelate

(S)-2,3,4,5-tetrahydrodipicolinate

N-succinyl-L,L-2,6-diaminopimelate

2,3-didehydroadipyl-CoA

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

(E)-2-benzylidenesuccinyl-CoA

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

lipid A disaccharide (E. coli)

2-C-methyl-D-erythritol 4-phosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

benzoylsuccinyl-CoA

hydrogenobyrinate a,c-diamide

hydrogenobyrinate

histidinol

histidinal

L-histidinol phosphate

imidazole acetol-phosphate

D-erythro-imidazole-glycerol-phosphate

hydroxypyruvate

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

(S)-5-hydroxyisourate

5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate

5-(methylsulfanyl)-ribulose 1-phosphate

3-phosphooxypyruvate

2-oxopent-4-enoate

(3E)-2-oxopent-3-enoate

(2E)-2-hydroxypenta-2,4-dienoate

2,6-dioxo-6-phenylhexa-3-enoate

chloroacetaldehyde

(S)-4-hydroxy-2-oxopentanoate

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate

(2E)-3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)prop-2-enoate

3-(2,3-dihydroxyphenyl)propanoate

3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)propanoate

phosphonoacetate

γ-butyrobetaine

(2Z,4E)-2-hydroxy-6-oxohexa-2,4-dienoate

(2Z,4E)-2-aminomuconate

(2Z,4E)-2-amino-6-oxohexa-2,4-dienoate

(2E,4Z)-2-hydroxymuconate

(2Z,4E)-2-hydroxy-5-methyl-6-oxohexa-2,4-dienoate

2-hydroxy-6-oxohepta-2,4-dienoate

(2E,4Z)-2-hydroxy-6-oxohepta-2,4-dienoate

4-methylbenzyl alcohol

3-methylbenzaldehyde

3-methylbenzyl alcohol

3-hydroxybenzyl alcohol

3-deoxy-α-D-manno-2-octulosonate

dimethyl sulfoxide

trimethylamine N-oxide

trimethylamine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

prephenate

5-enolpyruvoyl-shikimate 3-phosphate

xanthine

cis-3-phenylcyclohexa-3,5-diene-1,2-diol

carbamoyl phosphate

2-maleylacetate

carbonic acid

2-amino-3-carboxymuconate-6-semialdehyde

3-hydroxyanthranilate

β-D-ribosylnicotinate

cyclohexanone

cyclohexanol

presqualene diphosphate

squalene

prephytoene diphosphate

N-ethylammeline

deethylsimazine

γ-L-glutamyl 5-phosphate

L-canavanine

canavaninosuccinate

L-arginino-succinate

N-acetylglutamyl-phosphate

O-ureido-L-homoserine

2-dehydro-3-deoxy-D-gluconate 6-phosphate

glutathione disulfide

vanillin

4-aminobutanoate

4-(γ-L-glutamylamino)butanoate

α-D-glucopyranosyl-diphosphoundecaprenol

FK-506

31-O-desmethylFK-506

3-oxopropanoate

6-phospho D-glucono-1,5-lactone

4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate

α-D-glucosamine 1-phosphate

2-keto-D-gluconate

β-D-GlcA-(1→2)-α-D-Man-(1→3)-β-D-Glc-(1→4)-α-D-Glc-1-diphospho-ditrans,octacis-undecaprenol

α-D-Man-(1→3)-β-D-Glc-(1→4)-α-D-Glc-1-diphospho-ditrans,octacis-undecaprenol

β-D-glucosyl-(1,4)-α-D-glucosyl-diphosphoundecaprenol

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

acetoacetate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

2-oleoylglycerol

itaconate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

(L-threonylcarbamoyl)adenylate

tropinone

pseudotropine

tropine

N-(2,3-dihydroxybenzoyl)-L-serine trimer

3'-phosphoadenylyl-sulfate

4-fumaryl-acetoacetate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

O-acetyl-L-serine

hydrogen selenide

preuroporphyrinogen

porphobilinogen

methylsalicylate

salicyl alcohol

thiamine phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

5-aminolevulinate

5-amino-6-(D-ribitylamino)uracil

1-deoxy-L-glycero-tetrulose 4-phosphate

dimethylsulfoniopropanoate

D-glucurono-6,3-lactone

propynoate

prop-2-ynal

3,4-dihydroxyphenylacetaldehyde

5-hydroxyindole acetate

4-imidazoleacetate

imidazole acetaldehyde

(indol-3-yl)pyruvate

4-methyl-3-oxoadipate

4-methyl-3-oxoadipate-enol-lactone

urea-1-carboxylate

urea

glutathionylspermidine

8-amino-7-oxononanoate

pimeloyl-CoA

methylamine

octopamine

(R)-synephrine

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

glutathioselenol

selenodiglutathione

H₂

2-hydroxy-5-(methylsulfanyl)-3-oxopent-1-enyl 1-phosphate

1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one

2-iminoacetate

2-dehydro-6-phospho-D-gluconate

N⁵-carboxyaminoimidazole ribonucleotide

N-ethylammelide

adipate

6-oxohexanoate

ε-caprolactone

crotonate

cyclohex-1,5-diene-1-carbonyl-CoA

6-hydroxycyclohex-1-ene-1-carbonyl-CoA

6-oxocyclohex-1-ene-1-carbonyl-CoA

3-hydroxypimeloyl-CoA

3-oxopimeloyl-CoA

cyclohexane-1-carboxylate

cyclohexane-1-carbonyl-CoA

2-hydroxy-6-oxocyclohexane-1-carbonyl-CoA

(S)-ureidoglycolate

5-oxo-L-proline

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

(2E,6E)-farnesyl diphosphate

pristanate

hypoglycin B

L-α-amino-ε-keto-pimelate

L-kynurenine

L-methionine

L-cysteine

L-tryptophan

L-alanine

glycine

L-proline

L-valine

L-leucine

L-isoleucine

L-phenylalanine

L-selenocysteine

L-glutamate

L-serine

L-arginine

L-tyrosine

L-aspartate

L-glutamine

L-threonine

L-cystathionine

L-asparagine

L-lysine

L,L-diaminopimelate

L-histidine

L-ornithine

L-aspartyl-4-phosphate

N^ω-hydroxy-L-arginine

N-carbamoyl-L-aspartate

N-acetyl-L-ornithine

N-acetyl-L-citrulline

L-citrulline

L-4-hydroxyglutamate semialdehyde

S-adenosyl-L-methionine

L-glutamate-5-semialdehyde

S-adenosyl-L-homocysteine

L-homoserine

O-succinyl-L-homoserine

O-phospho-L-homoserine

L-homocysteine

L-aspartate 4-semialdehyde

S-sulfo-L-cysteine

hypoglycin A

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

L-2-amino-3-oxobutanoate

O-acetyl-L-homoserine

3-hydroxy-L-kynurenine

N-acetyl-L-glutamate

3-phospho-L-serine

D-lysine

D-alanine

D-glutamate

β-alanine

(S)-3-amino-2-methylpropanoate

isoguanine

8-oxo-dGTP

8-oxo-GTP

GDP

dGDP

ADP

dADP

ATP

AMP

5'-deoxyadenosine

GTP

IMP

XMP

XTP

dIMP

dITP

GMP

pppGpp

dGTP

dATP

cyclic-AMP

hypoxanthine

dIDP

ITP

IDP

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

adenylo-succinate

2'-deoxyguanosine

2'-deoxyadenosine

dGMP

dAMP

ppGpp

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

ADP-α-D-glucose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-mannose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

CDP-α-D-glucose

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

dTDP-α-D-glucose

UDP-α-D-galacturonate

UDP-α-D-glucose

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-α-D-galactose

UDP-α-D-glucuronate

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

guanine

adenine

uracil

thymine

preQ₁

cyclic di-3',5'-guanylate

dUMP

dTMP

dCMP

dUDP

dCDP

dTDP

dUTP

dCTP

dTTP

UDP

CDP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

CTP

UTP

CMP

UMP

2-hydroxy-dATP

5-hydroxy-CTP

NADP⁺

NAD⁺

NADPH

NADH

2'-deoxyuridine

2'-deoxycytidine

thymidine

guanosine

inosine

xanthosine

adenosine

uridine

cytidine

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

L-gulonate

aldehydo-L-galactonate

D-gluconate

1-(β-D ribofuranosyl)nicotinamide

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

lotaustralin

linamarin

neolinustatin

linustatin

taxiphyllin

5-phospho-α-D-ribose 1-diphosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

4-phospho-D-erythronate

α-D-mannose 1-phosphate

α-D-glucopyranose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

D-fructose 6-phosphate

6-deoxy-5-ketofructose 1-phosphate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

sucrose 6^F-phosphate

α,α-trehalose 6-phosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (mycobacteria)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

β-D-fructofuranose

glycolaldehyde

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

β-D-galactopyranose

α-D-galactopyranose

β-D-glucopyranose

α-D-glucopyranose

D-glyceraldehyde

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-glucosamine

glycerol

β-D-cellobiose

maltotriose

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

α-Kdo-(2→6)-lipid IV_A

4-O-phospho-α-Kdo-(2→6)-lipid IV_A

sucrose

α-maltose

α,α-trehalose

maltopentaose

maltohexaose

maltotetraose

maltoheptaose

aldehydo-D-galacturonate

salicylaldehyde

4-methylumbelliferone

coumarin

scopoletin

all-trans-retinol

all-trans-retinyl palmitate

(3S)-2,3-epoxy-2,3-dihydrosqualene

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

apo-4'-lycopenal

all-trans-phytoene

15-cis-phytoene

apo-4'-lycopenoate

ferric-[N-(2,3-dihydroxybenzoyl)-L-serine trimer] complex

vanillylamine

betanidin quinone

betanidin

(3E)-undec-3-enoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

(3E)-tetradec-3-enoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

2-trans-nonenoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

geranylgeranyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-nonaprenyl diphosphate

3-octaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-decaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

1-oleoyl-2-palmitoyl-phosphatidylglycerol

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

dioleoyl phosphatidate

1-palmitoyl-2-linoleoyl-phosphatidylcholine

1-linoleoyl-sn-glycero-3-phosphocholine

1-oleoyl-2-lyso-glycerone phosphate

1-oleoyl-sn-glycerol 3-phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

trehalose-trans-keto-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

6-O-α-mycolyl-trehalose 6-phosphate

benzyl alcohol

myo-inositol

1D-myo-inositol 2-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 3-monophosphate

1D-myo-inositol 1-monophosphate

3,5-cyclohexadiene-1,2-diol-1-carboxylate

4,6-dichloro-3-methylcatechol

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylglycol

catechol

4-chlorocatechol

4-methylcatechol

protocatechuate

3,4-dihydroxyphenylacetate

biphenyl-2,3-diol

3-sulfocatechol

3-methylcatechol

3,4-dihydroxymandelate

dopamine

1-octanol

ethanol

phytol

propan-1-ol

butan-1-ol

methanol

(2E,6E)-farnesal

methylglyoxal

phenylacetaldehyde

(4-hydroxyphenyl)acetaldehyde

benzaldehyde

4-methylbenzaldehyde

phytenal

(S)-lactaldehyde

formaldehyde

acetaldehyde

isobutanal

1-propanal

1-octanal

butan-1-al

diacetyl

4-hydroxyacetophenone

(1E)-4-oxobut-1-ene-1,2,4-tricarboxylate

2-hydroxy-4-oxobutane-1,2,4-tricarboxylate

pyruvate

glyoxylate

2-oxoglutarate

2-oxobutanoate

4-(methylsulfanyl)-2-oxobutanoate

5-chloro-4-hydroxy-2-oxopentanoate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

salicylate

5-chloroprotocatechuate

trans-cinnamate

4-aminobenzoate

benzoate

3-hydroxybenzoate

4-methylbenzoate

acetate

(R)-pantoate

orotate

allantoate

L-carnitine

5-chloro-5-deoxy-D-ribonate

aldehydo-D-glucuronate

(S)-1-pyrroline-5-carboxylate

leukotriene-E4

leukotriene-D4

stearate

octanoate

palmitate

decanoate

butanoate

linoleate

oleate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

α-linolenate

γ-linolenate

(3E,5Z)-tetradecadienoate

di-homo-γ-linolenate

phytenate

(15Z)-tetracosenoate

(2E,6E)-farnesoate

3-oxoadipate

formate

propanoate

(R)-lactate

(S)-lactate

6-hydroxyhexanoate

(1E,3E)-4-hydroxybuta-1,3-diene-1,2,4-tricarboxylate

(2R,3S)-2-methylisocitrate

(R)-3-hydroxybutanoate

(2S,3S)-2-methylcitrate

cis-2-methylaconitate

cis-aconitate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

3-methyl-cis,cis-muconate

chorismate

(3E)-2-oxohex-3-enedioate

(2Z,4E,7E)-2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioate

D-glucarate

succinate

fumarate

(S)-malate

4-tyrosol

2-[(1R,6S)-1,6-dihydroxycyclohexa-2,4-dien-1-yl]acetyl-coA

urate

biphenyl

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

4-hydroxybenzoate

2-nitrobenzoate

2-hydroxylaminobenzoate

coumarinate

2,3-dihydroxy-trans-cinnamate

3-hydroxy-trans-cinnamate

6,7-dehydrobaicalein

baicalein

(1R,2S)-4,6-dichloro-3-methylcyclohexa-3,5-diene-1,2-diol

2,4-dichlorotoluene

5-chlorosalicylate

4-chlorosalicylate

3-chlorobenzaldehyde

3-chlorobenzyl alcohol

2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

tyramine

S-1-(4-hydroxyphenyl)-ethanol

2-[hydroperoxy(4-hydroxyphenyl)methyl]-6-hydroxy-1-benzofuran-3-one

6-hydroxy-2-[hydroxy-(4-hydroxyphenyl)methyl]-1-benzofuran-3-one

6-hydroxy-2-(6-oxo-1-oxaspiro[2.5]octa-4,7-dien-2-yl)-1-benzofuran-3-one

phenol

4-methylphenol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-heptaprenyl-1,4-benzoquinol

all trans-decaprenyl-2-methoxy-6-1,4-benzoquinol

2-methoxy-6-all trans-nonaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-heptaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-nonaprenyl-1,4-benzoquinol

3-demethylubiquinol-8

3-demethylubiquinol-7

3-demethylubiquinol-10

3-demethylubiquinol-9

demethylmenaquinol-8

menaquinol-8

ubiquinol-8

ubiquinol-7

ubiquinol-10

ubiquinol-9

(indol-3-yl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

3-methoxy-4-hydroxyphenylglycol

vanillyl mandelate

hydrogen cyanide

preQ₀

(indole-3-yl)acetonitrile

acrylonitrile

(2R)-2-hydroxy-2-methylbutanenitrile

2-hydroxy-2-methylpropanenitrile

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydromonapterin

7,8-dihydroneopterin

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydroneopterin 2',3'-cyclic phosphate

7,8-dihydroneopterin 3'-phosphate

7,8-dihydropteroate

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

FMN

FAD

riboflavin

FMNH₂

FADH₂

reduced riboflavin

6,7-dimethyl-8-(1-D-ribityl)lumazine

cobyrinate

sirohydrochlorin

precorrin-1

precorrin-2

cobalt-precorrin-5A

cobalt-precorrin-4

cobalt-precorrin-6A

cobalt-precorrin-5B

cobalt-precorrin-6B

cobalt-precorrin-8

cobalt-precorrin-7

cobalt-precorrin-3

nicotinate

nicotinamide

thiamine

L-ascorbate

pyridoxal 5'-phosphate

pyridoxine 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxine

pyridoxal

pyridoxamine

coenzyme A

(R)-NADHX

(S)-NADHX

D-glucono-1,5-lactone

3-chloro-2-methyl-dienelactone

2-chloro-5-methyl-dienelactone

3,5-dichloro-2-methyl-muconolactone

5-chloro-3-methyl-cis-dienelactone

cis-dienelactone

trans-dienelactone

L-galactono-1,4-lactone

acetyl-CoA

isobutanoyl-CoA

succinyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

malonyl-CoA

4-hydroxybenzoyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

3-hydroxypropanoyl-CoA

acryloyl-CoA

(3S)-hydroxyadipyl-CoA

(E)-2-methylcrotonoyl-CoA

3-hydroxyisovaleryl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

(2E,5Z)-tetradecenoyl-CoA

methylacrylyl-CoA

2-methylacetoacetyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

L-carnitinyl-CoA

γ-butyrobetainyl-CoA

glutaryl-CoA

(E)-glutaconyl-CoA

(+)-7-epi-jasmonoyl-CoA

3'-dephospho-CoA

dihomo γ-linolenoyl-CoA

itaconyl-CoA

3-methylcrotonyl-CoA

isovaleryl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

phenylacetyl-CoA

crotonobetainyl-CoA

2-methylbutanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

3-oxoadipyl-CoA

3-oxooctadecanoyl-CoA

3-oxo-palmitoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxooctanoyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

hexadecanedioyl-CoA

palmitoyl-CoA

stearoyl-CoA

pristanoyl-CoA

2-hydroxyphytanoyl-CoA

phytanoyl-CoA

decanoyl-CoA

octanoyl-CoA

propanoyl-CoA

butanoyl-CoA

(Z)-15-tetracosenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(3R)-3-hydroxypentanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

phytenoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-octadec-2-enoyl-CoA

crotonyl-CoA

ethene

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

phenylacetate

(+)-7-epi-jasmonate

(25S)-3-oxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

(S)-(+)-allantoin

acetamide

bromochloromethane

3-chloro-2-methyl-maleylacetate

2-chloro-5-methyl-maleylacetate

3-chloro-cis,cis-muconate

3,5-dichloro-2-methyl-muconate

2-chloroacetate

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

agmatine

spermidine

putrescine

cadaverine

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

2-iminopropanoate

4-[(E)-2-(methylamino)ethenyl]phenol

4-[(Z)-2-aminoethenyl]phenol

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

thiosulfate

OH^-

hydrogensulfite

hydrogencarbonate

molybdate

superoxide

phosphate

diphosphate

triphosphate

chloride

bromide

Fe³⁺

ammonium

H⁺

Na⁺

Co²⁺

Cd²⁺

Fe²⁺

Cu²⁺

Mg²⁺

S-(hydroxymethyl)glutathione

3-(methylsulfanyl)propanal

methionol

dimethyl sulfide

3-dimethylsulfoniopropionaldehyde

glutathione

(R)-S-lactoylglutathione

3-sulfopyruvate

L-cysteate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

thiocyanate

methanethiol

S-sulfanylglutathione

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

monodehydroascorbate radical

nitric oxide

hydroxyl radical

cyanophycin primer

cyanophycin primer-L-aspartate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-cysteinylglycine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

2-methoxy-6-(all-trans-nonaprenyl)phenol

6-(all-trans-decaprenyl)-2-methoxy-phenol

2-methoxy-6-(all-trans-heptaprenyl)phenol

2-methoxy-6-(all-trans-octaprenyl)phenol

2-octaprenylphenol

2-heptaprenylphenol

2-decaprenylphenol

2-nonaprenylphenol

(S)-3-hydroxy-isobutanoate

3-(all-trans-nonaprenyl)benzene-1,2-diol

3-(all-trans-decaprenyl)benzene-1,2-diol

3-(all-trans-heptaprenyl)benzene-1,2-diol

3-(all-trans-octaprenyl)benzene-1,2-diol

5,10-methenyltetrahydrofolate mono-L-glutamate

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

(S)-ureidoglycine

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

2,3-diphospho-D-glycerate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

sn-glycerol 3-phosphate

S⁰

oxygen

hydrogen sulfide

protoporphyrinogen IX

uroporphyrinogen-III

coproporphyrinogen I

uroporphyrinogen-I

protoporphyrin IX

(Z,Z)-biliverdin-IX α

siroheme

protoheme

cob(II)yrinate a,c-diamide

cob(II)yrinate c-monoamide

cobalt-sirohydrochlorin

cobalt-factor III

ethylphosphate

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal

2-iminobutanoate

4-[(2Z)-2-(methylimino)ethyl]phenol

4-(2-iminoethyl)phenol

2-iminosuccinate