an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

5-hydroxyindole thiazolidine carboxylate

4-oxoglutaramate

1-piperideine-2-carboxylate

1-piperideine 6-carboxylate

5-aminopentanoate

octadecanal

selenodiglutathione

glutathioselenol

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

2-amino-3-carboxymuconate-6-semialdehyde

4-amino-2-methyl-5-pyrimidinemethanol

N²-succinyl-L-ornithine

N²-succinyl-L-arginine

L-histidinol phosphate

hydroxypyruvate

(S)-ureidoglycolate

N-carbamoyl-2-oxoglycine

oxamate

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

3-oxo-5,6-didehydrosuberyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

N⁵-carboxyaminoimidazole ribonucleotide

5-oxo-L-proline

5-amino-6-(5-phospho-D-ribitylamino)uracil

3'-ketosucrose

pyruvic oxime

5-dehydro-2-deoxy-D-gluconate

5-dehydro-2-deoxy-D-gluconate 6-phosphate

7-epicholate

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

carbon monoxide

4-aminobutanoate

acetoacetate

3-hydroxypropanoate

N-(5-phosphoribosyl)-anthranilate

5-hydroxytryptophol

5-hydroxyindole acetaldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

indole-3-glycol

indole-3-glycol aldehyde

isobutanol

3-methylbutanol

3-methylbutanal

2-methylbutanol

2-methylbutanal

2-phenylethanol

propanoyl phosphate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

formamide

3-oxopropanoate

diethylthiophosphate

dimethylthiophosphate

diethylphosphate

arsenite

H₂

carbonic acid

hydroxylamine

phthalate

2,2'-disulfonyl azobenzene

3-[(4-amino-6-chloro-1,3,5-triazin-2-yl)amino]benzenesulfonate

methylamine

N-ethylglycine

ethylamine

2-iminoacetate

6-amino-2-oxohexanoate

2-hydroxy-5-carboxymethylmuconate semialdehyde

5-carboxymethyl-2-hydroxymuconate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(4S)-4-hydroxy-2-oxoheptanedioate

(4-hydroxyphenyl)acetate

2-dehydropantoate

L-tartrate

meso-tartrate

2-hydroxy-3-oxosuccinate

succinate semialdehyde

2-oleoylglycerol

methylsalicylate

2-(α-hydroxyethyl)thiamine diphosphate

(E)-2-benzylidenesuccinyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-phosphoglycolate

glycolate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

M_LPS

core oligosaccharide-lipid A (E. coli K-12 core type)

1,4-dihydroxy-2-naphthoate

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

N-acetyl-β-D-mannosaminuronyl-(1→4)-N-acetyl-α-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol

(enterobacterial common antigen)-undecaprenyl diphosphate

dimethyl sulfoxide

dihydroxyacetone

1-deoxy-L-glycero-tetrulose 4-phosphate

2-C-methyl-D-erythritol 4-phosphate

salicyl alcohol

D-glycero-β-D-manno-heptose 1,7-bisphosphate

D-glycero-β-D-manno-heptose 1-phosphate

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

itaconate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

(S)-2-amino-6-oxohexanoate

pimeloyl-CoA

8-amino-7-oxononanoate

3-mercaptopyruvate

chloramphenicol

histidinal

histidinol

lipid IV_A

3-β-hydroxyandrost-5-en-17-one 3-sulfate

estrone 3-sulfate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

(R)-3-(phenyl)lactoyl-CoA

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

DNA without lesion

nigerose

2-deoxy-D-glucose 6-phosphate

2-deoxy-D-glucose

4-deoxy-4-formamido-α-L-arabinopyranosyl ditrans,octacis-undecaprenyl phosphate

UDP-4-deoxy-4-formamido-β-L-arabinopyranose

4-amino-4-deoxy-α-L-arabinopyranosyl ditrans,octacis-undecaprenyl phosphate

(lipoyl)adenylate

N-acetyl-D-muramate 6-phosphate

N²-succinyl-L-glutamate 5-semialdehyde

N²-succinylglutamate

4-acetamidobutanal

4-acetamidobutanoate

6-phospho D-glucono-1,5-lactone

2-keto-L-gulonate

5-dehydro-D-gluconate

2,5-didehydro-D-gluconate

N,N-dimethyl-1,4-phenylenediamine

S-formylglutathione

4-hydroxy-2-nonenal

N-ethylmaleimide

N-ethylsuccinimide

anthranilate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

oxalosuccinate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

1,6-anhydro-N-acetyl-β-muramate

2-succinylbenzoate

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

1,4-dihydroxy-2-naphthoyl-CoA

isochorismate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

acetyl phosphate

2,3-didehydroadipyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

(E)-4-coumaroyl-CoA

hydrogen selenide

coproporphyrinogen III

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

dihydrolipoamide

S-acetyldihydrolipoamide

quinolinate

(2S)-2-isopropyl-3-oxosuccinate

3-ethylmalate

2-oxovalerate

(2S)-2-isopropylmalate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

urea

ammonia

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

5-aminolevulinate

β-D-ribosylnicotinate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

adenosine 3',5'-bisphosphate

3'-phosphoadenylyl-sulfate

prephenate

S-ribosyl-L-homocysteine

autoinducer 2

γ-L-glutamyl 5-phosphate

thiamine diphosphate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribosylamino)uracil

L-selenocystathionine

isopentenyl diphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

xanthine

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

2-dehydro-3-deoxy-D-gluconate 6-phosphate

5-phospho-β-D-ribosylamine

N¹-(5-phospho-β-D-ribosyl)glycinamide

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

N-succinyl-L,L-2,6-diaminopimelate

4-amino-4-deoxychorismate

glutathione disulfide

2-dehydro-3-deoxy-D-gluconate

oxalate

selenophosphate

orotidine 5'-phosphate

(R)-4'-phosphopantothenoyl-L-cysteine

4'-phosphopantetheine

ADP-D-glycero-β-D-manno-heptose

ADP-L-glycero-β-D-manno-heptose

aminoacetone

O-acetyl-L-serine

N-acetyl-L-glutamate 5-semialdehyde

N-acetylglutamyl-phosphate

O-ureido-L-homoserine

canavaninosuccinate

L-canavanine

L-arginino-succinate

(R)-pantothenate

(R)-4'-phosphopantothenate

shikimate

3-methyl-2-oxobutanoate

4-methyl-2-oxopentanoate

(S)-3-methyl-2-oxopentanoate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

hydrogen peroxide

porphobilinogen

preuroporphyrinogen

prenyl diphosphate

α-D-glucosamine 1-phosphate

carbamoyl phosphate

ethanolamine

glycerone phosphate

4-imidazolone-5-propanoate

urocanate

3-dehydroquinate

3-dehydroshikimate

3-deoxy-α-D-manno-2-octulosonate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

(S)-2,3,4,5-tetrahydrodipicolinate

N-succinyl-2-amino-6-ketopimelate

lipid X

lipid A disaccharide (E. coli)

β-nicotinate D-ribonucleotide

nicotinate adenine dinucleotide

citrate

7,8-diaminopelargonate

dethiobiotin

D-gluconate 6-phosphate

CO₂

D-erythro-imidazole-glycerol-phosphate

imidazole acetol-phosphate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-phosphooxy-L-threonine

3-phosphooxypyruvate

shikimate 3-phosphate

5-enolpyruvoyl-shikimate 3-phosphate

thiamine phosphate

enol-phenylpyruvate

propionamide

(indol-3-yl)acetamide

acrylamide

acrylate

4-guanidinobutyramide

4-guanidinobutanoate

(S)-dihydroorotate

oxaloacetate

3-deoxy-D-arabino-heptulosonate 7-phosphate

5-amino-6-(D-ribitylamino)uracil

(S)-4-amino-5-oxopentanoate

3-deoxy-D-manno-octulosonate 8-phosphate

phosphoenolpyruvate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

H₂O

(2E,6E)-farnesyl diphosphate

pristanate

L-α-amino-ε-keto-pimelate

L-citrulline

L-methionine

L-histidine

glycine

L-isoleucine

L-valine

L-lysine

L-tryptophan

L-proline

L-leucine

L-glutamine

L-serine

L-glutamate

L-threonine

L-phenylalanine

L-alanine

L-tyrosine

L-asparagine

L-arginine

L-aspartate

L-cysteine

L-4-hydroxyglutamate semialdehyde

3-sulfino-L-alanine

S-sulfo-L-cysteine

L-glutamate-5-semialdehyde

O-phospho-L-homoserine

L-homocysteine

L-homoserine

L-aspartate 4-semialdehyde

O-succinyl-L-homoserine

L-ornithine

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

meso-diaminopimelate

L-selenocysteine

L-isoglutamine

L,L-diaminopimelate

L-cystathionine

L-aspartyl-4-phosphate

formyl-L-isoglutamine

N-formyl-L-glutamate

N-formimino-L-glutamate

N-acetyl-L-citrulline

N-acetyl-L-ornithine

N-carbamoyl-L-aspartate

β-alanine

(S)-3-amino-2-methylpropanoate

D-glutamate

D-lysine

cis-4-hydroxy-D-proline

D-alanine

D-cysteine

D-methionine

D-nopaline

seleno-L-homocysteine

L-selenomethionine

L-2-amino-3-oxobutanoate

3-phospho-L-serine

sarcosine

N-acetyl-L-methionine

N-acetyl-L-glutamate

trans-4-hydroxy-L-proline

O-acetyl-L-homoserine

(R)-3-(phenyl)lactate

4-methylphenol

2-iminosuccinate

2-iminopropanoate

2-iminobutanoate

cyanophycin primer-L-aspartate

cyanophycin primer

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-cysteinylglycine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

(glutathion-S-yl)-4-hydroxy-2-nonenal

a mismatched DNA base pair

a properly matched DNA base pair

DNA with lesion

phenylacetate

ethylphosphate

phosphonoacetaldehyde

adenosylcobalamin

cob(I)alamin

cob(II)yrinate c-monoamide

cob(II)yrinate a,c-diamide

cobalt-factor III

cobalt-precorrin-3

cobalt-sirohydrochlorin

cobalt-precorrin-7

cobalt-precorrin-8

cobalt-precorrin-6B

cobalt-precorrin-5B

cobalt-precorrin-6A

cobalt-precorrin-4

cobalt-precorrin-5A

cobyrinate

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)inamide

adenosylcobinamide

hemin

protoheme

hydrogen cyanide

uroporphyrinogen-I

coproporphyrinogen I

uroporphyrinogen-III

protoporphyrinogen IX

protoporphyrin IX

siroheme

S⁰

oxygen

hydrogen sulfide

sn-glycerol 3-phosphate

(R)-glycerate

2,3-diphospho-D-glycerate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

Reactive Blue 5

4-dimethylaminophenylazobenzene

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(S)-ureidoglycine

1-oleoyl-2-lyso-glycerone phosphate

dTDP-4-amino-4,6-dideoxy-α-D-galactose

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

5,10-methenyltetrahydrofolate mono-L-glutamate

3-(all-trans-octaprenyl)benzene-1,2-diol

(S)-3-hydroxy-isobutanoate

2-octaprenylphenol

2-methoxy-6-(all-trans-octaprenyl)phenol

superoxide

parathion

paraoxon

4-nitrophenol

chloramphenicol 3-acetate

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

S-(hydroxymethyl)glutathione

methionol

3-(methylsulfanyl)propanal

dimethyl sulfide

glutathione

thiocyanate

methanethiol

S-sulfanylglutathione

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

5-(2-hydroxyethyl)-4-methylthiazole

4-methyl-5-(2-phosphooxyethyl)thiazole

methanesulfonate

1-butanesulfonate

isethionate

3-(N-morpholino)propanesulfonate

(R)-S-lactoylglutathione

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

selenide

thiosulfate

nitrite

nitrate

hydrogensulfite

hydrogencarbonate

molybdate

tetrathionate

chloride

phosphate

triphosphate

diphosphate

Cr⁶⁺

Cr³⁺

ammonium

H⁺

K⁺

Cu⁺

Zn²⁺

Mg²⁺

Mo²⁺

Cd²⁺

Fe²⁺

Cu²⁺

Co²⁺

glycine betaine

betaine aldehyde

choline

betaine aldehyde hydrate

aniline

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

agmatine

N¹-acetylspermidine

N-acetylputrescine

N¹-acetylspermine

spermidine

spermine

cadaverine

putrescine

sn-glycero-3-phosphocholine

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

1-oleoyl-2-palmitoyl-phosphatidylglycerol

fluoroacetaldehyde

fluoroacetate

5'-deoxy-5'-fluoroadenosine

5-fluoro-5-deoxy-D-ribose 1-phosphate

5-chloro-5-deoxy-D-ribonate

5-chloro-4-hydroxy-2-oxopentanoate

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

allantoate

acetamide

(S)-(+)-allantoin

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

nicotinamide

heptadecane

3α,7α,12β-trihydroxy-5β-cholan-24-oate

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

3-oxo-4-pregnene-20-carboxyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

estrone

3-dehydrocholate

isocholate

glycocholate

cholate

3-β-hydroxyandrost-5-en-17-one

(+)-7-epi-jasmonate

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

2-methylbutanoyl-CoA

2-methylacetoacetyl-CoA

isobutanoyl-CoA

acryloyl-CoA

(2E,5Z)-tetradecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

phenylacetyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E)-tetradec-3-enoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3E)-undec-3-enoyl-CoA

itaconyl-CoA

dihomo γ-linolenoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

3-hydroxyisovaleryl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

methylacrylyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3E)-dec-3-enoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

2-trans-nonenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

4-trans-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

4-cis-undecenoyl-CoA

4-hydroxybenzoyl-CoA

(+)-7-epi-jasmonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

formyl-CoA

oxalyl-CoA

3'-dephospho-CoA

malonyl-CoA

acetyl-CoA

succinyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

crotonyl-CoA

phytenoyl-CoA

(2E)-octadec-2-enoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

(E)-cinnamoyl-CoA

(S)-malyl-CoA

(3Z)-dodec-3-enoyl-CoA

oleoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(Z)-15-tetracosenoyl-CoA

propanoyl-CoA

butanoyl-CoA

hexanoyl-CoA

lauroyl-CoA

decanoyl-CoA

octanoyl-CoA

stearoyl-CoA

palmitoyl-CoA

pristanoyl-CoA

hexadecanedioyl-CoA

3-oxoadipyl-CoA

acetoacetyl-CoA

3-oxooctanoyl-CoA

3-oxododecanoyl-CoA

3-oxodecanoyl-CoA

3-oxohexanoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-myristoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

all-trans-retinyl palmitate

D-glucono-1,5-lactone

FMNH₂

FMN

FAD

FADH₂

(S)-NADHX

(R)-NADHX

NADPH

NADH

NAD⁺

NADP⁺

caldariellaquinol

ubiquinol-8

menaquinol-8

demethylmenaquinol-8

3-demethylubiquinol-8

caldariellaquinone

(R)-lipoate

coenzyme A

7,8-dihydrofolate monoglutamate

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

nicotinate

thiamine

riboflavin

pyridoxal

pyridoxal 5'-phosphate

pyridoxamine

pyridoxamine 5'-phosphate

pyridoxine

pyridoxine 5'-phosphate

menadione

all-trans-retinol

(S)-1-pyrroline-5-carboxylate

precorrin-1

precorrin-2

sirohydrochlorin

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

7,8-dihydroneopterin 3'-phosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydromonapterin

7,8-dihydroneopterin

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydropteroate

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

guanine

adenine

2'-deoxyinosine

2'-deoxyguanosine

2'-deoxyadenosine

xanthosine

inosine

adenosine

guanosine

hypoxanthine

dIMP

dGMP

dAMP

dITP

dGTP

dATP

dIDP

dGDP

dADP

IDP

GDP

ADP

XMP

GMP

IMP

AMP

XTP

ITP

GTP

ATP

cytidine 2',3'-cyclic monophosphate

uridine 2'3'-cyclic monophosphate

dTDP

dTTP

uracil

uridine 3'-monophosphate

cytidine-3'-monophosphate

dUMP

dTMP

dUDP

CTP

UTP

dCTP

dUTP

dCMP

dCDP

UDP

CDP

orotate

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-mannosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-β-L-threo-pentapyranos-4-ulose

UDP-4-amino-4-deoxy-β-L-arabinopyranose

UDP-α-D-glucose

UDP-α-D-galactose

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-α-D-glucose

dTDP-4-acetamido-4,6-dideoxy-α-D-galactose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

uridine

cytidine

thymidine

2'-deoxycytidine

2'-deoxyuridine

thymine

UMP

CMP

preQ₁

acrylonitrile

(indole-3-yl)acetonitrile

preQ₀

salicylaldehyde

urate

4-tyrosol

4-hydroxybenzoate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

2-[(1R,6S)-1,6-dihydroxycyclohexa-2,4-dien-1-yl]acetyl-coA

3-methoxy-4-hydroxyphenylglycol

amino-parathion

methyl parathion

benzaldehyde

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

hydroquinone

menadiol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

4-aminophenol

2,3-dihydroxybenzoate

3,4-dihydroxyphenylglycol

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylacetate

salicylate

trans-cinnamate

4-aminobenzoate

benzoate

chorismate

fumarate

succinate

(S)-malate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

(2R,3S)-2-methylisocitrate

(2S,3S)-2-methylcitrate

cis-2-methylaconitate

cis-aconitate

D-threo-isocitrate

(S)-lactate

(R)-lactate

pyruvate

acetate

formate

propanoate

butanoate

decanoate

octanoate

1-palmitoyl-2-linoleoyl-phosphatidylcholine

1-linoleoyl-sn-glycero-3-phosphocholine

(15Z)-tetracosenoate

oleate

(3E,5Z)-tetradecadienoate

apo-4'-lycopenoate

di-homo-γ-linolenate

linoleate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

α-linolenate

phytenate

stearate

palmitate

(R)-pantoate

D-gluconate

D-mannonate

5-deoxy-D-glucuronate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

2-oxobutanoate

4-(methylsulfanyl)-2-oxobutanoate

2-oxoglutarate

glyoxylate

a coenzyme-A group

methylglyoxal

diacetyl

3-(N-morpholino)propanal

glycolaldehyde

1-propanal

isobutanal

butan-1-al

formaldehyde

1-octanal

acetaldehyde

(S)-lactaldehyde

phytenal

D-glyceraldehyde

α-D-glucopyranose

β-D-glucopyranose

α-D-galactopyranose

β-D-galactopyranose

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

butan-1-ol

propan-1-ol

ethanol

methanol

phytol

glycerol

D-arabinitol

D-ribitol

1D-chiro-inositol

scyllo-inositol

myo-inositol

1-keto-D-chiro-inositol

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

scyllo-inosose

D-myo-inositol (1,4,5)-trisphosphate

D-myo-inositol (1,3,4)-trisphosphate

D-myo-inositol (1,3,4,5)-tetrakisphosphate

D-myo-inositol (1,4,5,6)-tetrakisphosphate

D-myo-inositol 1,3,4,5,6-pentakisphosphate

D-myo-inositol (1,4)-bisphosphate

1D-myo-inositol 3-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 2-monophosphate

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-palmitoyl-sn-glycero-3-phosphocholine

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-oleoyl-sn-glycerol 3-phosphate

1,2-dipalmitoyl-sn-glycero-3-phosphocholine

dioleoyl phosphatidate

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

1-18:1-2-18:1-phosphatidylethanolamine

trans,octacis-decaprenyl phosphate

di-trans,octa-cis-undecaprenyl phosphate

geranyl diphosphate

all-trans-octaprenyl diphosphate

mono-trans,octa-cis-decaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

apo-4'-lycopenal

3-octaprenyl-4-hydroxybenzoate

galactosyl-glucosyl-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

glucosyl-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

glucosyl-(heptosyl)₃-Kdo₂-lipid A-phosphate

glucosyl-(heptosyl)₂-Kdo₂-lipid A

glucosyl-(heptosyl)₂-Kdo₂-lipid A-phosphate

galactosyl-(glucosyl)₂-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

galactosyl-(glucosyl)₃-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

α-Kdo-(2→6)-lipid IV_A

heptosyl-Kdo₂-lipid A

(heptosyl)₂-Kdo₂-lipid A

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

4'-α-L-Ara4N-α-Kdo-(2→4)-α-Kdo-(2→6)-[P4'-α-L-ara4N]-lipid A

α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A

ferric-enterobactin complex

1-(β-D ribofuranosyl)nicotinamide

maltotriose

maltotetraose

maltopentaose

maltoheptaose

maltohexaose

sucrose

colanic acid

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-α-D-mannosamine

N-acetyl-β-D-glucosamine

β-D-fructofuranose

L-xylulose

D-xylulose

D-ribulose

3-dehydro-D-glucopyranose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

a peptidoglycan dimer (mycobacteria)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

D-ribulose-1,5-bisphosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

N,N'-diacetylchitobiose 6'-phosphate

sucrose 6^G-phosphate

sucrose 6^F-phosphate

N-monoacetylchitobiose 6'-phosphate

β-D-cellobiose 6'-phosphate

CMP-3-deoxy-β-D-manno-octulosonate

ADP-α-D-glucose

GDP-α-D-mannose

GDP-4-dehydro-α-D-rhamnose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

4-phospho-D-erythronate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

5-phospho-α-D-ribose 1-diphosphate

D-tagatofuranose 1,6-bisphosphate

β-D-fructose 1,6-bisphosphate

arbutin-6-phosphate

salicin 6-phosphate

D-fructose 6-phosphate

D-tagatofuranose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

L-xylulose 5-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

α-D-galactose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

methyl β-D-glucoside 6-phosphate

adenosine 2',3'-cyclic monophosphate

guanosine 2',3'-cyclic monophosphate

pppGpp

ppGpp

cyclic-AMP

adenylo-succinate

adenosine 3'-monophosphate

guanosine 3'-monophosphate

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

5'-deoxyadenosine

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

5-hydroxy-CTP

5-hydroxy-CMP

reduced β-nicotinamide D-ribonucleotide

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA