an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

3-deoxy-D-arabino-heptulosonate 7-phosphate

(S)-5-hydroxyisourate

(R)-mevalonate

5-oxo-L-proline

chloroacetaldehyde

(R)-2,3-dihydroxy-3-methylpentanoate

shikimate

orotidine 5'-phosphate

5-(methylsulfanyl)-α-D-ribose

dethiobiotin

coproporphyrinogen III

mesaconate

γ-L-glutamyl 5-phosphate

L-arginino-succinate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

CDP-N-methylethanolamine

D-gluconate 6-phosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

(S)-4-amino-5-oxopentanoate

3-dehydroquinate

S-methyl-5-thio-α-D-ribose 1-phosphate

(R)-4'-phosphopantothenoyl-L-cysteine

acetyl phosphate

(S)-2,3-dihydrodipicolinate

1,4-dihydroxy-2-naphthoate

dihydrolipoamide

selenophosphate

N¹-(5-phospho-β-D-ribosyl)glycinamide

3-oxopropanoate

isopentenyl diphosphate

ethanolamine

(S)-ureidoglycolate

4'-phosphopantetheine

N-methylethanolamine phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

5-(methylsulfanyl)-ribulose 1-phosphate

N-acetylglutamyl-phosphate

1,4-dihydroxy-2-naphthoyl-CoA

(R)-mevalonate diphosphate

lipoamide

N-dimethylethanolamine

L-histidinol phosphate

hexulose 6-phosphate

urea-1-carboxylate

(R)-4'-phosphopantothenate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

xanthine

thiamine phosphate

(S)-2-aceto-2-hydroxybutanoate

imidazole acetol-phosphate

S-methyl-5'-thioadenosine

N-succinyl-L,L-2,6-diaminopimelate

α-D-ribose 1,5-bisphosphate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

D-erythro-imidazole-glycerol-phosphate

N-acetyl-L-glutamate 5-semialdehyde

4-prenylphlorisobutyrophenone

CO₂

prenyl diphosphate

CDP-N-dimethylethanolamine

histidinal

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

N-dimethylethanolamine phosphate

phosphoenolpyruvate

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

4-amino-2-methyl-5-pyrimidinemethanol

1,2-dichloroethane

quinolinate

pimeloyl-CoA

3-dehydroshikimate

α-D-glucosamine 1-phosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

N-succinyl-2-amino-6-ketopimelate

arsenite

N-carbamoyl-2-oxoglycine

β-nicotinate D-ribonucleotide

carbamoyl phosphate

histidinol

5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate

N-monomethylethanolamine

(S)-2,3,4,5-tetrahydrodipicolinate

hydrogen selenide

urea

S-adenosyl 3-(methylsulfanyl)propylamine

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

hydroxypyruvate

9-mercaptodethiobiotin

N-carbamoylputrescine

thiamine diphosphate

shikimate 3-phosphate

5-enolpyruvoyl-shikimate 3-phosphate

3-hydroxypropanoate

(S)-5-amino-3-oxohexanoate

tartronate semialdehyde

acetoacetate

anthranilate

2-chloroethanol

2-phosphoglycolate

8-amino-7-oxononanoate

N-(5-phosphoribosyl)-anthranilate

nicotinate adenine dinucleotide

(3S,5S)-3,5-diaminohexanoate

prephenate

O-phosphoethanolamine

2-succinylbenzoate

5-aminolevulinate

glycolate

N-tetradecanoylglycyl-peptide

pseudouridine 5'-phosphate

(R)-pantothenate

2-iminoacetate

succinate semialdehyde

H₂

citrate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

glycerone phosphate

glutathione disulfide

oxaloacetate

(R)-5-phosphomevalonate

ammonia

hydrogen peroxide

isochorismate

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

L-dehydro-ascorbate

porphobilinogen

2-C-methyl-D-erythritol 4-phosphate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

6-phospho D-glucono-1,5-lactone

4-amino-4-deoxychorismate

L-canavanine

H₂O

phosphocholine

2-hydroxy-5-(methylsulfanyl)-3-oxopent-1-enyl 1-phosphate

7,8-diaminopelargonate

oxamate

5-phospho-β-D-ribosylamine

1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one

preuroporphyrinogen

butanoyl phosphate

glycyl-peptide

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

L-β-lysine

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

(S)-dihydroorotate

(S)-3-methyl-2-oxopentanoate

N⁵-carboxyaminoimidazole ribonucleotide

4-aminobutanoate

adenine

guanine

AMP

XMP

IMP

GMP

GTP

ATP

GDP

ADP

dGTP

dATP

dGMP

dGDP

dADP

hypoxanthine

adenosine

xanthosine

guanosine

inosine

FADH₂

FAD

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydroneopterin

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydroneopterin 3'-phosphate

7,8-dihydropteroate

7,8-dihydrofolate monoglutamate

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

tetrahydrofolate-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

dCTP

UTP

dTMP

dUDP

cytosine

dTTP

CDP

CDP-choline

orotate

dUTP

UDP

uracil

CTP

dCDP

CDP-ethanolamine

dTDP

dUMP

UDP-N-acetyl-α-D-glucosamine

UMP

CMP

uridine

cytidine

2'-deoxycytidine

2'-deoxyuridine

thymidine

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

(S)-1-pyrroline-5-carboxylate

(2E,6E)-farnesyl diphosphate

2-chloroacetate

glutathione

(R)-S-lactoylglutathione

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

(E)-glutaconyl-CoA

succinyl-CoA

glutaryl-CoA

vinylacetyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

acetyl-CoA

(R)-2-hydroxyglutaryl-CoA

malonyl-CoA

3'-dephospho-CoA

4-hydroxybutanoyl-CoA

acryloyl-CoA

(S)-3-aminobutanoyl-CoA

isovaleryl-CoA

3-hydroxypropanoyl-CoA

isobutanoyl-CoA

(S)-malyl-CoA

myristoyl-CoA

butanoyl-CoA

propanoyl-CoA

octanoyl-CoA

acetoacetyl-CoA

(3R)-3-hydroxybutanoyl-CoA

crotonyl-CoA

L-galactono-1,4-lactone

ethene

2-methoxy-6-(all-trans-octaprenyl)phenol

protoporphyrinogen IX

uroporphyrinogen-III

protoporphyrin IX

protoheme

ubiquinone-8

methylglyoxal

glycolaldehyde

α-D-galactopyranose

α-D-glucopyranose

β-D-glucopyranose

β-L-galactopyranose

formaldehyde

acetaldehyde

1-octanal

geranyl diphosphate

all-trans-octaprenyl diphosphate

3-octaprenyl-4-hydroxybenzoate

2-octaprenylphenol

2-iminosuccinate

coenzyme A

L-homocysteine

4-methylphenol

L-glutamate

L-histidine

L-arginine

L-lysine

L-serine

L-aspartate

glycine

L-threonine

L-tyrosine

L-glutamine

L-cysteine

L-phenylalanine

L-tryptophan

L-leucine

L-alanine

L-proline

β-alanine

L-aspartyl-4-phosphate

N-acetyl-L-ornithine

N-acetyl-L-glutamate

N-formyl-L-methionine

N-carbamoyl-L-aspartate

(2S, 3S)-3-methylaspartate

L-citrulline

L-isoleucine

L-homoserine

O-succinyl-L-homoserine

L-canaline

L-ornithine

S-adenosyl-L-homocysteine

1-aminocyclopropane-1-carboxylate

S-adenosyl-L-methionine

L-glutamate-5-semialdehyde

L-aspartate 4-semialdehyde

O-phospho-L-homoserine

meso-diaminopimelate

L-methionine

L-cystathionine

L,L-diaminopimelate

sn-glycerol 3-phosphate

adenylo-succinate

cyclic-GMP

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

5'-deoxyadenosine

cyclic-AMP

GDP-β-L-galactose

GDP-α-D-mannose

GDP-4-dehydro-α-D-rhamnose

GDP-β-L-gulose

GDP-α-D-rhamnose

ADP-α-D-glucose

ADP-D-ribose

NADH

NADPH

NADP⁺

NAD⁺

β-nicotinamide D-ribonucleotide

(E)-4-hydroxy-3-methylbut 2-en-1-yl diphosphate

(+)-ureidoglycolate

thiamine

L-ascorbate

nicotinate

nicotinamide

biotin

pyridoxal 5'-phosphate

pyridoxamine

pyridoxine

pyridoxamine 5'-phosphate

pyridoxal

pyridoxine 5'-phosphate

5,10-methenyltetrahydrofolate mono-L-glutamate

3-(all-trans-octaprenyl)benzene-1,2-diol

D-gluconate

sucrose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

D-ribulose-1,5-bisphosphate

5-phospho-α-D-ribose 1-diphosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

β-L-galactose 1-phosphate

α-D-galactose 1-phosphate

α-D-mannose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

α-D-ribose-1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

D-ribulose 5-phosphate

glycerol

β-D-fructofuranose

N-acetyl-β-D-mannosamine

hydrogen cyanide

allantoate

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

(S)-(+)-allantoin

choline

agmatine

cadaverine

spermidine

spermine

putrescine

aminopropylcadaverine

L-cysteinylglycine

γ-L-glutamyl-L-cysteine

(S)-citramalate

chorismate

succinate

fumarate

(S)-malate

octanoate

butanoate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

acetate

cis-aconitate

cis-2-methylaconitate

(2R,3S)-2-methylisocitrate

(2S,3S)-2-methylcitrate

D-threo-isocitrate

2,3-dihydroxybenzoate

4-aminobenzoate

4-hydroxybutanoate

(R)-glycerate

(R)-2-hydroxyglutarate

(S)-lactate

(R)-lactate

pyruvate

propanoate

formate

4-(methylsulfanyl)-2-oxobutanoate

glyoxylate

2-oxoglutarate

2-oxobutanoate

N-acetyl-D-mannosamine 6-phosphate

hydrogencarbonate

superoxide

chloride

phosphate

diphosphate

triphosphate

ammonium

H⁺

Fe²⁺

Ca²⁺

menaquinol-8

3-demethylubiquinol-8

ubiquinol-8

demethylmenaquinol-8

phlorisovalerophenone

phlorisobutanophenone

enterobactin

deoxyhumulone

4-prenylphlorisovalerophenone

deoxycohumulone

cohumulone

humulone

urate

4-hydroxybenzoate

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

3-phospho-D-glyceroyl-phosphate

3-phospho-D-glycerate

2-phospho-D-glycerate

(S)-ureidoglycine

nitric oxide

myo-inositol

phytate

D-myo-inositol (3,4)-bisphosphate

D-myo-inositol (3,4,6)-trisphosphate

D-myo-inositol (3,4,5,6)-tetrakisphosphate

D-myo-inositol 1,3,4,5,6-pentakisphosphate

1D-myo-inositol 3-monophosphate

1-octanol

ethanol

oxygen