an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

N-acetylimidazole

citrate

N-(5-phosphoribosyl)-anthranilate

(S)-2,3,4,5-tetrahydrodipicolinate

5-enolpyruvoyl-shikimate 3-phosphate

6-phospho D-glucono-1,5-lactone

butanoyl phosphate

shikimate 3-phosphate

shikimate

5-aminolevulinate

porphobilinogen

preuroporphyrinogen

(S)-4-amino-5-oxopentanoate

oxalosuccinate

3-phosphooxypyruvate

3-deoxy-D-arabino-heptulosonate 7-phosphate

1-deoxy-L-glycero-tetrulose 4-phosphate

5-amino-6-(D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribosylamino)uracil

2-succinylbenzoate

coproporphyrinogen III

β-nicotinate D-ribonucleotide

β-D-ribosylnicotinate

isochorismate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

1,4-dihydroxy-2-naphthoyl-CoA

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

N¹-(5-phospho-β-D-ribosyl)glycinamide

2-(α-hydroxyethyl)thiamine diphosphate

thiamine diphosphate

dihydrolipoamide

S-acetyldihydrolipoamide

orotidine 5'-phosphate

4'-phosphopantetheine

(R)-4'-phosphopantothenate

(R)-4'-phosphopantothenoyl-L-cysteine

3-dehydroquinate

3-dehydroshikimate

poly(ribitol phosphate)

O-D-alanyl-poly(ribitol phosphate)

O-ureido-L-homoserine

canavaninosuccinate

L-arginino-succinate

hexulose 6-phosphate

acetyl phosphate

(R)-5-phosphomevalonate

(R)-mevalonate diphosphate

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

ManNAc-GlcNAc-PP-undecaprenol

CDP-glycerol

anthranilate

4-amino-4-deoxychorismate

urea-1-carboxylate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

2-keto-D-gluconate

2,5-didehydro-D-gluconate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

L-selenocystathionine

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

3'-phosphoadenylyl-sulfate

2-C-methyl-D-erythritol 4-phosphate

3-maleylpyruvate

carbamoyl phosphate

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

3-oxopropanoate

4-aminobutanoate

succinate semialdehyde

(lipoyl)adenylate

(indol-3-yl)pyruvate

ethanolamine

(R)-pantothenate

2-iminoacetate

N-ethylglycine

ethylamine

methylamine

hydrogen peroxide

guanidinoacetate

N^ω-phosphoguanidinoacetate

hydrogen selenide

3-keto-β-D-galactose

2-dehydropantoate

(R)-mevalonate

hydroxypyruvate

xanthine

(S)-dihydroorotate

histidinal

histidinol

L-histidinol phosphate

D-erythro-imidazole-glycerol-phosphate

imidazole acetol-phosphate

luteolin 7-O-β-D-glucuronide

luteolin 7-O-[β-D-glucosyluronate-(1,2)-β-D-glucosiduronate]-4'-O-β-D-glucosiduronate

luteolin 7-O-β-D-diglucuronide

D-gluconate 6-phosphate

carbon monoxide

indole-3-ethanol

pseudouridine 5'-phosphate

4-imidazolone-5-propanoate

urocanate

formamide

isopentenyl diphosphate

prenyl diphosphate

oxaloacetate

2-phenylethanol

2-methylbutanol

2-methylbutanal

3-methylbutanol

3-methylbutanal

isobutanol

indole-3-glycol

indole-3-glycol aldehyde

5-hydroxytryptophol

salicyl alcohol

thiamine phosphate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

4-amino-2-methyl-5-pyrimidinemethanol

dimethylsulfoniopropanoate

4-acetamidobutanal

4-acetamidobutanoate

D-glucurono-6,3-lactone

prop-2-ynal

propynoate

3,4-dihydroxyphenylacetaldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

5-hydroxyindole acetaldehyde

5-hydroxyindole acetate

imidazole acetaldehyde

4-imidazoleacetate

phosphoenolpyruvate

S-ribosyl-L-homocysteine

autoinducer 2

N-acetyl-D-muramate 6-phosphate

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

dihydroxyacetone

glycerone phosphate

2-amino-2-deoxy-D-gluconate 6-phosphate

α-D-glucosamine 1-phosphate

L-canavanine

urea

(S)-3-methyl-2-oxopentanoate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

3-methyl-2-oxobutanoate

(2S)-2-isopropyl-3-oxosuccinate

4-methyl-2-oxopentanoate

3-ethylmalate

2-oxovalerate

(2S)-2-isopropylmalate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

nicotinate adenine dinucleotide

prephenate

enol-phenylpyruvate

CO₂

O-acetyl-L-serine

acetoacetate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

H₂O

2-dehydro-3-deoxy-D-gluconate

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

5-hydroxyindole thiazolidine carboxylate

ammonia

aminoacetone

4-oxoglutaramate

pseudouridine

selenodiglutathione

glutathioselenol

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

(S)-4-hydroxy-2-oxohexanoate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

N⁵-carboxyaminoimidazole ribonucleotide

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

quinolinate

3,5-dihydro-4H-imidazol-4-one

4-aminoimidazole

5-aminoimidazole-4-carboxylate

5-ureidoimidazole-4-carboxylate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

N-acetyl-L,L-2,6-diaminopimelate

chlorate

1,6-anhydro-N-acetyl-β-muramate

H₂

5-aminopentanoate

(2R,4S)-2, 4-diaminopentanoate

(2R)-2-amino-4-oxopentanoate

methylsalicylate

N²-succinyl-L-glutamate 5-semialdehyde

N²-succinylglutamate

1,4-dihydroxy-2-naphthoate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(4S)-4-hydroxy-2-oxoheptanedioate

nitrilotriacetate

iminodiacetate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

chlorite

7-carboxy-7-deazaguanine

DNA without lesion

4-fumaryl-acetoacetate

glutathione disulfide

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

acrylamide

acrylate

4-guanidinobutyramide

4-guanidinobutanoate

(indol-3-yl)acetamide

propionamide

vanillin

(2E,6E)-farnesol

(2E,6E)-farnesyl diphosphate

pristanate

2-iminopropanoate

2-iminobutanoate

2-iminosuccinate

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-cysteinylglycine

N-acetyl-L-glutaminyl-L-glutamine

N-acetyl-L-glutaminyl-L-glutamine amide

D-alanyl-D-alanine

DNA with lesion

ethylphosphate

protoheme

hydrogen cyanide

protoporphyrinogen IX

uroporphyrinogen-I

coproporphyrinogen I

protoporphyrin IX

uroporphyrinogen-III

(Z,Z)-biliverdin-IX α

siroheme

hydrogen sulfide

oxygen

sn-glycerol 3-phosphate

3-phospho-D-glyceroyl-phosphate

(R)-glycerate

2,3-diphospho-D-glycerate

2-phospho-D-glycerate

3-phospho-D-glycerate

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

N-acetyl-D-mannosamine 6-phosphate

1-oleoyl-2-lyso-glycerone phosphate

5,10-methenyltetrahydrofolate mono-L-glutamate

superoxide

nitric oxide

hydroxyl radical

N-acetyl-β-neuraminate

S-(hydroxymethyl)glutathione

S-methyl-L-methionine

methionol

3-(methylsulfanyl)propanal

3-dimethylsulfoniopropionaldehyde

dimethyl sulfide

glutathione

thiocyanate

methanethiol

S-sulfanylglutathione

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

L-cysteate

3-sulfopyruvate

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

thiosulfate

OH^-

nitrite

nitrate

hydrogensulfite

hydrogencarbonate

perchlorate

molybdate

chloride

phosphate

triphosphate

diphosphate

Fe³⁺

Cd²⁺

Fe²⁺

H⁺

ammonium

glycine betaine

betaine aldehyde hydrate

betaine aldehyde

choline

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

agmatine

cadaverine

spermidine

putrescine

3-acetylamino-4-hydroxybenzaldehyde

3-acetylamino-4-hydroxybenzoate

3-amino-4-hydroxybenzaldehyde

3-amino-4-hydroxybenzoate

sn-glycero-3-phosphocholine

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

fluoroacetaldehyde

fluoroacetate

5'-deoxy-5'-fluoroadenosine

5-fluoro-5-deoxy-D-ribose 1-phosphate

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

acetamide

5-amino-4-imidazolecarboxyamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

nicotinamide

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

3'-dephospho-CoA

CoA-disulfide

malonyl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3E)-dec-3-enoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

2-trans-nonenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

4-trans-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

4-cis-undecenoyl-CoA

4-hydroxybenzoyl-CoA

(+)-7-epi-jasmonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

2-methylacetoacetyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

acetyl-CoA

succinyl-CoA

2-methylbutanoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

4-hydroxybutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

(S)-methylmalonyl-CoA

crotonyl-CoA

phytenoyl-CoA

(S)-malyl-CoA

(3Z)-dodec-3-enoyl-CoA

oleoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

cerotoyl-CoA

2-carboxy-cerotoyl-CoA

(Z)-15-tetracosenoyl-CoA

butanoyl-CoA

propanoyl-CoA

hexanoyl-CoA

decanoyl-CoA

lauroyl-CoA

octanoyl-CoA

palmitoyl-CoA

pristanoyl-CoA

3-oxoadipyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

3-oxooctanoyl-CoA

3-oxododecanoyl-CoA

3-oxodecanoyl-CoA

3-oxohexanoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-myristoyl-CoA

all-trans-retinyl palmitate

D-glucono-1,5-lactone

tributyrin

1,2-dibutyrin

FAD

FMNH₂

FMN

(S)-NADHX

(R)-NADHX

NADPH

NADH

NADP⁺

NAD⁺

menaquinol-13

menaquinol-12

menaquinol-11

menaquinol-10

menaquinol-6

menaquinol-9

menaquinol-7

menaquinol-8

demethylmenaquinol-13

demethylmenaquinol-12

demethylmenaquinol-11

demethylmenaquinol-10

demethylmenaquinol-6

demethylmenaquinol-9

demethylmenaquinol-7

demethylmenaquinol-8

(R)-lipoate

coenzyme A

molybdopterin

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

riboflavin

thiamine

nicotinate

pyridoxal 5'-phosphate

menadione

all-trans-retinol

1H-imidazole

(S)-1-pyrroline-5-carboxylate

precorrin-1

precorrin-2

sirohydrochlorin

6,7-dimethyl-8-(1-D-ribityl)lumazine

7,8-dihydromonapterin

7,8-dihydroneopterin

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydroneopterin 3'-phosphate

molybdopterin adenine dinucleotide

cyclic pyranopterin phosphate

7,8-dihydropteroate

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

6-carboxy-5,6,7,8-tetrahydropterin

adenine

guanine

2'-deoxyadenosine

2'-deoxyinosine

2'-deoxyguanosine

adenosine

inosine

guanosine

xanthosine

hypoxanthine

purine

dAMP

dGMP

dITP

dGTP

dATP

dIDP

dGDP

dADP

IDP

GDP

ADP

IMP

XMP

GMP

AMP

ITP

GTP

ATP

dTDP

dTTP

dCMP

dUDP

UDP

dCDP

CDP

dUTP

dCTP

orotate

aminomethylpyrimidine

dTMP

dUMP

UTP

CTP

uracil

formylaminopyrimidine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-α-D-glucose

UDP-α-D-galactose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-mannosamine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

cytidine

uridine

2'-deoxycytidine

2'-deoxyuridine

thymidine

thymine

CMP

UMP

isoguanine

preQ₁

luteolin

preQ₀

4-tyrosol

salicylaldehyde

8-hydroxypurine

6,8-dihydroxypurine

urate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

3-methoxy-4-hydroxyphenylglycol

vanillyl mandelate

phenylacetaldehyde

(4-hydroxyphenyl)acetaldehyde

benzaldehyde

indole

(indol-3-yl)acetaldehyde

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

menadiol

hydroquinone

4-methylphenol

3,4-dihydroxyphenylglycol

3,4-dihydroxyphenylacetate

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxymandelate

salicylate

4-aminobenzoate

benzoate

Gro-P-ManNAc-GlcNAc-PP-undecaprenol

L-α-amino-ε-keto-pimelate

D-serine

L-serine

β-alanine

L-proline

L-leucine

L-alanine

L-glutamine

glycine

D-glutamate

L-glutamate

L-lysine

L-histidine

N^ω-hydroxy-L-arginine

L-arginine

L-aspartate

L-asparagine

L-tyrosine

L-threonine

L-cysteine

L-phenylalanine

L-tryptophan

D-alanine

D-lysine

D-aspartate

D-proline

D-ornithine

L-aspartyl-4-phosphate

L-selenomethionine

seleno-L-homocysteine

L-2-amino-3-oxobutanoate

sarcosine

N-formimino-glycine

D-octopine

L-2-acetamido-6-oxoheptanedioate

formyl-L-isoglutamine

N-formimino-L-glutamate

N-acetyl-L-citrulline

N-acetyl-L-ornithine

N-acetyl-L-methionine

N-acetyl-L-glutamate

N-carbamoyl-L-aspartate

O-acetyl-L-homoserine

3-phospho-L-serine

L-citrulline

L-valine

L-isoleucine

O-phospho-L-homoserine

L-aspartate 4-semialdehyde

L-glutamate-5-semialdehyde

L-homoserine

O-succinyl-L-homoserine

S-sulfo-L-cysteine

hypoglycin A

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

L-homocysteine

L-canaline

L-ornithine

L-4-hydroxyglutamate semialdehyde

meso-diaminopimelate

L-selenocysteine

L-methionine

L-cystathionine

L-isoglutamine

L,L-diaminopimelate

chorismate

(3E)-2-oxohex-3-enedioate

fumarate

succinate

(S)-malate

D-glucarate

cis-aconitate

(2S,3S)-2-methylcitrate

D-threo-isocitrate

gentisate

4-hydroxybutanoate

(R)-3-hydroxybutanoate

(S)-lactate

(R)-lactate

pyruvate

acetate

formate

propanoate

butanoate

octanoate

decanoate

(2E,6E)-farnesoate

(15Z)-tetracosenoate

oleate

apo-4'-lycopenoate

linoleate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

phytenate

palmitate

(R)-pantoate

D-gluconate

D-mannonate

D-tagaturonate

β-D-glucuronate

aldehydo-D-galacturonate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

glyoxylate

2-oxoglutarate

2-oxobutanoate

a coenzyme-A group

methylglyoxal

diacetyl

acetone

6-methoxy-2-all-trans-octaprenyl-1,4-benzoquinone

3-methyl-6-methoxy-2-octaprenyl-1,4-benzoquinone

(R)-acetoin

glycolaldehyde

(2E,6E)-farnesal

formaldehyde

isobutanal

1-propanal

1-octanal

acetaldehyde

butan-1-al

phytenal

D-glyceraldehyde

L-glyceraldehyde

α-D-glucopyranose

β-D-glucopyranose

β-D-ribopyranose

α-D-galactopyranose

β-D-galactopyranose

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

propan-1-ol

ethanol

methanol

butan-1-ol

phytol

glycerol

galactitol

D-sorbitol 6-phosphate

D-mannitol 1-phosphate

ethylene glycol

myo-inositol

1D-myo-inositol 2-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 3-monophosphate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-oleoyl-sn-glycerol 3-phosphate

dioleoyl phosphatidate

di-trans,octa-cis-undecaprenyl phosphate

trans,octacis-decaprenyl phosphate

geranyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-octaprenyl diphosphate

mono-trans,octa-cis-decaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

apo-4'-lycopenal

vanillylamine

1-(β-D ribofuranosyl)nicotinamide

XLLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XXLG xyloglucan oligosaccharide

XXXG xyloglucan oligosaccharide

sucrose

α-lactose

keto-D-fructose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-mannosamine

N-acetyl-β-D-glucosamine

β-D-fructofuranose

D-xylulose

L-ribulose

D-ribulose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

3'-ketolactose

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (mycobacteria)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with an L,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

N-monoacetylchitobiose 6'-phosphate

N,N'-diacetylchitobiose 6'-phosphate

sucrose 6^F-phosphate

β-D-cellobiose 6'-phosphate

GDP-α-D-mannose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

5-phospho-α-D-ribose 1-diphosphate

β-D-fructose 1,6-bisphosphate

salicin 6-phosphate

arbutin-6-phosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

α-D-galactose 6-phosphate

β-D-galactose 6-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

L-ribulose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

α-D-galactose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

methyl β-D-glucoside 6-phosphate

D-altronate

pppGpp

ppGpp

5'-deoxyadenosine

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

adenylo-succinate

8-oxo-GTP

8-oxo-dGTP

cyclic-AMP

5-hydroxy-CTP

2-hydroxy-dATP

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

hypoglycin B