an oxidized electron donor
a reduced electron donor
a deaminated amino group acceptor
an aminated amino group acceptor
Charged-LEU-tRNAs
LEU-tRNAs
a 2-oxo acid
an amino acid
an acyl-CoA
a carboxylate
an oxidized ferredoxin [iron-sulfur] cluster
a reduced ferredoxin [iron-sulfur] cluster
NAD(P)H
NAD(P)+
an L-tyrosyl-[tRNAtyr]
a tRNAtyr
(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde
4α,14α-dimethyl-porifersta-8,25(27)-dienol
2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate
4-methylcyclohex-1,5-diene-1-carbonyl-CoA
isoshowacene
2-hydroxyhexadecanal
16-sinapoyloxypalmitate
3-methylquinolin-2-ol
(22R)-hydroxycholesterol
N-(2-methylpropyl)hydroxylamine
chloroeremomycin
3-hydroxy-3-methylbutanoate
2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
rhamnosyl tetracyclic spinosyn pseudoaglycone
rhamnosyl tricyclic spinosyn pseudoaglycone
spinosyn tricyclic macrolactone
11-dehydro-15-oxo spinosyn macrolactone
15-oxo spinosyn macrolactone
spinosyn macrolactone
diethylamine N-oxide
triethylamine N-oxide
UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate
nitroxyl
trans,octacis-decaprenylphospho-β-D-arabinofuranose
1,3-dihydro-2H-imidazol-2-one
2-phenylethyl β-D-glucopyranoside
formyl hopane
ribosyl hopane
adenosyl hopane
(2Z)-2-hydroxypenta-2,4-dienoate
(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate
(2Z)-2,4-dihydroxypent-2-enoate
(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA
(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA
(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA
(+)-3'-hydroxylarreatricin
(+)-larreatricin
2-trans,4-trans-xanthoxin
oxaloacetate
CO2
carbon monoxide
H2O
succinate semialdehyde
4-aminobutanoate
3-oxopropanoate
(S)-2-acetolactate
(S)-2-aceto-2-hydroxybutanoate
3-phosphooxypyruvate
4-imidazoleacetate
imidazole acetaldehyde
5-hydroxyindole acetate
5-hydroxyindole acetaldehyde
3-methoxy-4-hydroxyphenylglycolaldehyde
3,4-dihydroxyphenylacetaldehyde
propynoate
prop-2-ynal
D-glucurono-6,3-lactone
4-acetamidobutanoate
4-acetamidobutanal
dimethylsulfoniopropanoate
3-methyl-2-oxobutanoate
(S)-3-methyl-2-oxopentanoate
(R)-2,3-dihydroxy-3-methylpentanoate
(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA
luteolin 7-O-β-D-diglucuronide
luteolin 7-O-[β-D-glucosyluronate-(1,2)-β-D-glucosiduronate]-4'-O-β-D-glucosiduronate
luteolin 7-O-β-D-glucuronide
3-keto-β-D-galactose
N-methylhydantoin
adenosine 5'-phosphoselenate
adenosine 5'-phosphosulfate
(4,5-dihydro-5-oxofuran-2-yl)-acetate
(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate
5-hydroxytryptophol
indole-3-glycol aldehyde
indole-3-glycol
isobutanol
3-methylbutanal
3-methylbutanol
2-methylbutanal
2-methylbutanol
2-phenylethanol
phosphoenolpyruvate
5-methylcytosine
urea
S-methyl-5-thio-α-D-ribose 1-phosphate
S-methyl-5'-thioadenosine
5-deoxy-α-ribose 1-phosphate
D-galactosamine-6-phosphate
N-acetyl-D-galactosamine 6-phosphate
glycerone phosphate
(E)-4-coumaroyl-CoA
3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA
2,3-didehydroadipyl-CoA
hydroxypyruvate
diethylthiophosphate
dimethylthiophosphate
diethylphosphate
2-maleylacetate
(2R,3S)-3-isopropylmalate
2-isopropylmaleate
(2S)-2-isopropylmalate
2-dehydropantoate
4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine
4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine
isopentenyl diphosphate
prenyl diphosphate
xanthine
nicotinate adenine dinucleotide
4-guanidinobutanoate
4-guanidinobutyramide
acrylate
acrylamide
(indol-3-yl)acetamide
propionamide
(indol-3 yl)acetyl-CoA
(indol-3-yl)pyruvate
(2E,4Z)-2-hydroxy-6-oxohepta-2,4-dienoate
(2Z,4E)-2-hydroxy-6-oxohexa-2,4-dienoate
2-hydroxy-6-oxohepta-2,4-dienoate
(2Z,4E)-2-hydroxy-5-methyl-6-oxohexa-2,4-dienoate
(2E,4Z)-2-hydroxymuconate
hydrogen peroxide
aminoacetone
5-aminopentanal
phenylglyoxylate
4-hydroxybenzaldehyde
2-(4-hydroxyphenyl)-2-oxoacetate
N-succinyl-L,L-2,6-diaminopimelate
4-maleyl-acetoacetate
homogentisate
S-acetyldihydrolipoamide
dihydrolipoamide
thiamine diphosphate
2-(α-hydroxyethyl)thiamine diphosphate
5-dehydro-4-deoxy-D-glucarate
glycolate
citrate
(E)-glutaconate
5-amino-1-(5-phospho-β-D-ribosyl)imidazole
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate
quinolinate
β-nicotinate D-ribonucleotide
anthranilate
N-(5-phosphoribosyl)-anthranilate
carbamoyl phosphate
S-adenosyl 3-(methylsulfanyl)propylamine
2-oxovalerate
3-ethylmalate
4-methyl-2-oxopentanoate
(2S)-2-isopropyl-3-oxosuccinate
L-arginino-succinate
L-canavanine
canavaninosuccinate
O-ureido-L-homoserine
2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine
N1-(5-phospho-β-D-ribosyl)glycinamide
5-phospho-β-D-ribosylamine
N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide
5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole
orotidine 5'-phosphate
(S)-dihydroorotate
histidinol
histidinal
imidazole acetol-phosphate
D-erythro-imidazole-glycerol-phosphate
L-histidinol phosphate
(R)-mevalonate
2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one
5-amino-6-(D-ribitylamino)uracil
pseudouridine 5'-phosphate
(R)-5-phosphomevalonate
3-dehydroshikimate
3-dehydroquinate
5-enolpyruvoyl-shikimate 3-phosphate
shikimate 3-phosphate
shikimate
3-deoxy-D-arabino-heptulosonate 7-phosphate
prephenate
thiamine phosphate
preuroporphyrinogen
5-aminolevulinate
(S)-4-amino-5-oxopentanoate
porphobilinogen
N-acetyl-L-glutamate 5-semialdehyde
N-acetylglutamyl-phosphate
2-dehydro-3-deoxy-D-gluconate
(lipoyl)adenylate
(R)-mandelate
(S)-mandelate
(R)-mevalonate diphosphate
(4Z)-2-oxohept-4-enedioate
(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate
prephytoene diphosphate
coenzyme F390-A
methylsalicylate
salicyl alcohol
4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate
hydrogenobyrinate
5-amino-6-(5-phospho-D-ribosylamino)uracil
5-amino-6-(5-phospho-D-ribitylamino)uracil
(4-hydroxyphenyl)acetate
cyclic-2,3-O-oxalyl-L-threonate
dehydroascorbate (bicyclic form)
ammonia
5-hydroxyindole thiazolidine carboxylate
(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one
(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one
enol-phenylpyruvate
cyclic- 3,4-O-oxalyl-L-threonate
2,3-dioxo-L-gulonate
(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran
(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran
2-carboxy-L-xylonolactone
2-carboxy-L-threo-pentonate
carbonic acid
dihydromethanophenazine
CoB-CoM heterodisulfide
methanophenazine
coenzyme B
H2
N-ethylammeline
deethylsimazine
3-(O-geranylgeranyl)-sn-glycerol 1-phosphate
4-amino-4-deoxychorismate
O-acetyl-L-serine
hydrogen selenide
hexulose 6-phosphate
4-prenylphlorisobutyrophenone
N5-carboxyaminoimidazole ribonucleotide
oxalosuccinate
2-dehydro-3-deoxy-D-gluconate 6-phosphate
3-hydroxypropanoate
4-amino-2-methyl-5-pyrimidinemethanol
autoinducer 2
S-ribosyl-L-homocysteine
citraconate
(2R,3S)-3-methylmalate
L-gulono-1,4-lactone
L-xylo-hex-3-ulono-1,4-lactone
α-D-galacturonate 1-phosphate
L-dehydro-ascorbate
(2E,6E)-farnesyl diphosphate
pristanate
L-homocysteine
L-cysteinylglycine
N-acetyl-L-glutaminyl-L-glutamine amide
N-acetyl-L-glutaminyl-L-glutamine
(R)-4-hydroxymandelate
(S)-4-hydroxymandelate
2-iminosuccinate
2-iminobutanoate
hypoglycin B
L-phenylalanine
L-alanine
L-proline
glycine
L-tryptophan
L-valine
L-isoleucine
L-leucine
L-selenocysteine
L-methionine
L-cysteine
L-glutamate
L-aspartate
L-glutamine
L-serine
L-threonine
L-asparagine
L-aspartyl-4-phosphate
L,L-diaminopimelate
L-arginine
L-ornithine
L-histidine
L-tyrosine
L-cystathionine
N-carbamoyl-L-aspartate
N-acetyl-L-ornithine
N-acetyl-L-citrulline
L-citrulline
hypoglycin A
S-adenosyl-L-homocysteine
S-adenosyl-L-methionine
O-phospho-L-homoserine
L-homoserine
L-aspartate 4-semialdehyde
L-glutamate-5-semialdehyde
S-sulfo-L-cysteine
L-selenomethionine
seleno-L-homocysteine
3-phospho-L-serine
N-acetyl-L-glutamate
sarcosine
N-carbamoylsarcosine
β-alanine
GDP
AMP
GMP
XMP
ATP
ADP
5'-deoxyadenosine
GTP
IDP
ITP
dADP
dGDP
2'-deoxyadenosine
2'-deoxyguanosine
hypoxanthine
2'-deoxyinosine
5-chloro-5-deoxyribose 1-phosphate
5'-chloro-5'-deoxyadenosine
dATP
dGTP
1-(5-phospho-β-D-ribosyl)-AMP
1-(5-phospho-β-D-ribosyl)-ATP
cyclic-AMP
adenylo-succinate
IMP
dITP
dIDP
dGMP
dAMP
dTDP-4-dehydro-6-deoxy-α-D-glucopyranose
ADP-D-ribose
ADP ribose 1''-phosphate
ADP ribose 1'',2''-cyclic phosphate
GDP-α-D-mannose
dTDP-4-dehydro-β-L-rhamnose
dTDP-β-L-rhamnose
dTDP-α-D-glucose
UDP-α-D-galactose
UDP-α-D-glucose
UDP-α-D-glucuronate
UDP-α-D-galacturonate
adenine
guanine
uracil
cytosine
thymine
NAD+
NADP+
NADH
NADPH
dTMP
dCMP
dUMP
dCDP
dUDP
dTDP
dUTP
dCTP
dTTP
CDP
UDP
β-nicotinamide D-ribonucleotide
UTP
CTP
CMP
UMP
xanthosine
guanosine
adenosine
inosine
5-fluorouracil
5'-deoxy-5'-fluoroadenosine
5-fluorocytosine
D-gluconate
L-gulonate
aldehydo-L-galactonate
3'-ketolactose
galactinol
5-phospho-α-D-ribose 1-diphosphate
1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate
D-erythrose 4-phosphate
D-sedoheptulose 7-phosphate
α-D-glucopyranose 1-phosphate
α-D-mannose 1-phosphate
β-D-glucopyranose 1-phosphate
β-D-fructofuranose 6-phosphate
D-fructose 6-phosphate
β-D-fructose 1,6-bisphosphate
β-D-glucose 6-phosphate
α-D-glucose 6-phosphate
α-D-mannopyranose 6-phosphate
β-D-mannopyranose 6-phosphate
α-D-ribose-1-phosphate
5-fluoro-5-deoxy-D-ribose 1-phosphate
2-deoxy-α-D-ribose 1-phosphate
D-xylulose 5-phosphate
aldehydo-D-ribose 5-phosphate
α-D-ribose 5-phosphate
β-D-ribose 5-phosphate
D-ribulose 5-phosphate
D-glyceraldehyde 3-phosphate
sucrose 6F-phosphate
β-D-fructofuranose
keto-D-fructose
keto-L-sorbose
α-D-xylopyranose
aldehydo-D-ribose
α-D-ribofuranose
β-D-ribofuranose
β-D-galactopyranose
β-D-glucopyranose
α-D-glucopyranose
D-glyceraldehyde
glycerol
L-iditol
D-sorbitol
XXXG xyloglucan oligosaccharide
maltotriose
sucrose
isoprimeverose
α-maltose
α-lactose
α,α-trehalose
maltotetraose
maltopentaose
maltohexaose
maltoheptaose
raffinose
XXLG xyloglucan oligosaccharide
XLXG xyloglucan oligosaccharide
XLLG xyloglucan oligosaccharide
aldehydo-D-galacturonate
phlorisovalerophenone
salicylaldehyde
all-trans-retinol
all-trans-retinyl palmitate
(3S)-linalool
(3R)-linalool
geranyl diphosphate
15-cis-phytoene
β-zeacarotene
β-carotene
myxol
plectaniaxanthin
all-trans-phytoene
1'-hydroxy-γ-carotene
zeaxanthin
β-cryptoxanthin
hydroxy-β-zeacarotene
deoxycohumulone
4-prenylphlorisovalerophenone
deoxyhumulone
unsaturated CDP-archaeol
saturated CDP-archaeol
2,3-bis-O-(geranylgeranyl)-sn-glycerol 1-phosphate
2,3-bis-O-phytanyl-sn-glycerol 1-phosphate
1,2-dibutyrin
tributyrin
di-trans,octa-cis-undecaprenyl phosphate
di-trans,octa-cis-undecaprenyl diphosphate
2-cis,6-trans,10-trans-geranylgeranyl diphosphate
geranylgeranyl diphosphate
3-octaprenyl-4-hydroxybenzoate
myo-inositol
1D-myo-inositol 3-monophosphate
1D-myo-inositol 4-monophosphate
1D-myo-inositol 5-monophosphate
1D-myo-inositol 6-monophosphate
1D-myo-inositol 1-monophosphate
1D-myo-inositol 2-monophosphate
3,4-dihydroxymandelate
3,4-dihydroxyphenylglycolaldehyde
3,4-dihydroxyphenylacetate
3,4-dihydroxyphenylglycol
3-methylcatechol
catechol
4-methylcatechol
3-sulfocatechol
ethanol
propan-1-ol
phytol
butan-1-ol
methanol
(2E,6E)-farnesal
fluoroacetaldehyde
methylglyoxal
(4-hydroxyphenyl)acetaldehyde
phenylacetaldehyde
benzaldehyde
phytenal
1-octanal
acetaldehyde
1-propanal
isobutanal
formaldehyde
butan-1-al
caldariellaquinone
diacetyl
pyruvate
2-oxoglutarate
2-oxobutanoate
glyoxylate
3-phenyl-2-oxopropanoate
salicylate
4-aminobenzoate
benzoate
acetate
fluoroacetate
orotate
allantoate
aldehydo-D-glucuronate
β-D-glucuronate
(S)-1-pyrroline-5-carboxylate
leukotriene-D4
leukotriene-E4
octanoate
decanoate
palmitate
butanoate
α-linolenate
(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate
oleate
linoleate
phytenate
(15Z)-tetracosenoate
(2E,6E)-farnesoate
3-oxoadipate
formate
propanoate
(S)-lactate
(R)-lactate
4-hydroxybutanoate
(R)-2-hydroxyglutarate
(R)-glycerate
(2S,3S)-2-methylcitrate
cis-aconitate
D-threo-isocitrate
chorismate
D-glucarate
D-galactarate
fumarate
maleate
succinate
(S)-malate
4-tyrosol
6-hydroxy-2-cyclohexen-one-carboxylate
salicyl-6-hydroxy-2-cyclohexene-on-oyl
luteolin
2-phenylethylamine
4-aminophenol
4-nitrophenol
caldariellaquinol
(indol-3-yl)acetaldehyde
indole
(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate
amino-parathion
parathion
methyl parathion
vanillyl mandelate
3-methoxy-4-hydroxyphenylglycol
hydrogen cyanide
7,8-dihydroneopterin 3'-triphosphate
7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate
(7,8-dihydropterin-6-yl)methyl diphosphate
guanylyl molybdenum cofactor
MoO2-molybdopterin cofactor
7,8-dihydropteroate
7,8-dihydrofolate monoglutamate
N10-formyldihydrofolate
5,6,7,8-tetrahydrofolate
tetrahydropteroyl tri-L-glutamate
5-methyltetrahydropteroyl tri-L-glutamate
5,10-methylenetetrahydropteroyl mono-L-glutamate
riboflavin
FAD
FADH2
6,7-dimethyl-8-(1-D-ribityl)lumazine
sirohydrochlorin
cobyrinate
precorrin-2
precorrin-1
precorrin-4
precorrin-3B
precorrin-3A
cobalt-precorrin-2
precorrin-8x
cobalt-precorrin-6A
cobalt-precorrin-5B
cobalt-precorrin-5A
cobalt-precorrin-4
cobalt-precorrin-6B
cobalt-precorrin-8
cobalt-precorrin-7
cobalt-precorrin-3
thiamine
nicotinate
L-ascorbate
pyridoxal 5'-phosphate
coenzyme A
(R)-lipoate
coenzyme M
oxidized coenzyme F420-2
(R)-NADHX
(S)-NADHX
D-glucono-1,5-lactone
cis-dienelactone
trans-dienelactone
L-galactono-1,4-lactone
acetyl-CoA
(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA
(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA
2-methylacetoacetyl-CoA
α-linolenoyl-CoA
linoleoyl-CoA
methylacrylyl-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA
(3S)-hydroxyadipyl-CoA
(E)-2-methylcrotonoyl-CoA
(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA
3-hydroxyisovaleryl-CoA
malonyl-CoA
succinyl-CoA
(3S)-citryl-CoA
isobutanoyl-CoA
(E)-glutaconyl-CoA
(R)-2-hydroxyglutaryl-CoA
(S)-3-hydroxy-3-methylglutaryl-CoA
4-hydroxybutanoyl-CoA
acryloyl-CoA
3-hydroxypropanoyl-CoA
2-methylbutanoyl-CoA
(S)-3-hydroxy-isobutanoyl-CoA
oleoyl-CoA
acetoacetyl-CoA
3-oxopentanoyl-CoA
palmitoyl-CoA
pristanoyl-CoA
octanoyl-CoA
decanoyl-CoA
propanoyl-CoA
cerotoyl-CoA
(Z)-15-tetracosenoyl-CoA
2-carboxy-cerotoyl-CoA
(S)-3-hydroxybutanoyl-CoA
(S)-3-hydroxydecanoyl-CoA
(S)-3-hydroxyoctanoyl-CoA
phytenoyl-CoA
(2E)-dec-2-enoyl-CoA
(2E)-oct-2-enoyl-CoA
crotonyl-CoA
(S)-methylmalonyl-CoA
(R)-methylmalonyl-CoA
(indol-3-yl)acetate
methyl (indol-3-yl)acetate
1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide
phosphoribulosylformimino-AICAR-phosphate
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide
5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide
acetamide
(S)-2-chloropropanoate
2-chloroacetate
agmatine
putrescine
cadaverine
spermidine
dehydrospermidine
N-acetylputrescine
(2Z)-2-aminobut-2-enoate
sulfate
sulfite
selenate
thiosulfate
hydrogensulfite
hydrogencarbonate
superoxide
phosphate
diphosphate
chloride
fluoride
Cu2+
Co2+
Hg2+
ammonium
H+
S-(hydroxymethyl)glutathione
3-dimethylsulfoniopropionaldehyde
3-(methylsulfanyl)propanal
methionol
glutathione
(R)-S-lactoylglutathione
3-sulfopyruvate
L-cysteate
4-methyl-5-(2-phosphooxyethyl)thiazole
5-(2-hydroxyethyl)-4-methylthiazole
thiocyanate
paraoxon
monodehydroascorbate radical
nitric oxide
2-octaprenylphenol
(S)-3-hydroxy-isobutanoate
(S)-methylmalonate-semialdehyde
(R)-methylmalonate-semialdehyde
(R)-citramalate
(S)-ureidoglycine
(2R)-2,3-dihydroxy-3-methylbutanoate
3-phospho-D-glyceroyl-phosphate
2,3-diphospho-D-glycerate
3-phospho-D-glycerate
2-phospho-D-glycerate
sn-glycerol 3-phosphate
sn-glycerol 1-phosphate
hydrogen sulfide
Hg0
oxygen
uroporphyrinogen-III
uroporphyrinogen-I
protoheme
nitrous oxide
cobalt-sirohydrochlorin
adenosylcobyrate
adenosyl-cob(III)yrinate a,c-diamide
cob(II)yrinate a,c-diamide
cobalt-factor III
cob(II)yrinate c-monoamide
carboxyphosphinopyruvate
1-carboxyvinyl carboxyphosphonate
3-(hydroxyphosphinoyl)pyruvate
all-trans-hexaprenyl diphosphate