ID Name References
C1

an oxidized electron donor

C2

a reduced electron donor

C3

a deaminated amino group acceptor

C4

an aminated amino group acceptor

C5

Charged-LEU-tRNAs

C6

LEU-tRNAs

C7

a 2-oxo acid

C8

an amino acid

C9

an acyl-CoA

C10

a carboxylate

C11

an oxidized ferredoxin [iron-sulfur] cluster

C12

a reduced ferredoxin [iron-sulfur] cluster

C13

NAD(P)H

C14

NAD(P)+

C15

an L-tyrosyl-[tRNAtyr]

C16

a tRNAtyr

C17

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

C18

4α,14α-dimethyl-porifersta-8,25(27)-dienol

C24

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

C26

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

C27

isoshowacene

C29

2-hydroxyhexadecanal

C30

16-sinapoyloxypalmitate

C31

3-methylquinolin-2-ol

C32

(22R)-hydroxycholesterol

C37

N-(2-methylpropyl)hydroxylamine

C38

chloroeremomycin

C39

3-hydroxy-3-methylbutanoate

C40

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C41

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C42

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C43

rhamnosyl tetracyclic spinosyn pseudoaglycone

C44

rhamnosyl tricyclic spinosyn pseudoaglycone

C45

spinosyn tricyclic macrolactone

C46

11-dehydro-15-oxo spinosyn macrolactone

C47

15-oxo spinosyn macrolactone

C48

spinosyn macrolactone

C51

diethylamine N-oxide

C52

triethylamine N-oxide

C53

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

C55

nitroxyl

C57

trans,octacis-decaprenylphospho-β-D-arabinofuranose

C58

1,3-dihydro-2H-imidazol-2-one

C63

2-phenylethyl β-D-glucopyranoside

C64

formyl hopane

C65

ribosyl hopane

C66

adenosyl hopane

C70

(2Z)-2-hydroxypenta-2,4-dienoate

C72

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

C73

(2Z)-2,4-dihydroxypent-2-enoate

C75

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

C76

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

C77

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

C79

(+)-3'-hydroxylarreatricin

C80

(+)-larreatricin

C81

2-trans,4-trans-xanthoxin

C1631

3-amino-1-hydroxyacetone 1-phosphate

C1548

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

C13928

urea-1-carboxylate

C7865

urea

C11836

hydroxypyruvate

C11838

2-succinylbenzoate

C11639

succinate semialdehyde

C13950

pimeloyl-CoA

C15056

salicyl alcohol

C2580

methylsalicylate

C12368

(S)-2,3,4,5-tetrahydrodipicolinate

C1196

S-methyl-5'-thioadenosine

C15238

5-deoxy-α-ribose 1-phosphate

C13723

arsenite

C11652

shikimate 3-phosphate

C1231

5-aminolevulinate

C1186

5-oxo-L-proline

C11832

orotidine 5'-phosphate

C12056

L-arginino-succinate

C933

L-canavanine

C932

canavaninosuccinate

C12178

histidinal

C13843

cyanate

C3295

2-keto-D-gluconate

C12274

enol-phenylpyruvate

C8407

5-hydroxyindole acetaldehyde

C8399

5-hydroxytryptophol

C423

3-methoxy-4-hydroxyphenylglycolaldehyde

C8410

indole-3-glycol aldehyde

C8344

indole-3-glycol

C12102

isobutanol

C13801

3-methylbutanal

C13800

3-methylbutanol

C11976

2-methylbutanal

C13799

2-methylbutanol

C13798

2-phenylethanol

C11982

methylamine

C12256

ethylamine

C689

N-ethylglycine

C352

2-iminoacetate

C12158

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

C1036

α-ribazole 5'-phosphate

C12315

5,6-dimethylbenzimidazole

C1538

2-C-methyl-D-erythritol 4-phosphate

C1621

(R)-2,3-dihydroxy-3-methylpentanoate

C14003

N-acetyl-L-glutamate 5-semialdehyde

C6614

O-ureido-L-homoserine

C14068

6-deoxyerythronolide B

C949

lipid X

C12088

isoquinolin-2(1H)-one

C12086

isoquinoline

C3259

2-oxovalerate

C506

3-ethylmalate

C13786

(2S)-2-isopropyl-3-oxosuccinate

C1530

(2R,3S)-3-isopropylmalate

C13417

2-isopropylmaleate

C3850

5-amino-6-(D-ribitylamino)uracil

C14005

prephytoene diphosphate

C7349

chloramphenicol

C12214

(S)-4-amino-5-oxopentanoate

C1020

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

C11874

N-succinyl-2-amino-6-ketopimelate

C1112

ManNAc-GlcNAc-PP-undecaprenol

C2346

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

C13851

hydrogenobyrinate

C11688

S-adenosyl 3-(methylsulfanyl)propylamine

C571

4-hydroxy-2-nonenal

C927

carbon monoxide

C4037

presqualene diphosphate

C4201

squalene

C13850

hydrogenobyrinate a,c-diamide

C11754

propanoyl phosphate

C11711

(R)-1-amino-2-propanol O-2-phosphate

C14137

4-acetamidobutanoate

C14179

4-acetamidobutanal

C11869

N2-succinylglutamate

C13638

N2-succinyl-L-glutamate 5-semialdehyde

C13716

4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate

C12326

1-deoxy-L-glycero-tetrulose 4-phosphate

C11800

(R)-pantothenate

C13627

DNA without lesion

C12325

1,4-dihydroxy-2-naphthoate

C13283

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

C11849

norspermidine

C13257

carboxynorspermidine

C1078

(S)-2-amino-6-oxohexanoate

C12492

1,6-anhydro-N-acetyl-β-muramate

C12230

formamide

C6597

3-ureidopropanoate

C857

FK-506

C859

31-O-desmethylFK-506

C1038

α-ribazole

C15215

(L-threonylcarbamoyl)adenylate

C1449

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

C14181

2-maleylacetate

C13196

methyl-1,4-benzoquinol

C13197

2-methyl-1,4-benzoquinone

C11873

N-succinyl-L,L-2,6-diaminopimelate

C1503

2-dehydro-3-deoxy-D-gluconate 6-phosphate

C15156

dialurate

C12105

propan-2-ol

C11557

urocanate

C1285

4-imidazolone-5-propanoate

C13284

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

C14075

N2-succinyl-L-arginine

C11868

N2-succinyl-L-ornithine

C12174

4-amino-2-methyl-5-pyrimidinemethanol

C13983

α-D-galacturonate 1-phosphate

C12324

autoinducer 2

C12029

S-ribosyl-L-homocysteine

C14149

2-dehydro-6-phospho-D-gluconate

C12848

N5-carboxyaminoimidazole ribonucleotide

C623

(3S,5S)-3,5-diaminohexanoate

C15181

(S)-5-amino-3-oxohexanoate

C1550

2-amino-3-carboxymuconate-6-semialdehyde

C379

6-(2-amino-2-carboxylatoethyl)-1,2,3,4-tetrahydroquinoline-2,4-dicarboxylate

C380

2-amino-4-[3-(2-amino-2-carboxylatoethyl)-6-oxocyclohexa-1,4-dien-1-yl]pentanedioate

C381

2-amino-4-[5-(2-amino-2-carboxylatoethyl)-2-hydroxyphenyl]pentanedioate

C378

6-(2-amino-2-carboxylatoethyl)-7-hydroxy-8-oxo-1,2,3,4,7,8-hexahydroquinoline-2,4-dicarboxylate

C4688

glutathioselenol

C4690

selenodiglutathione

C13955

octadecanal

C12046

L-gulono-1,4-lactone

C14156

L-xylo-hex-3-ulono-1,4-lactone

C13702

1-piperideine 6-carboxylate

C1271

4-oxoglutaramate

C13901

1-pyrroline

C1010

ammonia

C446

5-hydroxyindole thiazolidine carboxylate

C583

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C585

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C12054

L-dehydro-ascorbate

C158

cyclic-2,3-O-oxalyl-L-threonate

C163

dehydroascorbate (bicyclic form)

C435

bisorganyltrisulfane

C582

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C584

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C162

cyclic- 3,4-O-oxalyl-L-threonate

C14153

2,3-dioxo-L-gulonate

C159

2-carboxy-L-xylonolactone

C160

2-carboxy-L-threo-pentonate

C11543

H2O

C12192

carbonic acid

C928

CO2

C3417

(S)-3-methyl-2-oxopentanoate

C3319

4-methyl-2-oxopentanoate

C3262

3-methyl-2-oxobutanoate

C11760

prephenate

C11483

glycolate

C11493

2-phosphoglycolate

C1325

4-amino-4-deoxychorismate

C13225

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

C12164

H2

C11812

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

C11826

oxalosuccinate

C12218

α-D-glucosamine 1-phosphate

C13854

hydrogen selenide

C1102

O-acetyl-L-serine

C12394

6-phospho D-glucono-1,5-lactone

C1002

anthranilate

C451

4-methylumbelliferyl glucoside

C1297

4-hydroxybenzaldehyde

C11662

scopolin

C13738

cis-coumarinic acid-β-D-glucoside

C12355

dethiobiotin

C1429

3-deoxy-D-arabino-heptulosonate 7-phosphate

C11479

phosphoenolpyruvate

C15202

2-amino-2-deoxy-D-gluconate 6-phosphate

C10349

glycerone phosphate

C12494

N-acetyl-D-muramate 6-phosphate

C6359

(S)-2-acetolactate

C6369

(S)-2-aceto-2-hydroxybutanoate

C14074

prenyl diphosphate

C12364

isopentenyl diphosphate

C9422

nicotinate adenine dinucleotide

C6444

oxaloacetate

C1431

3-dehydroshikimate

C11653

shikimate

C12369

3-dehydroquinate

C11723

L-quinate

C12139

preuroporphyrinogen

C11767

porphobilinogen

C873

coproporphyrinogen III

C11794

3'-phosphoadenylyl-sulfate

C192

adenosine 5'-phosphoselenate

C996

adenosine 5'-phosphosulfate

C1172

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

C1171

2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine

C1182

N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide

C1180

N1-(5-phospho-β-D-ribosyl)glycinamide

C12162

hydrogen peroxide

C11606

thiamine phosphate

C1018

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

C13281

1,4-dihydroxy-2-naphthoyl-CoA

C13824

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

C12096

isochorismate

C11693

(indol-3 yl)acetyl-CoA

C8333

(indol-3-yl)pyruvate

C1438

(2S)-2-isopropylmalate

C1427

5-enolpyruvoyl-shikimate 3-phosphate

C6361

acetoacetate

C12176

histidinol

C12044

L-histidinol phosphate

C3656

D-gluconate 6-phosphate

C11802

4'-phosphopantetheine

C11710

(R)-4'-phosphopantothenoyl-L-cysteine

C1268

(R)-4'-phosphopantothenate

C11930

N-acetylglutamyl-phosphate

C11774

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

C3684

3-deoxy-α-D-manno-2-octulosonate

C12074

3-deoxy-D-manno-octulosonate 8-phosphate

C12254

ethanolamine

C12352

(S)-dihydroorotate

C10274

5-amino-6-(5-phospho-D-ribosylamino)uracil

C3829

5-amino-6-(5-phospho-D-ribitylamino)uracil

C4674

glutathione disulfide

C11715

quinolinate

C11857

β-nicotinate D-ribonucleotide

C891

citrate

C12350

7,8-diaminopelargonate

C3264

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

C1130

8-amino-7-oxononanoate

C1184

5-phospho-β-D-ribosylamine

C12351

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

C11604

thiamine diphosphate

C1321

4-aminobutanoate

C12125

imidazole acetol-phosphate

C12390

D-erythro-imidazole-glycerol-phosphate

C13919

4-guanidinobutanoate

C1303

4-guanidinobutyramide

C1096

acrylate

C1098

acrylamide

C8366

(indol-3-yl)acetamide

C11756

propionamide

C1528

2-dehydropantoate

C3338

2-oxoglutaramate

C12031

S-Inosyl-L-homocysteine

C638

5-(methylsulfanyl)-ribulose 1-phosphate

C14053

S-methyl-5-thio-α-D-ribose 1-phosphate

C1353

3-phosphooxypyruvate

C1265

4-phosphooxy-L-threonine

C3343

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

C1522

3-demethylubiquinol-6

C13635

β-D-ribosylnicotinate

C14218

L-β-lysine

C142

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

C11946

N-(5-phosphoribosyl)-anthranilate

C8364

indole-3-ethanol

C13769

6-(2-amino-2-carboxyethyl)-7,8-dioxo-1,2,3,4,7,8-hexahydroquinoline 2,4-dicarboxylate

C13913

N-carbamoylputrescine

C2191

carbamoyl phosphate

C6099

lipid IVA

C10794

lipid A disaccharide (E. coli)

C1391

3-mercaptopyruvate

C1108

acetyl phosphate

C11690

S-acetyldihydrolipoamide

C12333

dihydrolipoamide

C1552

2-(α-hydroxyethyl)thiamine diphosphate

C12048

γ-L-glutamyl 5-phosphate

C9077

(2E,6E)-farnesyl diphosphate

C2774

pristanate

C6043

4-methylphenol

C12247

L-homocysteine

C1328

L-cysteinylglycine

C8518

γ-L-glutamyl-L-cysteine

C1434

D-alanyl-D-alanine

C2576

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

C2562

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

C6708

2-iminopropanoate

C6599

2-iminobutanoate

C6596

2-iminosuccinate

C11520

hypoglycin B

C5032

carbamate

C3536

L-α-amino-ε-keto-pimelate

C2469

L-phenylalanine

C5603

L-isoleucine

C5588

L-leucine

C5571

L-valine

C5597

L-alanine

C5592

L-selenocysteine

C5583

L-methionine

C5581

L-proline

C5612

L-cysteine

C5575

L-tryptophan

C12067

glycine

C5580

L,L-diaminopimelate

C5642

L-arginine

C12231

L-ornithine

C5605

L-histidine

C5573

L-tyrosine

C5630

Nω-hydroxy-L-arginine

C5595

L-cystathionine

C5601

L-isoglutamine

C5607

L-glutamate

C5584

L-lysine

C5609

L-glutamine

C5643

L-asparagine

C5596

L-aspartate

C5577

L-threonine

C5579

L-serine

C12073

L-aspartyl-4-phosphate

C13322

N-carbamoyl-L-aspartate

C5478

N-formyl-L-glutamate

C5476

formyl-L-isoglutamine

C15000

N-acetyl-L-ornithine

C14988

N-acetyl-L-citrulline

C3621

N-acetyl-L-aspartate

C5466

N-formimino-L-glutamate

C12303

L-citrulline

C12261

hypoglycin A

C12245

L-homoserine

C12227

O-succinyl-L-homoserine

C12237

L-canaline

C2426

S-sulfo-L-cysteine

C15292

S-adenosyl-L-methionine

C12203

S-adenosyl-L-homocysteine

C12229

O-phospho-L-homoserine

C12239

L-aspartate 4-semialdehyde

C12233

L-glutamate-5-semialdehyde

C5585

meso-diaminopimelate

C2488

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

C12061

L-selenomethionine

C12063

seleno-L-homocysteine

C12065

L-saccharopine

C3652

L-threonine 3-O-phosphate

C3402

3-phospho-L-serine

C13320

N-carbamoylglycine

C14973

N-acetyl-L-glutamate

C14976

N-acetyl-L-methionine

C3628

sarcosine

C8805

D-aspartate

C8799

D-alanine

C8797

D-glutamate

C8790

D-phenylalanine

C11441

β-alanine

C11434

(R)-3-amino-2-methylpropanoate

C5485

1-(5-phospho-β-D-ribosyl)-ATP

C7653

guanosine 3'-monophosphate

C7641

adenosine 3'-monophosphate

C7759

ITP

C7817

IDP

C7749

dITP

C7747

dIDP

C7643

cyclic-GMP

C7848

2'-deoxyguanosine

C7813

2'-deoxyadenosine

C7840

dGMP

C7743

dAMP

C7757

ADP

C7844

ATP

C7809

AMP

C10288

adenylo-succinate

C7652

cyclic-AMP

C5552

5'-deoxyadenosine

C7783

dATP

C7745

GTP

C7751

dGTP

C7795

GDP

C7811

XMP

C7741

IMP

C7823

dADP

C7807

dGDP

C5489

1-(5-phospho-β-D-ribosyl)-AMP

C7827

GMP

C10266

ppGpp

C10267

pppGpp

C7801

5,6-dihydrothymine

C4012

5,6-dihydrouracil

C2151

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

C10263

ADP-α-D-glucose

C1015

GDP-α-D-glucose

C1043

GDP-4-dehydro-α-D-rhamnose

C1009

GDP-α-D-mannose

C7189

GDP-β-L-fucose

C10343

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C8423

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C1900

dTDP-β-L-mycarose

C1969

dTDP-D-desosamine

C1939

dTDP-α-D-glucose

C1896

dTDP-4-dehydro-β-L-rhamnose

C1930

dTDP-β-L-rhamnose

C7824

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

C7742

UDP-N-acetyl-α-D-muramoyl-L-alanine

C7822

UDP-N-acetyl-α-D-muramate

C7722

UDP-α-D-glucuronate

C7734

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

C7764

UDP-α-D-galacturonate

C7776

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

C7740

UDP-α-D-sulfoquinovopyranose

C7814

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

C5849

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

C7804

UDP-α-D-galactofuranose

C7782

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

C8666

UDP-α-D-galactose

C7780

UDP-α-D-glucose

C7790

UDP-N-acetyl-α-D-mannosamine

C7808

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

C7444

UDP-N-acetyl-α-D-glucosamine

C5150

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

C8547

UDP-N-acetyl-α-D-mannosaminuronate

C5090

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C5094

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C5848

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C6744

CMP-N-acetyl-β-neuraminate

C8305

CMP-3-deoxy-β-D-manno-octulosonate

C9454

adenine

C8739

uracil

C10601

thymine

C9540

preQ1

C6460

cytidine-3'-monophosphate

C6462

uridine 3'-monophosphate

C4018

NADP+

C4020

NAD+

C14497

NADPH

C14500

NADH

C1817

cyclic di-3',5'-guanylate

C8755

dCMP

C8770

dUMP

C8744

dTMP

C8752

dUDP

C8733

dCDP

C8720

dTDP

C8772

dCTP

C8724

dUTP

C8764

dTTP

C8732

CDP

C8714

UDP

C9443

2-methylsulfanyl-N6-dimethylallyladenosine37 in tRNA

C9444

2-sulfanyl-N6-dimethylallyladenosine37 in tRNA

C4240

reduced β-nicotinamide D-ribonucleotide

C4243

β-nicotinamide D-ribonucleotide

C8761

CTP

C8760

UTP

C2245

CMP

C2241

UMP

C15088

adenosine

C15094

xanthosine

C15091

inosine

C15085

guanosine

C2706

uridine

C2702

cytidine

C1804

P1,P4-bis(5'-adenosyl) tetraphosphate

C11485

D-gluconate

C3678

aldehydo-L-galactonate

C3679

L-gulonate

C4086

1-(β-D ribofuranosyl)nicotinamide

C11619

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

C13376

lotaustralin

C13426

taxiphyllin

C13380

linustatin

C13404

neolinustatin

C13392

linamarin

C10342

D-sedoheptulose 1,7-bisphosphate

C10356

4-phospho-D-erythronate

C10340

D-erythrose 4-phosphate

C10338

5-phospho-α-D-ribose 1-diphosphate

C15289

D-sedoheptulose 7-phosphate

C10350

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

C8813

α-D-mannose 1-phosphate

C8811

α-D-glucopyranose 1-phosphate

C3186

N-acetyl-α-D-glucosamine 1-phosphate

C2082

β-D-fructofuranose 1-phosphate

C2129

β-D-glucopyranose 1-phosphate

C2115

α-D-galactose 6-phosphate

C2116

β-D-galactose 6-phosphate

C15303

D-fructose 6-phosphate

C10326

β-D-fructose 1,6-bisphosphate

C2989

β-D-fructofuranose 6-phosphate

C2123

β-D-glucose 6-phosphate

C2125

α-D-glucose 6-phosphate

C6717

α-D-mannopyranose 6-phosphate

C6719

β-D-mannopyranose 6-phosphate

C8704

D-xylulose 5-phosphate

C8708

1-deoxy-D-xylulose 5-phosphate

C8700

aldehydo-D-arabinose 5-phosphate

C10604

D-ribulose 5-phosphate

C5615

D-glyceraldehyde 3-phosphate

C6673

sucrose 6F-phosphate

C3138

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

C3137

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C973

D-ribulose-1,5-bisphosphate

C10362

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

C10381

a peptidoglycan dimer (mycobacteria)

C10374

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

C10372

a peptidoglycan dimer (S. aureus)

C10370

a peptidoglycan dimer (E. faecium, tetrapeptide)

C10379

a peptidoglycan dimer (E. faeciums)

C5529

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

C3132

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)5-D-alanyl-D-alanine

C3130

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

C3127

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

C3120

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C3122

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C361

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

C13230

a peptidoglycan dimer (meso-diaminopimelate containing)

C10383

a peptidoglycan with L,D cross-links (mycobacteria)

C10364

a peptidoglycan with D,D cross-links (mycobacteria)

C14591

a peptidoglycan with D,D cross-link (S. aureus)

C14587

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

C8835

β-D-fructofuranose

C2858

glycolaldehyde

C2109

α-D-galactopyranose

C2108

β-D-galactopyranose

C7085

β-D-glucopyranose

C7087

α-D-glucopyranose

C9494

D-glyceraldehyde

C2143

D-xylulose

C9477

N-acetyl-α-D-muramoyl-L-alanine(1-)

C15288

N-acetylmuramate

C14474

N-acetyl-α-D-mannosamine

C5286

N-acetyl-β-D-glucosamine

C4960

N-acetyl-β-neuraminate

C3731

glycerol

C425

D-arabinitol

C6917

β-D-cellobiose

C10688

maltotriose

C10693

sucrose

C6823

α,α-trehalose

C10689

maltotetraose

C10690

maltopentaose

C10691

maltohexaose

C10692

maltoheptaose

C2021

aldehydo-D-galacturonate

C6829

salicylaldehyde

C10621

4-methylumbelliferone

C4655

coumarin

C4615

scopoletin

C11012

phytyl diphosphate

C10966

all-trans-retinol

C3727

all-trans-retinyl palmitate

C4221

(3S)-2,3-epoxy-2,3-dihydrosqualene

C9304

trans,octacis-decaprenyl phosphate

C9075

mono-trans,octa-cis-decaprenyl diphosphate

C6262

(3S)-linalool

C6261

(3R)-linalool

C8321

geranyl diphosphate

C10874

apo-4'-lycopenal

C10880

spirilloxanthin

C10862

15-cis-phytoene

C10864

all-trans-phytoene

C10942

all-trans phytofluene

C8116

spheroiden-2-one

C10905

spheroidene

C10930

all-trans neurosporene

C10935

methoxyneurosporene

C10881

1-hydroxyneurosporene

C10911

demethylspheroidene

C8090

2,2'-dioxospirilloxanthin

C8138

2-oxospirilloxanthin

C5001

apo-4'-lycopenoate

C14417

erythromycin D

C14423

3-α-mycarosylerythronolide B

C666

ferric-enterobactin complex

C668

iron(III) dicitrate

C6830

erythronolide B

C8322

di-trans,octa-cis-undecaprenyl phosphate

C1810

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

C1813

di-trans,octa-cis-undecaprenyl diphosphate

C5383

all-trans-octaprenyl diphosphate

C5378

geranylgeranyl diphosphate

C5382

all-trans-heptaprenyl diphosphate

C4553

3-octaprenyl-4-hydroxybenzoate

C3117

dioleoyl phosphatidate

C10502

1-palmitoyl-2-linoleoyl-phosphatidylcholine

C2741

1-linoleoyl-sn-glycero-3-phosphocholine

C2765

1-oleoyl-2-lyso-glycerone phosphate

C10025

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

C6241

1-oleoyl-sn-glycerol 3-phosphate

C10527

myo-inositol

C10526

1-amino-1-deoxy-scyllo-inositol

C10522

scyllo-inosose

C13576

1D-myo-inositol 1-monophosphate

C13573

1D-myo-inositol 3-monophosphate

C6488

phytate

C6475

D-myo-inositol (1,2,4,5,6)-pentakisphosphate

C2758

3,4-dihydroxyphenylglycolaldehyde

C2763

3,4-dihydroxyphenylglycol

C11421

protocatechuate

C11919

ethylene glycol

C3447

propan-1-ol

C14807

phytol

C3449

butan-1-ol

C3450

ethanol

C3448

methanol

C6090

methylglyoxal

C3641

(4-hydroxyphenyl)acetaldehyde

C3647

phenylacetaldehyde

C3649

benzaldehyde

C14804

phytenal

C6245

(R)-lactaldehyde

C6246

(S)-lactaldehyde

C3523

1-propanal

C3494

isobutanal

C3529

1-octanal

C3485

butan-1-al

C3500

acetaldehyde

C3483

formaldehyde

C10060

(R)-acetoin

C10143

menadione

C10173

pyrroloquinoline quinone

C10048

caldariellaquinone

C2040

diacetyl

C2028

acetone

C3308

pyruvate

C3086

4-(methylsulfanyl)-2-oxobutanoate

C3301

2-oxoglutarate

C3257

2-oxobutanoate

C3351

glyoxylate

C3345

3-phenyl-2-oxopropanoate

C3315

3-(4-hydroxyphenyl)pyruvate

C11429

salicylate

C8974

4-aminobenzoate

C8968

benzoate

C11517

acetate

C11481

orotate

C11482

(R)-pantoate

C2047

aldehydo-D-glucuronate

C4985

(S)-1-pyrroline-5-carboxylate

C3418

butanoate

C3409

octanoate

C3412

decanoate

C3383

palmitate

C6389

γ-linolenate

C10590

α-linolenate

C10572

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

C13210

oleate

C6379

linoleate

C5935

dinor-12-oxo-phytodienoate

C13300

8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate

C13266

(15Z)-tetracosenoate

C13260

phytenate

C3421

formate

C3420

propanoate

C6185

(R)-lactate

C6186

(S)-lactate

C13463

(2R,3S)-2-methylisocitrate

C11476

(R)-glycerate

C8555

cis-homoaconitate

C8544

cis-2-methylaconitate

C8542

(2S,3S)-2-methylcitrate

C8538

(2R)-homocitrate

C8534

cis-aconitate

C8531

D-threo-isocitrate

C5463

3-(carbamoylamino)-2-methylpropanoate

C8950

chorismate

C6443

fumarate

C6442

succinate

C2802

(S)-malate

C7033

6-hydroxy-2-cyclohexen-one-carboxylate

C6908

salicyl-6-hydroxy-2-cyclohexene-on-oyl

C7139

4-tyrosol

C6934

4-hydroxybenzoate

C2569

coumarinate

C12862

4-nitrophenol

C2915

menadiol

C1869

caldariellaquinol

C1868

3-demethylubiquinol-9

C1867

3-demethylubiquinol-8

C1865

3-demethylubiquinol-7

C1866

3-demethylubiquinol-10

C1860

demethylmenaquinol-7

C1857

demethylmenaquinol-6

C1863

demethylmenaquinol-8

C1672

menaquinol-7

C1679

menaquinol-6

C1680

menaquinol-8

C5551

ubiquinol-9

C5543

ubiquinol-8

C5559

ubiquinol-6

C5535

ubiquinol-7

C5563

ubiquinol-10

C8413

indole

C8335

(indol-3-yl)acetaldehyde

C7694

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

C8490

3-methoxy-4-hydroxyphenylglycol

C13354

preQ0

C13366

(indole-3-yl)acetonitrile

C13382

acrylonitrile

C13422

hydrogen cyanide

C13330

(2R)-2-hydroxy-2-methylbutanenitrile

C4190

2-hydroxy-2-methylpropanenitrile

C5590

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

C14603

tetrahydromethanopterin

C12718

molybdopterin

C12702

cyclic pyranopterin phosphate

C12668

molybdopterin adenine dinucleotide

C12708

7,8-dihydroneopterin 3'-phosphate

C12680

(7,8-dihydropterin-6-yl)methyl diphosphate

C12728

6-(hydroxymethyl)-7,8-dihydropterin

C12730

7,8-dihydroneopterin 3'-triphosphate

C12664

7,8-dihydroneopterin

C12696

7,8-dihydromonapterin

C6003

guanylyl molybdenum cofactor

C6007

MoO2-molybdopterin cofactor

C10609

7,8-dihydropteroate

C10597

7,8-dihydrofolate monoglutamate

C10595

N10-formyldihydrofolate

C7134

tetrahydropteroyl tri-L-glutamate

C7129

5,6,7,8-tetrahydrofolate

C4599

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

C8566

5-methyltetrahydropteroyl tri-L-glutamate

C8565

5-methyltetrahydropteroyl mono-L-glutamate

C414

10-formyl-tetrahydrofolate mono-L-glutamate

C6250

5,10-methylenetetrahydropteroyl mono-L-glutamate

C14624

5,10-methylene-tetrahydromethanopterin

C14627

5-formyl-tetrahydromethanopterin

C14606

5,10-methenyltetrahydromethanopterin

C10052

FMN

C10988

riboflavin

C10053

FAD

C10050

FADH2

C10049

FMNH2

C15044

reduced riboflavin

C1659

6,7-dimethyl-8-(1-D-ribityl)lumazine

C2001

hydantoin

C5221

adenosylcobalamin

C9861

cobyrinate

C1705

sirohydrochlorin

C2314

precorrin-3B

C2302

precorrin-3A

C2297

precorrin-8x

C2323

precorrin-7

C9813

cobalt-precorrin-5B

C9871

cobalt-precorrin-5A

C9847

cobalt-precorrin-4

C9822

cobalt-precorrin-3

C9818

cobalt-precorrin-6A

C9842

cobalt-precorrin-6B

C9866

cobalt-precorrin-8

C9837

cobalt-precorrin-7

C2300

precorrin-5

C2320

precorrin-4

C2308

precorrin-6A

C2317

precorrin-6B

C2311

precorrin-2

C2305

precorrin-1

C10982

nicotinate

C10986

L-ascorbate

C10996

nicotinamide

C10994

thiamine

C4214

pyridoxine 5'-phosphate

C4210

pyridoxal 5'-phosphate

C4188

pyridoxamine 5'-phosphate

C4208

pyridoxine

C4200

pyridoxal

C4216

pyridoxamine

C10614

coenzyme A

C5394

(R)-NADHX

C5392

(S)-NADHX

C11516

glycine betaine

C2598

D-glucono-1,5-lactone

C10100

trans-dienelactone

C10102

cis-dienelactone

C10076

L-galactono-1,4-lactone

C5014

phenylacetyl-CoA

C4981

CoA-disulfide

C4935

trans-feruloyl-CoA

C5291

trans-caffeoyl-CoA

C4922

isobutanoyl-CoA

C5306

3-methylcrotonyl-CoA

C4920

isovaleryl-CoA

C5285

(E)-2-methylcrotonoyl-CoA

C2242

(S)-3-aminobutanoyl-CoA

C5315

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

C5313

2-methylbutanoyl-CoA

C4913

malonyl-CoA

C5298

acetyl-CoA

C5186

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

C5182

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

C4901

succinyl-CoA

C5314

2-methylacetoacetyl-CoA

C4937

3'-dephospho-CoA

C4915

α-linolenoyl-CoA

C5056

linoleoyl-CoA

C5635

oleoyl-CoA

C6075

3-oxooctadecanoyl-CoA

C2009

3-oxopentanoyl-CoA

C2008

acetoacetyl-CoA

C6562

hexadecanedioyl-CoA

C5892

palmitoyl-CoA

C2873

pristanoyl-CoA

C14677

octanoyl-CoA

C14697

decanoyl-CoA

C1175

butanoyl-CoA

C1177

propanoyl-CoA

C7168

(Z)-15-tetracosenoyl-CoA

C10774

(3R)-3-hydroxybutanoyl-CoA

C5879

(3R)-3-hydroxyoctadecanoyl-CoA

C7356

(3R)-3-hydroxypentanoyl-CoA

C7343

(S)-malyl-CoA

C11400

phytenoyl-CoA

C1337

crotonyl-CoA

C5919

(S)-methylmalonyl-CoA

C11480

phenylacetate

C9098

methyl (indol-3-yl)acetate

C9096

(indol-3-yl)acetate

C6178

heptadecane

C8043

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

C8025

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

C8014

phosphoribulosylformimino-AICAR-phosphate

C8039

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

C7869

acetamide

C11220

glycerophosphoglycerol

C11219

glycerophosphoserine

C11222

sn-glycero-3-phosphoethanolamine

C2179

choline

C2169

betaine aldehyde

C2183

betaine aldehyde hydrate

C10301

agmatine

C3576

cadaverine

C3574

spermidine

C3548

putrescine

C3544

4-aminobutanal

C6524

2-aminoprop-2-enoate

C6526

(2Z)-2-aminobut-2-enoate

C1689

trimethyl sulfonium

C7014

sulfate

C7016

sulfite

C7017

selenite

C7020

selenate

C7022

selenide

C7024

thiosulfate

C7025

OH-

C7028

nitrite

C7030

nitrate

C7034

hydrogensulfite

C7036

hydrogencarbonate

C7052

trithionate

C7057

molybdate

C8958

superoxide

C6762

phosphonate

C6097

phosphate

C6093

diphosphate

C6094

triphosphate

C7006

chloride

C7864

Fe3+

C4328

ammonium

C4320

H+

C11009

Mg2+

C11011

Cu2+

C11006

Co2+

C11023

Fe2+

C10999

Cd2+

C11019

Ca2+

C11007

Ni2+

C4606

S-(hydroxymethyl)glutathione

C4768

3-(methylsulfanyl)propanal

C4704

methionol

C4734

dimethyl sulfide

C4678

glutathione

C4580

(R)-S-lactoylglutathione

C12637

3-sulfopyruvate

C12587

L-cysteate

C12581

taurine

C5744

5-(2-hydroxyethyl)-4-methylthiazole

C5759

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

C5750

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

C5753

4-methyl-5-(2-phosphooxyethyl)thiazole

C3978

thiocyanate

C3998

methanethiol

C4644

S-sulfanylglutathione

C13088

chloramphenicol 3-acetate

C4658

2,4-dinitrophenyl-S-glutathione

C13114

1-chloro-2,4-dinitrobenzene

C12980

4-nitrophenyl phosphate

C8962

nitric oxide

C8959

monodehydroascorbate radical

C6287

2-octaprenylphenol

C6317

5,10-methenyltetrahydrofolate mono-L-glutamate

C6755

(R)-citramalate

C6644

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

C2150

(2R)-2,3-dihydroxy-3-methylbutanoate

C6437

3-phospho-D-glyceroyl-phosphate

C6427

2,3-diphospho-D-glycerate

C6438

3-phospho-D-glycerate

C6425

2-phospho-D-glycerate

C8419

sn-glycerol 3-phosphate

C7118

hydrogen sulfide

C7121

oxygen

C9850

chlorophyllide a

C9817

3,8-divinyl protochlorophyllide a

C9836

protochlorophyllide a

C2999

chlorophyll a

C7672

coproporphyrinogen I

C7662

uroporphyrinogen-I

C7658

uroporphyrinogen-III

C7666

protoporphyrinogen IX

C9865

Mg-protoporphyrin

C7676

protoporphyrin IX

C9812

magnesium-protoporphyrin IX 13-monomethyl ester

C7632

siroheme

C6624

protoheme

C2255

N2

C9828

cob(II)yrinate a,c-diamide

C9811

cob(II)yrinate c-monoamide

C9800

adenosylcobyrate

C9853

adenosyl-cob(III)yrinate a,c-diamide

C1218

adenosylcobalamin 5'-phosphate

C9830

adenosylcobinamide-GDP

C9823

cob(I)yrinate a,c-diamide

C9869

cob(I)inamide

C9845

cobalt-sirohydrochlorin

C9821

cobalt-factor III

C9835

131-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

C9860

131-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

C9855

adenosyl-cobinamide phosphate

C9807

adenosylcobinamide

C3940

carboxyphosphinopyruvate

C3869

1-carboxyvinyl carboxyphosphonate

C4751

3-(hydroxyphosphinoyl)pyruvate

C10799

DNA with lesion

C4632

(glutathion-S-yl)-4-hydroxy-2-nonenal