an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

autoinducer 2

S-ribosyl-L-homocysteine

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

phosphoenolpyruvate

H₂O

3-dehydroshikimate

3-dehydroquinate

3-deoxy-D-arabino-heptulosonate 7-phosphate

shikimate 3-phosphate

shikimate

5-enolpyruvoyl-shikimate 3-phosphate

CO₂

prephenate

α-D-glucosamine 1-phosphate

oxaloacetate

coproporphyrinogen III

(R)-pantothenate

methylamine

2-succinylbenzoate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2,3-didehydroadipyl-CoA

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

carbamoyl phosphate

L-arginino-succinate

canavaninosuccinate

O-ureido-L-homoserine

xanthine

imidazole acetol-phosphate

D-erythro-imidazole-glycerol-phosphate

urocanate

4-imidazolone-5-propanoate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

isopentenyl diphosphate

prenyl diphosphate

selenophosphate

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

butanoyl phosphate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

preuroporphyrinogen

porphobilinogen

(S)-4-amino-5-oxopentanoate

citrate

2-dehydropantoate

5-amino-6-(D-ribitylamino)uracil

1-deoxy-L-glycero-tetrulose 4-phosphate

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

N-(5-phosphoribosyl)-anthranilate

anthranilate

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

1,4-dihydroxy-2-naphthoyl-CoA

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

isochorismate

1,4-dihydroxy-2-naphthoate

glycerone phosphate

dihydroxyacetone

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

(R)-2,3-dihydroxy-3-methylpentanoate

(2S)-2-isopropylmalate

3-methyl-2-oxobutanoate

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

2-oxovalerate

3-ethylmalate

4-methyl-2-oxopentanoate

(2S)-2-isopropyl-3-oxosuccinate

orotidine 5'-phosphate

(S)-dihydroorotate

urea

L-canaline

L-canavanine

5-(methylsulfanyl)-ribulose 1-phosphate

S-methyl-5-thio-α-D-ribose 1-phosphate

(S)-3-methyl-2-oxopentanoate

nicotinate adenine dinucleotide

β-nicotinate D-ribonucleotide

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

3'-phosphoadenylyl-sulfate

succinate semialdehyde

4-aminobutanoate

3-oxopropanoate

S-methyl-5'-thioadenosine

S-adenosyl 3-(methylsulfanyl)propylamine

L,L-diaminopimelate

(S)-2,3,4,5-tetrahydrodipicolinate

(R)-4'-phosphopantothenoyl-L-cysteine

(R)-4'-phosphopantothenate

4'-phosphopantetheine

2-C-methyl-D-erythritol 4-phosphate

β-D-ribosylnicotinate

hydrogen peroxide

DNA without lesion

γ-butyrobetaine

4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

thiamine diphosphate

luteolin 7-O-β-D-glucuronide

luteolin 7-O-β-D-diglucuronide

luteolin 7-O-[β-D-glucosyluronate-(1,2)-β-D-glucosiduronate]-4'-O-β-D-glucosiduronate

3-keto-β-D-galactose

hydroxypyruvate

3-phosphooxypyruvate

N²-succinyl-L-glutamate 5-semialdehyde

N²-succinyl-L-ornithine

formate

formamide

histidinol

L-histidinol phosphate

N-acetyl-D-muramate 6-phosphate

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

D-gluconate 6-phosphate

6-phospho D-glucono-1,5-lactone

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

4-amino-4-deoxychorismate

histidinal

methylsalicylate

salicyl alcohol

acetoacetate

O-acetyl-L-serine

5-aminolevulinate

itaconate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

4-oxoglutaramate

diacetyl

L-α-amino-ε-keto-pimelate

S-sulfanylglutathione

ammonia

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

(4S)-4-hydroxy-2-oxoheptanedioate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(S)-4-hydroxy-2-oxopentanoate

2-oxopent-4-enoate

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

ethanolamine

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

(E)-2-benzylidenesuccinyl-CoA

methyl-1,4-benzoquinol

2-methyl-1,4-benzoquinone

carbon monoxide

H₂

dimethylsulfoniopropanoate

4-acetamidobutanoate

4-acetamidobutanal

D-glucarate

D-glucurono-6,3-lactone

propynoate

prop-2-ynal

3,4-dihydroxyphenylacetaldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

5-hydroxyindole acetate

5-hydroxyindole acetaldehyde

4-imidazoleacetate

imidazole acetaldehyde

3-oxopristanoyl-CoA

4,8,12-trimethyltridecanoyl-CoA

L-selenocystathionine

2-(α-hydroxyethyl)thiamine diphosphate

oxalosuccinate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

thiamine phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

4-phosphooxy-L-threonine

benzoylsuccinyl-CoA

2-oleoylglycerol

5-methylcytosine

β-D-fructose 2,6-bisphosphate

5-deoxy-α-ribose 1-phosphate

acetyl phosphate

mesaconate

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

1,6-anhydro-N-acetyl-β-muramate

phosphite

hydrogen selenide

(2R)-2-amino-4-oxopentanoate

(2R,4S)-2, 4-diaminopentanoate

5-aminopentanoate

L-proline betaine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-amino-2-methyl-5-pyrimidinemethanol

N⁵-carboxyaminoimidazole ribonucleotide

glutathione disulfide

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

2-iminoacetate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

quinolinate

glutathioselenol

selenodiglutathione

L-homocysteine

4-methylphenol

N-acetyl-L-glutaminyl-L-glutamine amide

N-acetyl-L-glutaminyl-L-glutamine

L-cysteinylglycine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

hypoglycin B

L-alanine

L-phenylalanine

L-isoleucine

glycine

L-proline

L-methionine

L-tryptophan

L-leucine

L-valine

L-cysteine

L-aspartate

L-asparagine

L-glutamate

L-glutamine

L-aspartyl-4-phosphate

L-ornithine

L-threonine

L-tyrosine

L-arginine

L-serine

L-lysine

L-histidine

L-isoglutamine

L-cystathionine

N-carbamoyl-L-aspartate

formyl-L-isoglutamine

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-formimino-L-glutamate

N-methyl-L-glutamate

N⁵-methyl-L-glutamine

L-citrulline

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

L-aspartate 4-semialdehyde

L-homoserine

O-phospho-L-homoserine

L-4-hydroxyglutamate semialdehyde

hypoglycin A

O-succinyl-L-homoserine

L-glutamate-5-semialdehyde

D-ornithine

meso-diaminopimelate

L-selenomethionine

seleno-L-homocysteine

N^ω-phospho-L-arginine

3-phospho-L-serine

O-acetyl-L-homoserine

N-acetyl-L-glutamate

(2S, 3S)-3-methylaspartate

D-glutamate

D-aspartate

D-alanine

D-proline

4-aminobenzoate

β-alanine

(S)-3-amino-2-methylpropanoate

2-iminobutanoate

2-iminopropanoate

2-iminosuccinate

GDP

GTP

ADP

ATP

AMP

GMP

XMP

hypoxanthine

IMP

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

adenylo-succinate

5'-deoxyadenosine

guanosine 3'-monophosphate

adenosine 3'-monophosphate

dATP

dADP

dGTP

dGDP

ITP

IDP

dITP

dIDP

dIMP

XTP

2'-deoxyinosine

2'-deoxyadenosine

pppGpp

ppGpp

2'-deoxyguanosine

dGMP

dAMP

GDP-α-D-mannose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-α-D-glucose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-mannosamine

UDP-α-D-galactose

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

guanine

adenine

uracil

thymine

cytosine

preQ₁

NAD⁺

NADP⁺

NADH

NADPH

cytidine-3'-monophosphate

uridine 3'-monophosphate

cyclic di-3',5'-guanylate

dUMP

dCMP

dTMP

dCDP

dTDP

dUDP

dUTP

dCTP

dTTP

UDP

CDP

β-nicotinamide D-ribonucleotide

UTP

CTP

CMP

UMP

2'-deoxyuridine

thymidine

2'-deoxycytidine

guanosine

adenosine

xanthosine

inosine

cytidine

uridine

5-fluorouracil

5-fluorocytosine

D-gluconate

1-(β-D ribofuranosyl)nicotinamide

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

3'-ketolactose

D-erythrose 4-phosphate

5-phospho-α-D-ribose 1-diphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-sedoheptulose 7-phosphate

4-phospho-D-erythronate

α-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

D-fructose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

sucrose 6^F-phosphate

α,α-trehalose 6-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

a peptidoglycan dimer (mycobacteria)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faecium, tetrapeptide)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with an L,D cross-link (Enterococcus faecium)

β-D-fructofuranose

glycolaldehyde

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

β-D-galactopyranose

β-D-glucopyranose

α-D-glucopyranose

L-glyceraldehyde

β-D-glucuronate

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-α-D-mannosamine

N-acetyl-β-D-mannosamine

N-acetyl-β-D-glucosamine

N-acetyl-β-neuraminate

glycerol

XXXG xyloglucan oligosaccharide

allolactose

sucrose

α-lactose

α,α-trehalose

XLLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XXLG xyloglucan oligosaccharide

salicylaldehyde

all-trans-retinol

all-trans-retinyl palmitate

mono-trans,octa-cis-decaprenyl diphosphate

(2E,6E)-farnesyl diphosphate

trans,octacis-decaprenyl phosphate

(2E,6E)-farnesol

geranyl diphosphate

(3R)-hydroxy-nonanoyl-CoA

2-trans-nonenoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-undecaprenyl diphosphate

all-trans-dodecaprenyl diphosphate

all-trans-tridecaprenyl diphosphate

geranylgeranyl diphosphate

dioleoyl phosphatidate

1-oleoyl-2-lyso-glycerone phosphate

1-oleoyl-sn-glycerol 3-phosphate

myo-inositol

1D-myo-inositol 1-monophosphate

1D-myo-inositol 3-monophosphate

D-myo-inositol (1,4)-bisphosphate

D-myo-inositol (1,3,4,5)-tetrakisphosphate

D-myo-inositol (1,3,4)-trisphosphate

D-myo-inositol (1,4,5)-trisphosphate

protocatechuate

3,4-dihydroxyphenylacetate

3,4-dihydroxymandelate

3,4-dihydroxyphenylglycolaldehyde

butan-1-ol

ethanol

phytol

methanol

(2E,6E)-farnesal

methylglyoxal

benzaldehyde

phytenal

(S)-lactaldehyde

acetaldehyde

1-octanal

butan-1-al

formaldehyde

1-propanal

menadione

caldariellaquinol

caldariellaquinone

2-oxoglutarate

glyoxylate

pyruvate

2-oxobutanoate

5-chloro-4-hydroxy-2-oxopentanoate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

salicylate

benzoate

(R)-pantoate

orotate

acetate

L-carnitine

5-chloro-5-deoxy-D-ribonate

(S)-1-pyrroline-5-carboxylate

pristanate

palmitate

octanoate

butanoate

decanoate

stearate

linoleate

oleate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

α-linolenate

γ-linolenate

(3E,5Z)-tetradecadienoate

phytenate

(15Z)-tetracosenoate

(2E,6E)-farnesoate

3-oxoadipate

propanoate

4-hydroxybutanoate

(2R,3S)-2-methylisocitrate

(R)-glycerate

(S)-lactate

(R)-lactate

cis-aconitate

cis-2-methylaconitate

(2S,3S)-2-methylcitrate

3-carboxy-cis,cis-muconate

cis-homoaconitate

(2R)-homocitrate

D-threo-isocitrate

chorismate

fumarate

succinate

(S)-malate

urate

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

luteolin

menadiol

3-demethylubiquinol-8

demethylmenaquinol-8

demethylmenaquinol-7

demethylmenaquinol-9

demethylmenaquinol-6

demethylmenaquinol-10

demethylmenaquinol-11

demethylmenaquinol-12

demethylmenaquinol-13

menaquinol-13

menaquinol-12

menaquinol-11

menaquinol-10

menaquinol-7

menaquinol-6

menaquinol-9

menaquinol-8

ubiquinol-8

indole

(indol-3-yl)acetaldehyde

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

vanillyl mandelate

preQ₀

cyclic pyranopterin phosphate

molybdopterin adenine dinucleotide

molybdopterin

7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydroneopterin 3'-triphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydromonapterin

7,8-dihydroneopterin

7,8-dihydroneopterin 3'-phosphate

7,8-dihydropteroate

7,8-dihydrofolate monoglutamate

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

FMN

riboflavin

FAD

FMNH₂

FADH₂

6,7-dimethyl-8-(1-D-ribityl)lumazine

thiamine

nicotinate

nicotinamide

adenosylcobalamin

cob(I)alamin

pyridoxamine 5'-phosphate

pyridoxal 5'-phosphate

pyridoxine 5'-phosphate

coenzyme A

(R)-NADHX

(S)-NADHX

glycine betaine

D-glucono-1,5-lactone

3'-dephospho-CoA

methylacrylyl-CoA

(3S)-hydroxyadipyl-CoA

(E)-2-methylcrotonoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-hydroxyisovaleryl-CoA

acetyl-CoA

phenylacetyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

oleoyl-CoA

2-methylacetoacetyl-CoA

L-carnitinyl-CoA

γ-butyrobetainyl-CoA

succinyl-CoA

itaconyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

malonyl-CoA

(2E,5Z)-tetradecenoyl-CoA

isobutanoyl-CoA

4-hydroxybutanoyl-CoA

2-methylbutanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

3-oxoadipyl-CoA

3-oxo-palmitoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxodecanoyl-CoA

3-oxohexanoyl-CoA

3-oxooctanoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

(+)-7-epi-jasmonoyl-CoA

palmitoyl-CoA

stearoyl-CoA

pristanoyl-CoA

octanoyl-CoA

decanoyl-CoA

propanoyl-CoA

butanoyl-CoA

cerotoyl-CoA

(Z)-15-tetracosenoyl-CoA

2-carboxy-cerotoyl-CoA

(S)-malyl-CoA

phytenoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-octadec-2-enoyl-CoA

crotonyl-CoA

(S)-methylmalonyl-CoA

(R)-methylmalonyl-CoA

phenylacetate

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

(+)-7-epi-jasmonate

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

agmatine

spermidine

putrescine

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

selenide

hydrogencarbonate

selenate

sulfite

superoxide

hydrogensulfite

nitrate

sulfate

molybdate

selenite

phosphonate

phosphate

diphosphate

triphosphate

ammonium

H⁺

Fe²⁺

Na⁺

Mg²⁺

trimethyl sulfonium

Ni²⁺

Mo²⁺

Co²⁺

Zn²⁺

Mn²⁺

Pb²⁺

Hg²⁺

Cd²⁺

Fe³⁺

3-dimethylsulfoniopropionaldehyde

dimethyl sulfide

S-(hydroxymethyl)glutathione

glutathione

(2R)-phospho-3-sulfolactate

3-sulfopyruvate

L-cysteate

(2R)-3-sulfolactate

4-methyl-5-(2-phosphooxyethyl)thiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

5-(2-hydroxyethyl)-4-methylthiazole

(S)-3-hydroxy-isobutanoate

5,10-methenyltetrahydrofolate mono-L-glutamate

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

(S)-citramalate

N-acetyl-D-mannosamine 6-phosphate

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

hydrogen sulfide

protochlorophyllide a

chlorophyllide a

3,8-divinyl protochlorophyllide a

coproporphyrinogen I

uroporphyrinogen-I

uroporphyrinogen-III

protoporphyrin IX

protoporphyrinogen IX

Mg-protoporphyrin

magnesium-protoporphyrin IX 13-monomethyl ester

protoheme

oxygen

adenosylcobinamide

cob(I)inamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

DNA with lesion