an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

H₂O

CO₂

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

glycerone phosphate

phosphoenolpyruvate

oxaloacetate

5-methylcytosine

(S)-2-amino-6-oxohexanoate

xanthine

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

succinate semialdehyde

urocanate

4-imidazolone-5-propanoate

hydrogenobyrinate a,c-diamide

acetoacetate

L-β-lysine

(S)-5-amino-3-oxohexanoate

(3S,5S)-3,5-diaminohexanoate

coproporphyrinogen III

3-methyl-2-oxobutanoate

4-methyl-2-oxopentanoate

(S)-3-methyl-2-oxopentanoate

(R)-pantothenate

(R)-4'-phosphopantothenate

α-D-ribose 1,5-bisphosphate

carbon monoxide

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

1-deoxy-L-glycero-tetrulose 4-phosphate

DNA without lesion

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

norspermidine

carboxynorspermidine

carboxyphosphate

carbamoyl phosphate

mesaconate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

3-phosphooxypyruvate

2-dehydropantoate

(S)-2-aceto-2-hydroxybutanoate

(R)-2,3-dihydroxy-3-methylpentanoate

1-piperideine 6-carboxylate

aminoacetone

1,2-dihydro-β-NADP

ammonia

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

carbamate

L-methionine

glycine

L-aspartate

L-tryptophan

L-glutamate

L-glutamine

L-histidine

L-serine

L-lysine

L-isoleucine

L-threonine

L-valine

L-leucine

L-tyrosine

L-alanine

S-adenosyl-L-methionine

L-homoserine

L-homocysteine

L-2-amino-3-oxobutanoate

L-saccharopine

O-acetyl-L-homoserine

(2S, 3S)-3-methylaspartate

3-phospho-L-serine

(R)-β-lysine

β-alanine

acetate

(R)-pantoate

4-hydroxybutanoate

(R)-lactate

(R)-glycerate

pyruvate

formate

propanoate

2-oxobutanoate

2-oxoglutarate

fumarate

succinate

(S)-malate

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-mannose

GDP-β-L-fucose

UDP-α-D-galactose

UDP-α-D-glucose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-glucosamine

5-phospho-α-D-ribose 1-diphosphate

α-D-galactose 1-phosphate

α-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

sucrose 6^G-phosphate

D-ribulose-1,5-bisphosphate

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

β-D-fructofuranose

β-D-galactopyranose

α-D-galactopyranose

D-glyceraldehyde

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

maltopentaose

maltohexaose

maltotriose

maltotetraose

maltoheptaose

methylglyoxal

acetaldehyde

caldariellaquinone

caldariellaquinol

phenol

indole

adenine

guanine

AMP

XMP

IMP

GMP

GTP

ATP

ADP

GDP

dADP

dGDP

dATP

dGTP

hypoxanthine

adenosine

inosine

guanosine

xanthosine

2'-deoxyinosine

2'-deoxyguanosine

2'-deoxyadenosine

7,8-dihydroneopterin 3'-triphosphate

uracil

cytosine

thymine

preQ₁

dTMP

dUMP

dUTP

CTP

UTP

dUDP

CDP

dCDP

dTDP

dTTP

dCTP

5-fluorouracil

cob(I)alamin

adenosylcobalamin

coenzyme A

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

5'-deoxyadenosine

adenylo-succinate

NADP⁺

NAD⁺

NADPH

NADH

5'-deoxy-5'-fluoroadenosine

5-fluorocytosine

(S)-NADHX

(R)-NADHX

succinyl-CoA

acetyl-CoA

4-hydroxybutanoyl-CoA

(S)-3-aminobutanoyl-CoA

3'-dephospho-CoA

acetoacetyl-CoA

propanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

crotonyl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

glutathione

(R)-S-lactoylglutathione

thiocyanate

2-aminoprop-2-enoate

2-iminopropanoate

sulfite

thiosulfate

hydrogencarbonate

hydrogensulfite

phosphate

diphosphate

triphosphate

Mg²⁺

Co²⁺

Fe²⁺

ammonium

H⁺

hydrogen cyanide

preQ₀

α-D-glucosamine 6-phosphate

3-phospho-D-glyceroyl-phosphate

3-phospho-D-glycerate

2-phospho-D-glycerate

hydrogen sulfide

Mg-protoporphyrin

protoporphyrin IX

protoporphyrinogen IX

uroporphyrinogen-III

protoheme

cob(II)yrinate a,c-diamide

adenosylcobinamide

cob(I)inamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

DNA with lesion