ID Name References
C1

an oxidized electron donor

C2

a reduced electron donor

C3

a deaminated amino group acceptor

C4

an aminated amino group acceptor

C5

Charged-LEU-tRNAs

C6

LEU-tRNAs

C7

a 2-oxo acid

C8

an amino acid

C9

an acyl-CoA

C10

a carboxylate

C11

an oxidized ferredoxin [iron-sulfur] cluster

C12

a reduced ferredoxin [iron-sulfur] cluster

C13

NAD(P)H

C14

NAD(P)+

C15

an L-tyrosyl-[tRNAtyr]

C16

a tRNAtyr

C17

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

C18

4α,14α-dimethyl-porifersta-8,25(27)-dienol

C24

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

C26

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

C27

isoshowacene

C29

2-hydroxyhexadecanal

C30

16-sinapoyloxypalmitate

C31

3-methylquinolin-2-ol

C32

(22R)-hydroxycholesterol

C37

N-(2-methylpropyl)hydroxylamine

C38

chloroeremomycin

C39

3-hydroxy-3-methylbutanoate

C40

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C41

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C42

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C43

rhamnosyl tetracyclic spinosyn pseudoaglycone

C44

rhamnosyl tricyclic spinosyn pseudoaglycone

C45

spinosyn tricyclic macrolactone

C46

11-dehydro-15-oxo spinosyn macrolactone

C47

15-oxo spinosyn macrolactone

C48

spinosyn macrolactone

C51

diethylamine N-oxide

C52

triethylamine N-oxide

C53

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

C55

nitroxyl

C57

trans,octacis-decaprenylphospho-β-D-arabinofuranose

C58

1,3-dihydro-2H-imidazol-2-one

C63

2-phenylethyl β-D-glucopyranoside

C64

formyl hopane

C65

ribosyl hopane

C66

adenosyl hopane

C70

(2Z)-2-hydroxypenta-2,4-dienoate

C72

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

C73

(2Z)-2,4-dihydroxypent-2-enoate

C75

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

C76

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

C77

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

C79

(+)-3'-hydroxylarreatricin

C80

(+)-larreatricin

C81

2-trans,4-trans-xanthoxin

C11543

H2O

C1503

2-dehydro-3-deoxy-D-gluconate 6-phosphate

C7865

urea

C6574

(S)-ureidoglycolate

C928

CO2

C11634

tartronate semialdehyde

C1538

2-C-methyl-D-erythritol 4-phosphate

C1002

anthranilate

C1438

(2S)-2-isopropylmalate

C3262

3-methyl-2-oxobutanoate

C996

adenosine 5'-phosphosulfate

C192

adenosine 5'-phosphoselenate

C3319

4-methyl-2-oxopentanoate

C3417

(S)-3-methyl-2-oxopentanoate

C12162

hydrogen peroxide

C10349

glycerone phosphate

C1427

5-enolpyruvoyl-shikimate 3-phosphate

C2586

(E)-4-coumaroyl-CoA

C371

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

C15306

2,3-didehydroadipyl-CoA

C12256

ethylamine

C11887

N-isopropylammelide

C12150

hydroxyatrazine

C1429

3-deoxy-D-arabino-heptulosonate 7-phosphate

C11479

phosphoenolpyruvate

C13895

(2,3-dihydroxybenzoyl)adenylate

C12005

(L-aspartyl)adenylate

C6444

oxaloacetate

C891

citrate

C1454

2,5-didehydro-D-gluconate

C3295

2-keto-D-gluconate

C11639

succinate semialdehyde

C1321

4-aminobutanoate

C6349

3-oxopropanoate

C12352

(S)-dihydroorotate

C11812

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

C11774

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

C1231

5-aminolevulinate

C12214

(S)-4-amino-5-oxopentanoate

C12218

α-D-glucosamine 1-phosphate

C11693

(indol-3 yl)acetyl-CoA

C8333

(indol-3-yl)pyruvate

C12048

γ-L-glutamyl 5-phosphate

C2191

carbamoyl phosphate

C1180

N1-(5-phospho-β-D-ribosyl)glycinamide

C1184

5-phospho-β-D-ribosylamine

C11767

porphobilinogen

C933

L-canavanine

C932

canavaninosuccinate

C12056

L-arginino-succinate

C12326

1-deoxy-L-glycero-tetrulose 4-phosphate

C6361

acetoacetate

C1196

S-methyl-5'-thioadenosine

C11688

S-adenosyl 3-(methylsulfanyl)propylamine

C1285

4-imidazolone-5-propanoate

C873

coproporphyrinogen III

C1528

2-dehydropantoate

C6359

(S)-2-acetolactate

C6369

(S)-2-aceto-2-hydroxybutanoate

C1621

(R)-2,3-dihydroxy-3-methylpentanoate

C1172

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

C1171

2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine

C12370

2-dehydro-3-deoxy-D-galactonate 6-phosphate

C11874

N-succinyl-2-amino-6-ketopimelate

C12368

(S)-2,3,4,5-tetrahydrodipicolinate

C9422

nicotinate adenine dinucleotide

C11715

quinolinate

C11857

β-nicotinate D-ribonucleotide

C1024

aminoacetone

C1449

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

C12158

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

C14924

carboxyphosphate

C11557

urocanate

C11826

oxalosuccinate

C11832

orotidine 5'-phosphate

C1431

3-dehydroshikimate

C11653

shikimate

C14074

prenyl diphosphate

C12364

isopentenyl diphosphate

C11873

N-succinyl-L,L-2,6-diaminopimelate

C14003

N-acetyl-L-glutamate 5-semialdehyde

C1530

(2R,3S)-3-isopropylmalate

C13417

2-isopropylmaleate

C3259

2-oxovalerate

C506

3-ethylmalate

C13786

(2S)-2-isopropyl-3-oxosuccinate

C14053

S-methyl-5-thio-α-D-ribose 1-phosphate

C3656

D-gluconate 6-phosphate

C3307

6-amino-2-oxohexanoate

C6605

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

C11836

hydroxypyruvate

C12176

histidinol

C12044

L-histidinol phosphate

C10794

lipid A disaccharide (E. coli)

C949

lipid X

C1161

6-carboxyhex-2-enoyl-CoA

C13950

pimeloyl-CoA

C11760

prephenate

C10261

ADP-L-glycero-β-D-manno-heptose

C12337

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

C12096

isochorismate

C1102

O-acetyl-L-serine

C13649

N-ethylammeline

C13650

deethylsimazine

C11483

glycolate

C11493

2-phosphoglycolate

C223

3-(4-deoxy-β-D-gluc-4-enuronosyl)-N-acetyl-D-glucosamine

C3322

(4Z)-2-oxohept-4-enedioate

C13672

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

C14111

4-pyridoxolactone

C11895

N-Formyl-L-kynurenine

C1363

(4,5-dihydro-5-oxofuran-2-yl)-acetate

C13689

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

C571

4-hydroxy-2-nonenal

C10260

ADP-D-glycero-β-D-manno-heptose

C1202

(S)-5-hydroxyisourate

C11539

xanthine

C232

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

C11995

(L-seryl)adenylate

C1268

(R)-4'-phosphopantothenate

C295

(R)-4-phosphopantoate

C11946

N-(5-phosphoribosyl)-anthranilate

C12494

N-acetyl-D-muramate 6-phosphate

C12492

1,6-anhydro-N-acetyl-β-muramate

C12393

D-glycero-β-D-manno-heptose 1-phosphate

C12392

D-glycero-β-D-manno-heptose 1,7-bisphosphate

C12848

N5-carboxyaminoimidazole ribonucleotide

C1018

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

C1020

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

C11606

thiamine phosphate

C191

L-selenocystathionine

C645

2-methyl-4-chlorophenol

C14181

2-maleylacetate

C3888

7-carboxy-7-deazaguanine

C13850

hydrogenobyrinate a,c-diamide

C13851

hydrogenobyrinate

C6099

lipid IVA

C3850

5-amino-6-(D-ribitylamino)uracil

C11604

thiamine diphosphate

C927

carbon monoxide

C1480

2-protocatechuoylphloroglucinolcarboxylate

C11652

shikimate 3-phosphate

C13635

β-D-ribosylnicotinate

C473

(2-hydroxyphenyl)acetate

C12171

homogentisate

C3269

(S)-4-hydroxy-2-oxopentanoate

C3279

2-oxopent-4-enoate

C12192

carbonic acid

C11794

3'-phosphoadenylyl-sulfate

C13627

DNA without lesion

C6614

O-ureido-L-homoserine

C11711

(R)-1-amino-2-propanol O-2-phosphate

C11930

N-acetylglutamyl-phosphate

C3684

3-deoxy-α-D-manno-2-octulosonate

C13225

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

C1391

3-mercaptopyruvate

C11737

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

C12230

formamide

C12369

3-dehydroquinate

C11800

(R)-pantothenate

C12486

N-ethylsuccinimide

C11899

N-ethylmaleimide

C352

2-iminoacetate

C13196

methyl-1,4-benzoquinol

C13197

2-methyl-1,4-benzoquinone

C12178

histidinal

C12125

imidazole acetol-phosphate

C12390

D-erythro-imidazole-glycerol-phosphate

C1182

N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide

C12443

pregn-5-ene-3,20-dione

C12444

pregn-5-ene-3,20-dione-17-ol

C1072

5-α-androstan-3β,17β-diol

C12442

5-androstene-3,17-dione

C11802

4'-phosphopantetheine

C1325

4-amino-4-deoxychorismate

C11754

propanoyl phosphate

C15013

2-aminoacetaldehyde

C12254

ethanolamine

C15282

D-galactosamine-6-phosphate

C11932

N-acetyl-D-galactosamine 6-phosphate

C3314

2-dehydro-3-deoxy-D-galactonate

C2580

methylsalicylate

C15056

salicyl alcohol

C11654

selenophosphate

C1353

3-phosphooxypyruvate

C1407

3-hydroxypropanoate

C1548

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

C1631

3-amino-1-hydroxyacetone 1-phosphate

C1265

4-phosphooxy-L-threonine

C12074

3-deoxy-D-manno-octulosonate 8-phosphate

C12139

preuroporphyrinogen

C11868

N2-succinyl-L-ornithine

C14075

N2-succinyl-L-arginine

C11869

N2-succinylglutamate

C13638

N2-succinyl-L-glutamate 5-semialdehyde

C13793

(2R,3S)-3-methylmalate

C1491

citraconate

C1130

8-amino-7-oxononanoate

C4620

S-formylglutathione

C8327

L-dopachrome

C12324

autoinducer 2

C12029

S-ribosyl-L-homocysteine

C4674

glutathione disulfide

C13854

hydrogen selenide

C13533

5-formyl-3-hydroxy-2-methylpyridine-4-carboxylate

C14217

3-hydroxy-2-methylpyridine-4,5-dicarboxylate

C606

3-hydroxy-2-methylpyridine-5-carboxylate

C13941

(2Z)-2-(acetamidomethylene)succinate

C13648

N-ethylammelide

C12090

isopropylamine

C4688

glutathioselenol

C4690

selenodiglutathione

C1271

4-oxoglutaramate

C1223

5-aminopentanoate

C585

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C12054

L-dehydro-ascorbate

C9431

1,2-dihydro-β-NADP

C583

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C12274

enol-phenylpyruvate

C1010

ammonia

C13901

1-pyrroline

C8348

5,6-dihydroxyindole

C12367

1-piperideine-2-carboxylate

C582

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C158

cyclic-2,3-O-oxalyl-L-threonate

C435

bisorganyltrisulfane

C584

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C163

dehydroascorbate (bicyclic form)

C162

cyclic- 3,4-O-oxalyl-L-threonate

C14153

2,3-dioxo-L-gulonate

C159

2-carboxy-L-xylonolactone

C160

2-carboxy-L-threo-pentonate

C6530

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C1328

L-cysteinylglycine

C8518

γ-L-glutamyl-L-cysteine

C1434

D-alanyl-D-alanine

C2576

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

C2562

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

C11520

hypoglycin B

C5032

carbamate

C3530

L-2-aminoadipate

C3536

L-α-amino-ε-keto-pimelate

C12303

L-citrulline

C5607

L-glutamate

C5609

L-glutamine

C5588

L-leucine

C5603

L-isoleucine

C5571

L-valine

C5575

L-tryptophan

C5597

L-alanine

C5596

L-aspartate

C12067

glycine

C5642

L-arginine

C5581

L-proline

C5577

L-threonine

C2469

L-phenylalanine

C5605

L-histidine

C5579

L-serine

C5573

L-tyrosine

C5584

L-lysine

C5612

L-cysteine

C5583

L-methionine

C12247

L-homocysteine

C12203

S-adenosyl-L-homocysteine

C15292

S-adenosyl-L-methionine

C12229

O-phospho-L-homoserine

C12239

L-aspartate 4-semialdehyde

C12245

L-homoserine

C12231

L-ornithine

C12227

O-succinyl-L-homoserine

C12261

hypoglycin A

C12237

L-canaline

C12233

L-glutamate-5-semialdehyde

C12235

L-dopa

C2488

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

C5585

meso-diaminopimelate

C12201

L-2-amino-3-oxobutanoate

C12073

L-aspartyl-4-phosphate

C12063

seleno-L-homocysteine

C11955

O-acetyl-L-homoserine

C10821

trans-4-hydroxy-L-proline

C8820

cis-4-hydroxy-D-proline

C4740

S-methyl-L-methionine

C3652

L-threonine 3-O-phosphate

C3402

3-phospho-L-serine

C5476

formyl-L-isoglutamine

C15000

N-acetyl-L-ornithine

C5466

N-formimino-L-glutamate

C14973

N-acetyl-L-glutamate

C14976

N-acetyl-L-methionine

C13322

N-carbamoyl-L-aspartate

C5595

L-cystathionine

C5580

L,L-diaminopimelate

C5618

L-2,4-diaminobutanoate

C5601

L-isoglutamine

C8799

D-alanine

C8797

D-glutamate

C8807

D-lysine

C11441

β-alanine

C11433

(S)-3-amino-2-methylpropanoate

C11409

2,3-dihydroxybenzoate

C11429

salicylate

C11421

protocatechuate

C8974

4-aminobenzoate

C11517

acetate

C7685

allantoate

C11481

orotate

C11482

(R)-pantoate

C11510

5-chloro-5-deoxy-D-ribonate

C11485

D-gluconate

C4985

(S)-1-pyrroline-5-carboxylate

C3743

4-deoxy-L-threo-hex-4-enopyranuronate

C2774

pristanate

C3207

7-hydroxylaurate

C3415

laurate

C3409

octanoate

C3412

decanoate

C3387

stearate

C3383

palmitate

C550

18-hydroxystearate

C553

16-hydroxypalmitate

C538

18-hydroxyoleate

C13260

phytenate

C13210

oleate

C13266

(15Z)-tetracosenoate

C6379

linoleate

C10590

α-linolenate

C11212

(R)-3-hydroxybutanoate

C13463

(2R,3S)-2-methylisocitrate

C6185

(R)-lactate

C11476

(R)-glycerate

C3308

pyruvate

C3421

formate

C3420

propanoate

C3351

glyoxylate

C3301

2-oxoglutarate

C3257

2-oxobutanoate

C3086

4-(methylsulfanyl)-2-oxobutanoate

C3337

5-chloro-4-hydroxy-2-oxopentanoate

C3345

3-phenyl-2-oxopropanoate

C3315

3-(4-hydroxyphenyl)pyruvate

C6371

3-oxoadipate

C8542

(2S,3S)-2-methylcitrate

C8544

cis-2-methylaconitate

C8534

cis-aconitate

C8536

3-carboxy-cis,cis-muconate

C8531

D-threo-isocitrate

C8950

chorismate

C3316

(3E)-2-oxohex-3-enedioate

C8923

α,ω-9Z-octadecenedioate

C6442

succinate

C6443

fumarate

C2802

(S)-malate

C8039

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

C8043

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

C8014

phosphoribulosylformimino-AICAR-phosphate

C8025

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

C8033

5-amino-4-imidazolecarboxyamide

C9539

(S)-(+)-allantoin

C11313

6-aminopenicillanate

C1599

penicillin G

C1626

isopenicillin N

C10234

(heptosyl)2-Kdo2-lipid A

C10235

heptosyl-Kdo2-lipid A

C10226

α-Kdo-(2→6)-lipid IVA

C10223

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IVA

C4819

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

C4821

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

C4047

3-oxo-24-ethyl-cholest-4-ene

C3955

3-oxo-24-ethyl-cholest-5-ene

C3727

all-trans-retinyl palmitate

C10966

all-trans-retinol

C9077

(2E,6E)-farnesyl diphosphate

C9304

trans,octacis-decaprenyl phosphate

C8321

geranyl diphosphate

C2727

enterobactin

C668

iron(III) dicitrate

C9642

leucodopachrome

C5154

(3E)-tetradec-3-enoyl-CoA

C5156

(2E,4E)-tetradeca-2,4-dienoyl-CoA

C5139

(3E)-undec-3-enoyl-CoA

C5128

2-trans, 4-trans-undecadienoyl-CoA

C5141

2-trans, 4-cis-undecadienoyl-CoA

C4334

1-oleoyl-2-palmitoyl-phosphatidylglycerol

C5904

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

C4553

3-octaprenyl-4-hydroxybenzoate

C8322

di-trans,octa-cis-undecaprenyl phosphate

C5383

all-trans-octaprenyl diphosphate

C1813

di-trans,octa-cis-undecaprenyl diphosphate

C3682

D-galactonate

C4086

1-(β-D ribofuranosyl)nicotinamide

C4068

5-dehydro-4-deoxy-D-glucuronate

C11619

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

C2151

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

C10263

ADP-α-D-glucose

C10343

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C8423

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C1896

dTDP-4-dehydro-β-L-rhamnose

C1930

dTDP-β-L-rhamnose

C1939

dTDP-α-D-glucose

C7742

UDP-N-acetyl-α-D-muramoyl-L-alanine

C7822

UDP-N-acetyl-α-D-muramate

C7808

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

C7734

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

C7780

UDP-α-D-glucose

C7776

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

C7782

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

C7814

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

C7824

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

C7722

UDP-α-D-glucuronate

C5849

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

C8666

UDP-α-D-galactose

C7804

UDP-α-D-galactofuranose

C7444

UDP-N-acetyl-α-D-glucosamine

C5150

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

C5094

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C5090

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C5848

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C6744

CMP-N-acetyl-β-neuraminate

C8305

CMP-3-deoxy-β-D-manno-octulosonate

C10340

D-erythrose 4-phosphate

C15289

D-sedoheptulose 7-phosphate

C10350

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

C10338

5-phospho-α-D-ribose 1-diphosphate

C8811

α-D-glucopyranose 1-phosphate

C3186

N-acetyl-α-D-glucosamine 1-phosphate

C2082

β-D-fructofuranose 1-phosphate

C2129

β-D-glucopyranose 1-phosphate

C2989

β-D-fructofuranose 6-phosphate

C10326

β-D-fructose 1,6-bisphosphate

C10324

D-tagatofuranose 1,6-bisphosphate

C10323

D-tagatofuranose 6-phosphate

C15303

D-fructose 6-phosphate

C10328

keto-L-tagatose 6-phosphate

C2057

α-D-ribose-1-phosphate

C2056

2-deoxy-α-D-ribose 1-phosphate

C8708

1-deoxy-D-xylulose 5-phosphate

C8704

D-xylulose 5-phosphate

C8699

D-arabinofuranose 5-phosphate

C10604

D-ribulose 5-phosphate

C5615

D-glyceraldehyde 3-phosphate

C3137

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C3138

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

C10362

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

C10370

a peptidoglycan dimer (E. faecium, tetrapeptide)

C10372

a peptidoglycan dimer (S. aureus)

C10379

a peptidoglycan dimer (E. faeciums)

C5529

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

C3130

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

C3120

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C3132

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)5-D-alanyl-D-alanine

C3127

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

C13222

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

C13226

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

C2108

β-D-galactopyranose

C2063

β-D-ribopyranose

C9494

D-glyceraldehyde

C2065

aldehydo-D-ribose

C2062

β-D-ribofuranose

C2061

α-D-ribofuranose

C2858

glycolaldehyde

C15288

N-acetylmuramate

C9477

N-acetyl-α-D-muramoyl-L-alanine(1-)

C5286

N-acetyl-β-D-glucosamine

C13570

N-acetyl-β-D-mannosamine

C14474

N-acetyl-α-D-mannosamine

C4960

N-acetyl-β-neuraminate

C3731

glycerol

C5754

5-chloro-3-methylcatechol

C5768

3,5-dichlorocatechol

C10527

myo-inositol

C13573

1D-myo-inositol 3-monophosphate

C13576

1D-myo-inositol 1-monophosphate

C6488

phytate

C6475

D-myo-inositol (1,2,4,5,6)-pentakisphosphate

C3450

ethanol

C3448

methanol

C6090

methylglyoxal

C3483

formaldehyde

C3500

acetaldehyde

C10143

menadione

C10148

dopaquinone

C10048

caldariellaquinone

C2040

diacetyl

C7041

toluene

C7033

6-hydroxy-2-cyclohexen-one-carboxylate

C6908

salicyl-6-hydroxy-2-cyclohexene-on-oyl

C3093

urate

C6934

4-hydroxybenzoate

C6918

cyanuric acid

C4356

quercetin

C2915

menadiol

C2883

all trans-decaprenyl-2-methoxy-6-1,4-benzoquinol

C2879

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

C1869

caldariellaquinol

C1867

3-demethylubiquinol-8

C5543

ubiquinol-8

C9501

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

C9503

6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol

C5677

2,4-dichlorophenol

C6043

4-methylphenol

C8413

indole

C7694

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

C4930

atrazine

C9455

guanine

C9454

adenine

C7809

AMP

C7827

GMP

C7811

XMP

C7741

IMP

C7844

ATP

C7745

GTP

C7759

ITP

C7757

ADP

C7795

GDP

C7817

IDP

C7807

dGDP

C7823

dADP

C7747

dIDP

C7743

dAMP

C7840

dGMP

C7783

dATP

C7751

dGTP

C7749

dITP

C7785

hypoxanthine

C15088

adenosine

C15091

inosine

C15085

guanosine

C15094

xanthosine

C7848

2'-deoxyguanosine

C12742

7,8-dihydrolumazine

C5066

(6R)-L-erythro-5,6,7,8-tetrahydrobiopterin

C14603

tetrahydromethanopterin

C5578

6-carboxy-5,6,7,8-tetrahydropterin

C5582

(6R)-4a-hydroxy-tetrahydrobiopterin

C12728

6-(hydroxymethyl)-7,8-dihydropterin

C12696

7,8-dihydromonapterin

C12664

7,8-dihydroneopterin

C12714

7,8-dihydropterin

C12676

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

C12726

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

C12680

(7,8-dihydropterin-6-yl)methyl diphosphate

C12730

7,8-dihydroneopterin 3'-triphosphate

C10609

7,8-dihydropteroate

C14624

5,10-methylene-tetrahydromethanopterin

C10597

7,8-dihydrofolate monoglutamate

C7134

tetrahydropteroyl tri-L-glutamate

C8566

5-methyltetrahydropteroyl tri-L-glutamate

C6003

guanylyl molybdenum cofactor

C6007

MoO2-molybdopterin cofactor

C1659

6,7-dimethyl-8-(1-D-ribityl)lumazine

C10050

FADH2

C15044

reduced riboflavin

C10049

FMNH2

C10988

riboflavin

C10053

FAD

C10052

FMN

C10601

thymine

C8739

uracil

C9540

preQ1

C7649

isoguanine

C8750

cytidine 2',3'-cyclic monophosphate

C8747

uridine 2'3'-cyclic monophosphate

C8770

dUMP

C8724

dUTP

C8760

UTP

C8761

CTP

C8772

dCTP

C8732

CDP

C8733

dCDP

C8714

UDP

C8752

dUDP

C6462

uridine 3'-monophosphate

C6460

cytidine-3'-monophosphate

C8764

dTTP

C8720

dTDP

C8744

dTMP

C8755

dCMP

C2241

UMP

C2245

CMP

C2702

cytidine

C2706

uridine

C2519

thymidine

C2527

2'-deoxyuridine

C2523

2'-deoxycytidine

C9874

cob(I)alamin

C5221

adenosylcobalamin

C9861

cobyrinate

C10614

coenzyme A

C7645

guanosine 2',3'-cyclic monophosphate

C7841

adenosine 2',3'-cyclic monophosphate

C10288

adenylo-succinate

C5485

1-(5-phospho-β-D-ribosyl)-ATP

C5489

1-(5-phospho-β-D-ribosyl)-AMP

C7641

adenosine 3'-monophosphate

C7653

guanosine 3'-monophosphate

C5552

5'-deoxyadenosine

C7652

cyclic-AMP

C10266

ppGpp

C10267

pppGpp

C7643

cyclic-GMP

C7655

8-oxo-GTP

C7647

8-oxo-dGTP

C9443

2-methylsulfanyl-N6-dimethylallyladenosine37 in tRNA

C9444

2-sulfanyl-N6-dimethylallyladenosine37 in tRNA

C4243

β-nicotinamide D-ribonucleotide

C10280

5-hydroxy-CMP

C10290

5-hydroxy-CTP

C10284

2-hydroxy-dATP

C1817

cyclic di-3',5'-guanylate

C4020

NAD+

C4018

NADP+

C14500

NADH

C14497

NADPH

C1804

P1,P4-bis(5'-adenosyl) tetraphosphate

C5392

(S)-NADHX

C5394

(R)-NADHX

C12545

ethene

C9096

(indol-3-yl)acetate

C9098

methyl (indol-3-yl)acetate

C11480

phenylacetate

C12483

campesterol

C6218

(+)-7-epi-jasmonate

C11744

17-β-hydroxy-5-α-androstan-3-one

C10546

progesterone

C4498

cholest-4-en-3-one

C11726

campest-4-en-3β-ol

C10542

androst-4-ene-3,17-dione

C11761

17-α-hydroxyprogesterone

C11346

cholest-5-en-3-one

C11342

cholesterol

C5298

acetyl-CoA

C4911

methylacrylyl-CoA

C5274

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

C5272

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

C5285

(E)-2-methylcrotonoyl-CoA

C5310

3-hydroxyisovaleryl-CoA

C5279

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

C5278

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

C5315

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

C5308

(3S)-hydroxyadipyl-CoA

C5266

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

C5265

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

C4913

malonyl-CoA

C4901

succinyl-CoA

C5314

2-methylacetoacetyl-CoA

C5311

(S)-3-hydroxy-3-methylglutaryl-CoA

C5056

linoleoyl-CoA

C4915

α-linolenoyl-CoA

C5306

3-methylcrotonyl-CoA

C4920

isovaleryl-CoA

C4899

3-methylglutaconyl-CoA

C4937

3'-dephospho-CoA

C5260

(+)-7-epi-jasmonoyl-CoA

C5313

2-methylbutanoyl-CoA

C4922

isobutanoyl-CoA

C11197

(S)-3-hydroxy-isobutanoyl-CoA

C11400

phytenoyl-CoA

C10623

phytanoyl-CoA

C4299

(2E)-oct-2-enoyl-CoA

C4309

(2E)-dec-2-enoyl-CoA

C4300

trans-Δ2, cis-Δ4-decadienoyl-CoA

C11399

(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA

C11402

(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA

C1337

crotonyl-CoA

C3150

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

C5635

oleoyl-CoA

C2009

3-oxopentanoyl-CoA

C2008

acetoacetyl-CoA

C6566

16-hydroxypalmitoyl-CoA

C5885

stearoyl-CoA

C5892

palmitoyl-CoA

C480

18-hydroxystearoyl-CoA

C491

18-hydroxyoleoyl-CoA

C11187

7-hydroxylauroyl-CoA

C14674

lauroyl-CoA

C14677

octanoyl-CoA

C14697

decanoyl-CoA

C1177

propanoyl-CoA

C2873

pristanoyl-CoA

C3141

2-hydroxyphytanoyl-CoA

C7168

(Z)-15-tetracosenoyl-CoA

C7353

(S)-3-hydroxydecanoyl-CoA

C10775

(S)-3-hydroxybutanoyl-CoA

C7152

(3S,6Z,9Z,12Z,15Z,18Z)-3-hydroxytetracosapentaenoyl-CoA

C7149

(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA

C15307

(S)-3-hydroxyoctanoyl-CoA

C2598

D-glucono-1,5-lactone

C10100

trans-dienelactone

C10102

cis-dienelactone

C4606

S-(hydroxymethyl)glutathione

C4678

glutathione

C4580

(R)-S-lactoylglutathione

C12581

taurine

C12637

3-sulfopyruvate

C12587

L-cysteate

C5753

4-methyl-5-(2-phosphooxyethyl)thiazole

C5750

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

C3998

methanethiol

C3978

thiocyanate

C4644

S-sulfanylglutathione

C7057

molybdate

C7020

selenate

C7036

hydrogencarbonate

C7016

sulfite

C8958

superoxide

C7024

thiosulfate

C7022

selenide

C7025

OH-

C7017

selenite

C7034

hydrogensulfite

C7014

sulfate

C7006

chloride

C6762

phosphonate

C6097

phosphate

C6093

diphosphate

C6094

triphosphate

C7864

Fe3+

C11001

Mo2+

C11005

Zn2+

C11011

Cu2+

C11023

Fe2+

C4320

H+

C4318

K+

C4328

ammonium

C10986

L-ascorbate

C4200

pyridoxal

C4210

pyridoxal 5'-phosphate

C4214

pyridoxine 5'-phosphate

C4188

pyridoxamine 5'-phosphate

C4216

pyridoxamine

C4208

pyridoxine

C4184

4-pyridoxate

C11281

2-chloroacetate

C10301

agmatine

C3574

spermidine

C3548

putrescine

C3576

cadaverine

C3592

N-acetylputrescine

C3544

4-aminobutanal

C6526

(2Z)-2-aminobut-2-enoate

C6524

2-aminoprop-2-enoate

C6708

2-iminopropanoate

C8959

monodehydroascorbate radical

C8965

hydroxyl radical

C4658

2,4-dinitrophenyl-S-glutathione

C13114

1-chloro-2,4-dinitrobenzene

C13354

preQ0

C13422

hydrogen cyanide

C6277

2-methoxy-6-(all-trans-octaprenyl)phenol

C6287

2-octaprenylphenol

C6290

(S)-3-hydroxy-isobutanoate

C6293

3-(all-trans-octaprenyl)benzene-1,2-diol

C6741

(S)-methylmalonate-semialdehyde

C6763

(R)-methylmalonate-semialdehyde

C6755

(R)-citramalate

C6644

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

C2017

α-D-glucosamine 6-phosphate

C2150

(2R)-2,3-dihydroxy-3-methylbutanoate

C6437

3-phospho-D-glyceroyl-phosphate

C6425

2-phospho-D-glycerate

C6438

3-phospho-D-glycerate

C8419

sn-glycerol 3-phosphate

C6599

2-iminobutanoate

C6596

2-iminosuccinate

C7121

oxygen

C7118

hydrogen sulfide

C7666

protoporphyrinogen IX

C7676

protoporphyrin IX

C7672

coproporphyrinogen I

C7662

uroporphyrinogen-I

C7658

uroporphyrinogen-III

C6624

protoheme

C9828

cob(II)yrinate a,c-diamide

C9811

cob(II)yrinate c-monoamide

C9807

adenosylcobinamide

C9869

cob(I)inamide

C9853

adenosyl-cob(III)yrinate a,c-diamide

C9823

cob(I)yrinate a,c-diamide

C9800

adenosylcobyrate

C3940

carboxyphosphinopyruvate

C3865

phosphonoacetaldehyde

C3869

1-carboxyvinyl carboxyphosphonate

C12116

(2-aminoethyl)phosphonate

C4751

3-(hydroxyphosphinoyl)pyruvate

C10799

DNA with lesion

C4632

(glutathion-S-yl)-4-hydroxy-2-nonenal