an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(3E)-2-oxopent-3-enoate

1-piperideine-2-carboxylate

(2E)-2-hydroxypenta-2,4-dienoate

enol-phenylpyruvate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

1,2-dihydro-β-NADP

picolinate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

5-aminopentanoate

4-oxoglutaramate

mercuriphenyl acetate

selenodiglutathione

glutathioselenol

hydrogen selenide

autoinducer 2

(R)-1-amino-2-propanol O-2-phosphate

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

protoanemonin

2-keto-L-gulonate

dialurate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

pyruvic oxime

(4S)-4-hydroxy-2-oxoheptanedioate

(2Z)-2-(acetamidomethylene)succinate

3-hydroxy-2-methylpyridine-5-carboxylate

3-hydroxy-2-methylpyridine-4,5-dicarboxylate

5-formyl-3-hydroxy-2-methylpyridine-4-carboxylate

(4S,5S)-4,5-dihydroxy-2,6-dioxohexanoate

3-hydroxy-4-methylbenzaldehyde

5-(hydroxymethyl)-2-methylphenol

12α-hydroxy-3-oxochol-4-en-24-oyl-CoA

12α-hydroxy-3-oxochol-4,6-dien-24-oyl-CoA

7α,12α-dihydroxy-3-oxochol-4-en-24-oyl-CoA

3-oxocholoyl-CoA

allopregnanolone

deoxycholoyl-CoA

12α-hydroxy-3-oxocholan-24-oyl-CoA

N-Formyl-L-kynurenine

4-methyl-3-oxoadipate-enol-lactone

hexulose 6-phosphate

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

4-methyl-3-oxoadipate

isochorismate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

3-maleylpyruvate

4-methylgentisate

(2E)-3-methyl-4,6-dioxohept-2-enedioate

3-methylgentisate

(2E)-2-methyl-4,6-dioxohept-2-enedioate

2-aminoacetaldehyde

2-aminomalonate semialdehyde

4-pyridoxolactone

trans-O-hydroxybenzylidenepyruvate

salicyl alcohol

methylsalicylate

2-hydroxy-5-carboxymethylmuconate semialdehyde

8-amino-7-oxononanoate

(S)-4-amino-5-oxopentanoate

L-tartrate

meso-tartrate

2-hydroxy-3-oxosuccinate

β-D-glucosyl-(1,4)-α-D-glucosyl-diphosphoundecaprenol

α-D-Man-(1→3)-β-D-Glc-(1→4)-α-D-Glc-1-diphospho-ditrans,octacis-undecaprenol

L-gulono-1,4-lactone

2-aryl-2-methylmalonate

2-arylpropanoate

5-dehydro-2-deoxy-D-gluconate

5-dehydro-2-deoxy-D-gluconate 6-phosphate

2-amino-3-carboxymuconate-6-semialdehyde

(2Z,4E)-2-amino-6-oxohexa-2,4-dienoate

N-succinyl-L,L-2,6-diaminopimelate

(S)-2,3,4,5-tetrahydrodipicolinate

N-succinyl-2-amino-6-ketopimelate

ammonia

hydroxylamine

lipid IV_A

5-enolpyruvoyl-shikimate 3-phosphate

2-keto-D-gluconate

2,5-didehydro-D-gluconate

2-dehydro-3-deoxy-L-rhamnonate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

1-deoxy-L-glycero-tetrulose 4-phosphate

5-amino-6-(D-ribitylamino)uracil

propanoyl phosphate

2-dehydropantoate

(S)-5-amino-3-oxohexanoate

5-methylsalicylate

4-methylsalicylate

lipid X

lipid A disaccharide (E. coli)

3-deoxy-D-manno-octulosonate 8-phosphate

α-ribazole

5,6-dimethylbenzimidazole

α-ribazole 5'-phosphate

2-phosphoglycolate

glutathione disulfide

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

(4-hydroxyphenyl)acetate

DNA without lesion

(lipoyl)adenylate

S-formylglutathione

5-carboxymethyl-2-hydroxymuconate

3-amino-1-hydroxyacetone 1-phosphate

butyramide

pyrazine-2-carboxylate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

biuret

urea-1-carboxylate

(2-hydroxyphenyl)acetate

2-dehydro-3-deoxy-D-galactonate 6-phosphate

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-D-muramate 6-phosphate

H₂

carboxyphosphate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

2-dehydro-3-deoxy-D-gluconate

(S)-5-hydroxyisourate

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

6-amino-2-oxohexanoate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

5-methylcytosine

tartronate semialdehyde

2-dehydro-3-deoxy-D-galactonate

N⁵-carboxyaminoimidazole ribonucleotide

β-D-ribosylnicotinate

7-carboxy-7-deazaguanine

creatinine

3-hydroxypropanoate

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

pimelate

pimeloyl-CoA

O-acetyl-L-serine

4-fumaryl-acetoacetate

5-dehydro-4-deoxy-D-glucarate

2,5-dioxopentanoate

(S)-mandelate

(R)-mandelate

3-deoxy-D-arabino-heptulosonate 7-phosphate

porphobilinogen

preuroporphyrinogen

histidinal

histidinol

citraconate

(2R,3S)-3-methylmalate

isoquinoline

isoquinolin-2(1H)-one

prenyl diphosphate

isopentenyl diphosphate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

cis,cis-muconate

(S)-4-hydroxy-2-oxopentanoate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

L-β-lysine

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

carbon monoxide

hydrogenobyrinate a,c-diamide

3-hydroxyanthranilate

31-O-desmethylFK-506

FK-506

(2S)-2-isopropyl-3-oxosuccinate

4-methyl-2-oxopentanoate

3-ethylmalate

2-oxovalerate

carbonic acid

coproporphyrinogen III

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(4Z)-2-oxohept-4-enedioate

N-(5-phosphoribosyl)-anthranilate

D-erythro-imidazole-glycerol-phosphate

3-ureidopropanoate

ethanolamine

5-oxo-L-proline

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

3-deoxy-α-D-manno-2-octulosonate

α-D-ribose-1-methylphosphonate 5-phosphate

5-phospho-α-D-ribose 1,2-cyclic phosphate

hydrogen peroxide

acetoacetate

2-pyrone-4,6-dicarboxylate

(2Z,4E)-2-hydroxy-6-oxohexa-2,4-dienoate

2-oxopent-4-enoate

2-maleylacetate

chlorite

2-methyl-1,4-benzoquinone

methyl-1,4-benzoquinol

orotidine 5'-phosphate

4-hydroxy-2-nonenal

glycolate

4-imidazolone-5-propanoate

urocanate

aminoacetone

glycerone phosphate

5-dehydro-D-gluconate

hydroxypyruvate

6-phospho D-glucono-1,5-lactone

acetyl phosphate

3-deoxy-D-glycero-2,5-hexodiulosonate

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

(E)-3-(methoxycarbonyl)pent-2-enedioate

5-phospho-β-D-ribosylamine

N-acetyl-L-glutamate 5-semialdehyde

N-acetylglutamyl-phosphate

(S)-dihydroorotate

carbamoyl phosphate

3-dehydroquinate

3-dehydroshikimate

3-mercaptopyruvate

oxalosuccinate

L-selenocystathionine

phosphoenolpyruvate

2-(α-hydroxyethyl)thiamine diphosphate

thiamine diphosphate

2-C-methyl-D-erythritol 4-phosphate

nicotinate adenine dinucleotide

D-gluconate 6-phosphate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

phenylglyoxylate

2-(4-hydroxyphenyl)-2-oxoacetate

4-hydroxybenzaldehyde

homogentisate

4-maleyl-acetoacetate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-3-methyl-2-oxopentanoate

3-methyl-2-oxobutanoate

β-nicotinate D-ribonucleotide

quinolinate

anthranilate

(S)-ureidoglycolate

urea

3-phosphooxypyruvate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-phosphooxy-L-threonine

α-D-glucosamine 1-phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

thiamine phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

4-amino-4-deoxychorismate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

propionamide

(indol-3-yl)acetamide

acrylamide

acrylate

4-guanidinobutyramide

4-guanidinobutanoate

3-oxopropanoate

4-aminobutanoate

succinate semialdehyde

L-canavanine

shikimate

shikimate 3-phosphate

5-aminolevulinate

L-arginino-succinate

O-ureido-L-homoserine

canavaninosuccinate

citrate

(2S)-2-isopropylmalate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

imidazole acetol-phosphate

L-histidinol phosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

oxaloacetate

(indol-3-yl)pyruvate

(indol-3 yl)acetyl-CoA

hydrogenobyrinate

γ-L-glutamyl 5-phosphate

(R)-pantothenate

prephenate

xanthine

S-ribosyl-L-homocysteine

4'-phosphopantetheine

CO₂

(R)-4'-phosphopantothenate

(R)-4'-phosphopantothenoyl-L-cysteine

2,3-didehydroadipyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

(E)-4-coumaroyl-CoA

H₂O

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

hippurate

L-homocysteine

phenylacetate

ethylphosphate

hydrogen cyanide

adenosylcobalamin

cob(I)alamin

hemin

adenosylcobyrate

adenosyl-cobinamide phosphate

adenosylcobinamide-GDP

adenosylcobalamin 5'-phosphate

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)inamide

adenosylcobinamide

cobalt-precorrin-6B

cobalt-precorrin-5B

cobalt-precorrin-6A

cob(II)yrinate c-monoamide

cob(II)yrinate a,c-diamide

cobyrinate

protoheme

protoporphyrinogen IX

uroporphyrinogen-III

uroporphyrinogen-I

coproporphyrinogen I

protoporphyrin IX

siroheme

hydrogen sulfide

Hg⁰

oxygen

2-iminosuccinate

2-iminopropanoate

2-iminobutanoate

2-chloroacetate

sn-glycerol 1-phosphate

sn-glycerol 3-phosphate

(R)-glycerate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

N-acetyl-D-mannosamine 6-phosphate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

N-acetyl-β-neuraminate 9-phosphate

(S)-ureidoglycine

(R)-citramalate

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

(S)-4-hydroxymandelate

(R)-4-hydroxymandelate

3-(all-trans-octaprenyl)benzene-1,2-diol

(S)-3-hydroxy-isobutanoate

2-octaprenylphenol

2-methoxy-6-(all-trans-octaprenyl)phenol

3-cyanopyridine

(indole-3-yl)acetonitrile

propionitrile

acrylonitrile

preQ₀

n-butyronitrile

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

N-acetyl-β-neuraminate

5'-deoxy-5'-fluoroadenosine

5-fluoro-5-deoxy-D-ribose 1-phosphate

3-chloro-cis,cis-muconate

5-chloro-5-deoxy-D-ribonate

5-chloro-4-hydroxy-2-oxopentanoate

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

4-chlorosalicylate

5-chlorosalicylate

4-chlorocatechol

Fe³⁺

ammonium

K⁺

H⁺

Zn²⁺

Ni²⁺

Mo²⁺

Co²⁺

Fe²⁺

Hg²⁺

nitrate

sulfate

hydrogensulfite

selenite

molybdate

OH^-

nitrite

sulfite

superoxide

selenate

hydrogencarbonate

phosphonate

phosphate

triphosphate

diphosphate

chloride

hydroxyl radical

(2E,6E)-farnesyl diphosphate

pristanate

sn-glycero-3-phosphoethanolamine

glycerophosphoglycerol

glycerophosphoserine

ferrichrome

glycine betaine

betaine aldehyde

choline

choline sulfate

betaine aldehyde hydrate

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

agmatine

spermidine

cadaverine

putrescine

S-(hydroxymethyl)glutathione

γ-L-glutamyl-[(S)-allyl]-L-cysteine

S-allyl-L-cysteine

γ-L-glutamyl-(S)-methyl-L-cysteine

γ-L-glutamyl-(S)-trans-1-propenyl-L-cysteine

S-trans-1-propenyl-L-cysteine

glutathione

methanethiol

thiocyanate

5-(2-hydroxyethyl)-4-methylthiazole

4-methyl-5-(2-phosphooxyethyl)thiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

taurine

L-cysteate

3-sulfopyruvate

(R)-S-lactoylglutathione

all-trans-retinyl palmitate

D-galactono-1,4-lactone

cis-dienelactone

trans-dienelactone

D-glucono-1,5-lactone

2-methylbutanoyl-CoA

acryloyl-CoA

choloyl-CoA

(+)-7-epi-jasmonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

6-trans-3-oxo-tridecenoyl-CoA

4-trans-undecenoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3E)-dec-3-enoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

4-cis-undecenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

2-trans-nonenoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

(2S)-ethylmalonyl-CoA

(2R)-ethylmalonyl-CoA

(S)-3-aminobutanoyl-CoA

isobutanoyl-CoA

3-hydroxypropanoyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

salicyl-CoA

gentisyl-CoA

4-hydroxybenzoyl-CoA

3'-dephospho-CoA

trans-feruloyl-CoA

anthraniloyl-CoA

isovaleryl-CoA

3-methylcrotonyl-CoA

3-methylglutaconyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

succinyl-CoA

2-methylacetoacetyl-CoA

acetyl-CoA

malonyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

(3S)-hydroxyadipyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-hydroxyisovaleryl-CoA

(E)-2-methylcrotonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

methylacrylyl-CoA

(S)-methylmalonyl-CoA

(R)-methylmalonyl-CoA

crotonyl-CoA

phytenoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

(3Z)-dodec-3-enoyl-CoA

oleoyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

7-hydroxylauroyl-CoA

18-hydroxystearoyl-CoA

16-hydroxypalmitoyl-CoA

18-hydroxyoleoyl-CoA

(3R,7Z,10Z,13Z,16Z)-3-hydroxydocosatetraenoyl-CoA

(3R,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosapentaenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxypentanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(3R,9Z,12Z,15Z,18Z)-3-hydroxytetracosatetraenoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z)-3-hydroxytetracosapentaenoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(9Z,12Z,15Z,18Z)-3-oxotetracosatetraenoyl-CoA

(9Z,12Z,15Z,18Z,21Z)-3-oxotetracosapentaenoyl-CoA

(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(Z)-15-tetracosenoyl-CoA

butanoyl-CoA

propanoyl-CoA

hexanoyl-CoA

octanoyl-CoA

lauroyl-CoA

decanoyl-CoA

myristoyl-CoA

stearoyl-CoA

palmitoyl-CoA

pristanoyl-CoA

(7Z,10Z,13Z,16Z)-3-oxodocosatetraenoyl-CoA

(4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA

hexadecanedioyl-CoA

3-oxoadipyl-CoA

4-methyl-3-oxoadipyl-CoA

3-oxododecanoyl-CoA

3-oxooctanoyl-CoA

3-oxodecanoyl-CoA

3-oxohexanoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

(6Z,9Z,12Z,15Z,18Z,21Z)-3-oxotetracosahexaenoyl-CoA

(6Z,9Z,12Z,15Z,18Z)-3-oxotetracosapentaenoyl-CoA

3-oxooctadecanoyl-CoA

3-oxo-palmitoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-myristoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

ethene

methane

5-α-pregnane-3,20-dione

3-oxo-4-pregnene-20-carboxyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

(25S)-3-oxocholest-4-en-26-oyl-CoA

deoxycholate

cholate

3-dehydrocholate

5β-cholestane-3α,7α,12α-triol

5β-cholestane-3α,7α-diol

androsterone

5-α-androstan-3α,17β-diol

17-β-hydroxy-5-α-androstan-3-one

campest-4-en-3β-ol

7α,12α-dihydroxy-5β-cholestan-3-one

7α-hydroxy-5β-cholestan-3-one

androst-4-ene-3,17-dione

campest-4-en-3-one

5α-androstane-3,17-dione

testosterone

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

riboflavin

nicotinamide

thiamine

nicotinate

all-trans-retinol

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

7,8-dihydrofolate monoglutamate

tetrahydromethanopterin

5,10-methylene-tetrahydromethanopterin

4-pyridoxate

pyridoxine

pyridoxal

pyridoxine 5'-phosphate

pyridoxal 5'-phosphate

pyridoxamine

pyridoxamine 5'-phosphate

menadione

FMNH₂

FMN

FAD

FADH₂

(R)-NADHX

(S)-NADHX

NADH

NADPH

NAD⁺

NADP⁺

caldariellaquinone

caldariellaquinol

ubiquinol-8

menaquinol-8

demethylmenaquinol-8

3-demethylubiquinol-8

adenosine 2',3'-cyclic monophosphate

guanosine 2',3'-cyclic monophosphate

isoguanine

8-oxo-dGTP

8-oxo-GTP

pppGpp

ppGpp

cyclic-AMP

5'-deoxyadenosine

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

dATP

IDP

ITP

dIDP

dITP

dGTP

dADP

dGDP

guanosine 3'-monophosphate

adenosine 3'-monophosphate

adenylo-succinate

GDP

IMP

ADP

GTP

2'-deoxyinosine

2'-deoxyguanosine

hypoxanthine

2'-deoxyadenosine

ATP

XMP

GMP

AMP

5-fluorocytosine

5-fluorouracil

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

guanosine

adenosine

inosine

xanthosine

cytidine

uridine

2'-deoxycytidine

2'-deoxyuridine

thymidine

uridine 2'3'-cyclic monophosphate

cytidine 2',3'-cyclic monophosphate

cyclic di-3',5'-guanylate

2-hydroxy-dATP

5-hydroxy-CTP

5-hydroxy-CMP

dTTP

dCTP

dUTP

UTP

CTP

dCMP

dUMP

dTMP

UMP

CMP

dUDP

dCDP

dTDP

CDP

UDP

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

cytidine-3'-monophosphate

uridine 3'-monophosphate

GDP-α-D-glucose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-mannose

GDP-β-L-fucose

ADP-α-D-glucose

N¹-ethyladenine

N3-methylcytosine

N¹-methyladenine

preQ₁

cytosine

uracil

thymine

guanine

adenine

5,6-dihydrouracil

5,6-dihydrothymine

CMP-3-deoxy-β-D-manno-octulosonate

UDP-α-D-glucose

CDP-α-D-glucose

dTDP-α-D-glucose

UDP-α-D-galactofuranose

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-α-D-galactose

UDP-α-D-glucuronate

UDP-β-L-iduronate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

CDP-4-dehydro-6-deoxy-α-D-glucose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

molybdopterin

(R)-lipoate

coenzyme A

MoO₂-molybdopterin cofactor

thio-molybdenum cofactor

(6R)-L-erythro-5,6,7,8-tetrahydrobiopterin

(S)-1-pyrroline-5-carboxylate

precorrin-6A

precorrin-1

precorrin-6B

precorrin-7

precorrin-5

precorrin-8x

precorrin-2

precorrin-3A

precorrin-3B

precorrin-4

sirohydrochlorin

hydantoin

7,8-dihydrolumazine

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

molybdopterin adenine dinucleotide

cyclic pyranopterin phosphate

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

7,8-dihydropterin

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydropteroate

6-carboxy-5,6,7,8-tetrahydropterin

(6R)-4a-hydroxy-tetrahydrobiopterin

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

orotate

2-hydroxychromene-2-carboxylate

toluene

benzene

urate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

3-hexaprenyl-4-hydroxybenzoate

cyanuric acid

4-hydroxybenzoate

benzaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

2,5-xylenol

3-hydroxy-5-methylbenzaldehyde

3-(hydroxymethyl)-5-methylphenol

3,5-xylenol

phenol

2,3-dihydroxybenzoate

4-methylcatechol

3,4-dihydroxyphenylacetate

protocatechuate

catechol

menadiol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

all trans-decaprenyl-2-methoxy-6-1,4-benzoquinol

ferulate

salicylate

3-hydroxy-4-methyl-benzoate

3-hydroxy-5-methyl-benzoate

4-aminobenzoate

benzoate

diacetyl

methylglyoxal

1-octanal

formaldehyde

acetaldehyde

(S)-lactaldehyde

D-glyceraldehyde

α-D-ribofuranose

α-L-arabinopyranose

α-D-xylopyranose

α-L-rhamnopyranose

β-L-rhamnopyranose

α-D-glucopyranose

β-D-glucopyranose

β-D-galactopyranose

α-D-galactopyranose

methanol

ethanol

1-octanol

glycerol

D-ribitol

D-mannitol

1D-chiro-inositol

scyllo-inositol

myo-inositol

1-keto-D-chiro-inositol

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

scyllo-inosose

D-ononitol

D-galactosylononitol

1D-myo-inositol 4-monophosphate

1D-myo-inositol 2-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 3-monophosphate

galactinol

1-(β-D ribofuranosyl)nicotinamide

5-dehydro-4-deoxy-D-glucuronate

α-Kdo-(2→6)-lipid IV_A

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

unsaturated gellan tetrasaccharide

maltotriose

isoprimeverose

raffinose

β-D-Glcp-(1→4)-α-L-Rhap-(1→3)-D-Glcp

stachyose

maltotetraose

maltopentaose

maltoheptaose

maltohexaose

4-deoxy-β-L-erythro-hex-4-enopyranuronosyl-(1,4)-D-N-sulfoglucosamine 6-O-sulfate

sucrose

4-deoxy-β-D-gluc-4-enuronosyl-(1,3)-N-acetyl-D-galactosamine

4-deoxy-2-O-sulfo-β-L-erythro-hex-4-enopyranuronosyl-(1,4)-D-N-sulfoglucosamine 6-O-sulfate

α,α-trehalose

keto-D-fructose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-mannosamine

N-acetyl-β-D-glucosamine

D-xylulose

D-ribulose

L-ribulose

β-D-fructofuranose

4-deoxy-L-erythro-hex-4-enopyranuronate

4-deoxy-L-threo-hex-4-enopyranuronate

1-O-acetyl-α-maltose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faecium, tetrapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

α,α-trehalose 6-phosphate

α-D-glucopyranose 1-phosphate

D-glyceraldehyde 3-phosphate

4-phospho-D-erythronate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

5-phospho-α-D-ribose 1-diphosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

α-D-glucose 6-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

D-arabinofuranose 5-phosphate

L-ribulose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

L-idonate

L-gulonate

D-mannonate

D-galactonate

D-gluconate

18-hydroxystearate

16-hydroxypalmitate

18-hydroxyoleate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

1-oleoyl-sn-glycerol 3-phosphate

geranyl diphosphate

trans,octacis-decaprenyl phosphate

di-trans,octa-cis-undecaprenyl phosphate

all-trans-hexaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-heptaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

3-decaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

iron(III) dicitrate

6-aminopenicillanate

isopenicillin N

penicillin G

3-benzyl-3,6 -bis(cysteinylglycine)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

allantoate

acetamide

(S)-(+)-allantoin

pyrazinamide

5-amino-4-imidazolecarboxyamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

(3E)-2-oxohex-3-enedioate

chorismate

fumarate

succinate

L-aspartate

(S)-malate

D-galactarate

α,ω-9Z-octadecenedioate

3-(carbamoylamino)-2-methylpropanoate

2-hydroxy-4-oxobutane-1,2,4-tricarboxylate

3-carboxy-cis,cis-muconate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

(1E,3E)-4-hydroxybuta-1,3-diene-1,2,4-tricarboxylate

(1E)-4-oxobut-1-ene-1,2,4-tricarboxylate

trans-aconitate

cis-aconitate

D-threo-isocitrate

3-oxoadipate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

pyruvate

4-(methylsulfanyl)-2-oxobutanoate

2-oxoglutarate

glyoxylate

2-oxobutanoate

(R)-4-hydroxy-4-methyl-2-oxoglutarate

acetate

formate

propanoate

(R)-lactate

(S)-lactate

octanoate

7-hydroxylaurate

laurate

decanoate

gentisate

(R)-3-hydroxybutanoate

(15Z)-tetracosenoate

(9Z,15Z)-12,13-epoxy-octadeca-9,15-dienoate

(12Z,15Z)-9,10-epoxyoctadeca-12,15-dienoate

(9Z,12Z)-15,16-epoxyoctadeca-9,12-dienoate

8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate

dinor-12-oxo-phytodienoate

α-linolenate

linoleate

stearate

palmitate

oleate

(9Z,15Z)-12,13-dihydroxyoctadeca-9,15-dienoate

(12Z,15Z)-9,10-dihydroxyoctadeca-12,15-dienoate

(9Z,12Z)-15,16-dihydroxyoctadeca-9,12-dienoate

phytenate

5-deoxy-D-glucuronate

(R)-pantoate

L-α-amino-ε-keto-pimelate

L-2-aminoadipate

carbamate

L-kynurenine

L-serine

L-cysteine

L-asparagine

L-tyrosine

glycine

L-glutamine

L-threonine

L-histidine

L-lysine

L-arginine

L-glutamate

L-methionine

L-valine

L-leucine

L-isoleucine

L-phenylalanine

L-alanine

L-tryptophan

L-proline

creatine

(R)-β-lysine

β-alanine

(R)-3-amino-2-methylpropanoate

(S)-3-amino-2-methylpropanoate

D-glutamate

D-proline

D-aspartate

D-lysine

D-alanine

L-isoglutamine

L,L-diaminopimelate

L-aspartyl-4-phosphate

L-cystathionine

L-ornithine

N-carbamoyl-L-aspartate

formyl-L-isoglutamine

N-formyl-L-glutamate

N-formimino-L-glutamate

N-acetyl-L-citrulline

N-acetyl-L-ornithine

L-2-amino-3-oxobutanoate

seleno-L-homocysteine

3-phospho-L-serine

S-methyl-L-cysteine

sarcosine

N-carbamoylglycine

N-acetyl-L-methionine

N-acetyl-L-glutamate

trans-4-hydroxy-L-proline

3-hydroxy-L-kynurenine

L-proline betaine

D-proline betaine

N-methyl-L-proline

O-acetyl-L-homoserine

L-citrulline

hypoglycin A

L-canaline

L-homoserine

O-succinyl-L-homoserine

L-aspartate 4-semialdehyde

O-phospho-L-homoserine

S-adenosyl-L-methionine

L-glutamate-5-semialdehyde

S-adenosyl-L-homocysteine

meso-diaminopimelate

L-allo-threonine

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

hypoglycin B

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-cysteinylglycine

D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine