an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

H₂O

2-phenylethanol

2-methylbutanal

2-methylbutanol

3-methylbutanal

3-methylbutanol

isobutanol

indole-3-glycol aldehyde

indole-3-glycol

3-methoxy-4-hydroxyphenylglycolaldehyde

5-hydroxyindole acetaldehyde

5-hydroxytryptophol

CO₂

coproporphyrinogen III

D-gluconate 6-phosphate

6-phospho D-glucono-1,5-lactone

succinate semialdehyde

(4S)-4-hydroxy-2-oxoheptanedioate

3-deoxy-α-D-manno-2-octulosonate

glycerone phosphate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

lipid IV_A

pseudouridine 5'-phosphate

hydrogen peroxide

3-amino-1-hydroxyacetone 1-phosphate

prenyl diphosphate

phosphoenolpyruvate

4-amino-4-deoxychorismate

thiamine phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

S-acetyldihydrolipoamide

dihydrolipoamide

thiamine diphosphate

2-(α-hydroxyethyl)thiamine diphosphate

itaconate

lipid A disaccharide (E. coli)

lipid X

acetoacetate

4-fumaryl-acetoacetate

2-C-methyl-D-erythritol 4-phosphate

2,3-didehydroadipyl-CoA

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

(E)-2-benzylidenesuccinyl-CoA

carbon monoxide

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

oxaloacetate

3-methyl-2-oxobutanoate

5-enolpyruvoyl-shikimate 3-phosphate

L-canavanine

canavaninosuccinate

L-arginino-succinate

core oligosaccharide-lipid A (E. coli K-12 core type)

M_LPS

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

(2S)-2-isopropylmalate

(2R,3S)-3-methylmalate

citraconate

O-acetyl-L-serine

hydrogen selenide

3-dehydroquinate

3-deoxy-D-arabino-heptulosonate 7-phosphate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

glycolate

N-acetylglutamyl-phosphate

8-amino-7-oxononanoate

pimeloyl-CoA

7,8-diaminopelargonate

(S)-2-amino-6-oxohexanoate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

dethiobiotin

N-(5-phosphoribosyl)-anthranilate

2-oxovalerate

3-ethylmalate

4-methyl-2-oxopentanoate

(2S)-2-isopropyl-3-oxosuccinate

N-acetyl-L-glutamate 5-semialdehyde

DNA without lesion

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

3-oxo-3-phenylpropanoyl-CoA

3α,7α-dihydroxy-24-oxo-5β-cholestanoyl CoA

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

5-amino-6-(D-ribitylamino)uracil

1-deoxy-L-glycero-tetrulose 4-phosphate

5-phospho-β-D-ribosylamine

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

benzoylsuccinyl-CoA

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

isopentenyl diphosphate

carbonic acid

7-carboxy-7-deazaguanine

oxalosuccinate

L-histidinol phosphate

imidazole acetol-phosphate

3-deoxy-D-manno-octulosonate 8-phosphate

3-(O-geranylgeranyl)-sn-glycerol 1-phosphate

4-prenylphlorisobutyrophenone

ADP-L-glycero-β-D-manno-heptose

ADP-D-glycero-β-D-manno-heptose

2-dehydropantoate

propionamide

(indol-3-yl)acetamide

4-guanidinobutanoate

4-guanidinobutyramide

acrylate

acrylamide

hydrogenobyrinate

hydrogenobyrinate a,c-diamide

(R)-1-aminopropan-2-ol

shikimate 3-phosphate

shikimate

3-phosphooxypyruvate

4'-phosphopantetheine

(R)-4'-phosphopantothenoyl-L-cysteine

3-keto-β-D-galactose

3-dehydroshikimate

4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate

(S)-3-methyl-2-oxopentanoate

(R)-2,3-dihydroxy-3-methylpentanoate

glutathione disulfide

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

N¹-(5-phospho-β-D-ribosyl)glycinamide

(R)-4'-phosphopantothenate

(R)-pantothenate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

4-phosphooxy-L-threonine

citrate

β-L-arabinose 1-phosphate

carbamoyl phosphate

cis-coumarinic acid-β-D-glucoside

scopolin

4-hydroxybenzaldehyde

4-methylumbelliferyl glucoside

5-(methylsulfanyl)-ribulose 1-phosphate

S-methyl-5-thio-α-D-ribose 1-phosphate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

quinolinate

β-nicotinate D-ribonucleotide

α-ribazole 5'-phosphate

5,6-dimethylbenzimidazole

α-ribazole

3-α(S)-strictosidine

tryptamine

secologanin

3'-phosphoadenylyl-sulfate

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

5-aminolevulinate

(S)-4-amino-5-oxopentanoate

porphobilinogen

preuroporphyrinogen

4-hydroxy-2-nonenal

arsenite

anthranilate

O-ureido-L-homoserine

orotidine 5'-phosphate

S-methyl-5'-thioadenosine

S-adenosyl 3-(methylsulfanyl)propylamine

L-β-lysine

5-deoxy-α-ribose 1-phosphate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

nicotinate adenine dinucleotide

histidinal

D-erythro-imidazole-glycerol-phosphate

prephenate

propanoyl phosphate

H₂

4-aminobutanoate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

2-maleylacetate

ethanolamine

(S)-dihydroorotate

γ-L-glutamyl 5-phosphate

5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate

1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one

4-acetamidobutanoate

4-acetamidobutanal

N²-succinylglutamate

N²-succinyl-L-glutamate 5-semialdehyde

2,5-didehydro-D-gluconate

2-keto-L-gulonate

methyl-1,4-benzoquinol

2-methyl-1,4-benzoquinone

(lipoyl)adenylate

acetyl phosphate

hydroxypyruvate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

α-D-glucosamine 1-phosphate

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

histidinol

2-hydroxy-5-(methylsulfanyl)-3-oxopent-1-enyl 1-phosphate

2-amino-3-carboxymuconate-6-semialdehyde

4-amino-2-methyl-5-pyrimidinemethanol

N-acetyl-D-muramate 6-phosphate

1,6-anhydro-N-acetyl-β-muramate

2-iminoacetate

(3S,5S)-3,5-diaminohexanoate

(S)-5-amino-3-oxohexanoate

glutathioselenol

selenodiglutathione

(R)-1-amino-2-propanol O-2-phosphate

dialurate

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

7-epicholate

1,4-dihydroxy-2-naphthoate

crotonate

cyclohex-1,5-diene-1-carbonyl-CoA

6-hydroxycyclohex-1-ene-1-carbonyl-CoA

6-oxocyclohex-1-ene-1-carbonyl-CoA

3-hydroxypimeloyl-CoA

3-oxopimeloyl-CoA

cyclohexane-1-carboxylate

cyclohexane-1-carbonyl-CoA

2-hydroxy-6-oxocyclohexane-1-carbonyl-CoA

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

autoinducer 2

S-ribosyl-L-homocysteine

5-oxo-L-proline

pseudouridine

(4-hydroxyphenyl)acetate

2-oxoglutaramate

urea

1-piperideine 6-carboxylate

ammonia

5-hydroxyindole thiazolidine carboxylate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2E,6E)-farnesyl diphosphate

pristanate

3-(methylsulfanyl)propanoate

L-aspartyl-4-phosphate

S-sulfanyl-L-cysteine

2-hydroxy-5-oxoproline

O-acetyl-L-homoserine

N-carbamoyl-L-aspartate

N-acetyl-L-ornithine

N-acetyl-L-glutamate

3-phospho-L-serine

D-alanine

D-glutamate

L-phenylalanine

L-tryptophan

L-histidine

L-tyrosine

L-cysteine

L-glutamine

glycine

L-serine

L-threonine

L-aspartate

L-glutamate

L-arginine

L-lysine

L-proline

L-alanine

L-leucine

(R)-β-lysine

β-alanine

L-valine

L-selenocysteine

L-isoleucine

L-methionine

L-cystathionine

L-ornithine

L,L-diaminopimelate

L-citrulline

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

L-homoserine

L-homocysteine

S-sulfo-L-cysteine

hypoglycin A

O-phospho-L-homoserine

1-aminocyclopropane-1-carboxylate

L-aspartate 4-semialdehyde

L-cystine

L-canaline

L-glutamate-5-semialdehyde

O-succinyl-L-homoserine

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

pyruvate

2-oxoglutarate

2-oxobutanoate

5-chloro-4-hydroxy-2-oxopentanoate

4-(methylsulfanyl)-2-oxobutanoate

glyoxylate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

protocatechuate

salicylate

4-aminobenzoate

benzoate

acetate

(R)-pantoate

5-chloro-5-deoxy-D-ribonate

orotate

D-gluconate

(S)-1-pyrroline-5-carboxylate

palmitate

octanoate

decanoate

butanoate

stearate

13-[O(2')-β-D-glucopyranosyl-β-D-glucopyranosyloxy]docosanoate O(6'')-acetate

13-sophorosyloxydocosanoate 6',6''-diacetate

sophorosyloxydocosanoate

linoleate

oleate

γ-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

α-linolenate

(3E,5Z)-tetradecadienoate

di-homo-γ-linolenate

phytenate

(15Z)-tetracosenoate

apo-4'-lycopenoate

formate

propanoate

(R)-lactate

(S)-lactate

4-hydroxybutanoate

(2R,3S)-2-methylisocitrate

(R)-glycerate

cis-aconitate

D-threo-isocitrate

chorismate

succinate

fumarate

(S)-malate

4-tyrosol

4-hydroxybenzoate

salicylaldehyde

coumarinate

4-methylumbelliferone

scopoletin

coumarin

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylglycol

phenol

4-methylphenol

menadiol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

3-demethylubiquinol-8

demethylmenaquinol-13

demethylmenaquinol-12

demethylmenaquinol-11

demethylmenaquinol-10

demethylmenaquinol-6

demethylmenaquinol-9

demethylmenaquinol-7

demethylmenaquinol-8

menaquinol-13

menaquinol-12

menaquinol-11

menaquinol-10

menaquinol-6

menaquinol-9

menaquinol-7

menaquinol-8

ubiquinol-8

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

phenylacetaldehyde

(4-hydroxyphenyl)acetaldehyde

benzaldehyde

3-methoxy-4-hydroxyphenylglycol

hydrogen cyanide

lotaustralin

linamarin

neolinustatin

linustatin

taxiphyllin

preQ₀

(2R)-2-hydroxy-2-methylbutanenitrile

2-hydroxy-2-methylpropanenitrile

adenine

guanine

GTP

ATP

ITP

AMP

GMP

XMP

IMP

GDP

ADP

IDP

dGDP

dADP

dIDP

dGTP

dATP

dITP

dGMP

dAMP

hypoxanthine

adenosine

inosine

guanosine

2'-deoxyguanosine

2'-deoxyinosine

2'-deoxyadenosine

6-carboxy-5,6,7,8-tetrahydropterin

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydroneopterin 3'-triphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydroneopterin

7,8-dihydroneopterin 3'-phosphate

7,8-dihydropteroate

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

FMN

riboflavin

FAD

FMNH₂

reduced riboflavin

FADH₂

6,7-dimethyl-8-(1-D-ribityl)lumazine

uracil

thymine

preQ₁

isoguanine

UDP

CTP

CMP-N-acetyl-β-neuraminate

dTTP

dTMP

dUMP

5,6-dihydrothymine

5,6-dihydrouracil

UTP

CDP

dCDP

dUDP

dTDP

dUTP

dCTP

dCMP

CMP

UMP

2'-deoxyuridine

2'-deoxycytidine

thymidine

uridine

cytidine

CDP-α-D-glucose

CDP-4-dehydro-6-deoxy-α-D-glucose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-4-dehydro-β-L-rhamnose

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

dTDP-β-L-rhamnose

dTDP-α-D-glucose

UDP-α-D-galactose

UDP-α-D-glucose

UDP-N-acetyl-α-D-mannosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-α-D-glucuronate

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

cob(I)alamin

adenosylcobalamin

cobyrinate

sirohydrochlorin

cobalt-precorrin-6A

cobalt-precorrin-5B

precorrin-8x

precorrin-7

precorrin-6B

precorrin-3A

precorrin-2

precorrin-5

precorrin-4

precorrin-1

cobalt-precorrin-5A

cobalt-precorrin-4

cobalt-precorrin-6B

cobalt-precorrin-8

cobalt-precorrin-7

cobalt-precorrin-3

nicotinate

nicotinamide

thiamine

menadione

pyridoxine 5'-phosphate

pyridoxal 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxamine

pyridoxine

pyridoxal

coenzyme A

(R)-lipoate

NADP⁺

NAD⁺

NADPH

NADH

(R)-NADHX

(S)-NADHX

D-glucono-1,5-lactone

trans-dienelactone

cis-dienelactone

succinyl-CoA

acetyl-CoA

itaconyl-CoA

(3R)-hydroxy-nonanoyl-CoA

2-trans-nonenoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(E)-2-methylcrotonoyl-CoA

3-hydroxyisovaleryl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

(2E,5Z)-tetradecenoyl-CoA

methylacrylyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

(+)-7-epi-jasmonoyl-CoA

4-hydroxybenzoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

benzoyl-CoA

(3E)-dec-3-enoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

4-trans-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

4-cis-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

chenodeoxycholoyl-CoA

choloyl-CoA

3α,7α,12α-trihydroxy-24-oxo-5-β-cholestanoyl CoA

2-methylacetoacetyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

malonyl-CoA

3-methylcrotonyl-CoA

isovaleryl-CoA

(3E)-undec-3-enoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

(3E)-tetradec-3-enoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

dihomo γ-linolenoyl-CoA

4-hydroxybutanoyl-CoA

3'-dephospho-CoA

3-methylglutaconyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

2-methylbutanoyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

(S)-3-aminobutanoyl-CoA

(E)-glutaconyl-CoA

glutaryl-CoA

phenylacetyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

3-oxoadipyl-CoA

3-oxo-myristoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-palmitoyl-CoA

3-oxooctanoyl-CoA

3-oxododecanoyl-CoA

3-oxodecanoyl-CoA

3-oxohexanoyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

hexadecanedioyl-CoA

stearoyl-CoA

palmitoyl-CoA

pristanoyl-CoA

octanoyl-CoA

decanoyl-CoA

hexanoyl-CoA

lauroyl-CoA

butanoyl-CoA

propanoyl-CoA

(Z)-15-tetracosenoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

(S)-malyl-CoA

phytenoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(2E)-octadec-2-enoyl-CoA

crotonyl-CoA

(R)-methylmalonyl-CoA

androsterone

pregnenolone

testosterone

progesterone

campest-4-en-3-one

ethene

(indol-3-yl)acetate

phenylacetate

(+)-7-epi-jasmonate

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

cholest-4-en-3-one

24-alkyl sterol 1

26,27-dehydrozymosterol

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

3α,7α,12β-trihydroxy-5β-cholan-24-oate

(25S)-3-oxocholest-4-en-26-oyl-CoA

3-oxocholest-4,24-dien-26-oyl-CoA

3-oxochol-4-en-24-oyl-CoA

3-oxochol-4,22-dien-24-oyl-CoA

22-hydroxy-3-oxochol-4-en-24-oyl-CoA

3-oxo-4,17-pregnadiene-20-carboxyl-CoA

17-hydroxy-3-oxo-4-pregnane-20-carboxyl-CoA

(25S)-26-hydroxycholest-4-en-3-one

(25S)-3-oxocholest-4-en-26-oate

(25S)-26-oxocholest-4-en-3-one

cholesterol

cholest-5-en-3-one

isocholate

3-dehydrocholate

glycocholate

cholate

campest-4-en-3β-ol

5α-androstane-3,17-dione

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

acetamide

2-chloroacetate

sn-glycero-3-phosphoethanolamine

sn-glycero-3-phosphocholine

glycerophosphoserine

glycerophosphoglycerol

betaine aldehyde hydrate

choline

betaine aldehyde

spermidine

putrescine

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

2-iminopropanoate

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

thiosulfate

OH^-

hydrogensulfite

hydrogencarbonate

superoxide

phosphate

diphosphate

triphosphate

chloride

Fe³⁺

Co²⁺

Fe²⁺

H⁺

ammonium

S-(hydroxymethyl)glutathione

3-(methylsulfanyl)propanal

methionol

dimethyl sulfide

glutathione

(R)-S-lactoylglutathione

3-sulfopyruvate

L-cysteate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

thiocyanate

methanethiol

S-sulfanylglutathione

N-acetyl-β-neuraminate

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

hydroxyl radical

2-methoxy-6-(all-trans-octaprenyl)phenol

2-octaprenylphenol

(S)-3-hydroxy-isobutanoate

3-(all-trans-octaprenyl)benzene-1,2-diol

5,10-methenyltetrahydrofolate mono-L-glutamate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

(R)-citramalate

1-oleoyl-2-lyso-glycerone phosphate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(2R)-2,3-dihydroxy-3-methylbutanoate

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

2-phospho-D-glycerate

3-phospho-D-glycerate

sn-glycerol 3-phosphate

sn-glycerol 1-phosphate

oxygen

hydrogen sulfide

protoporphyrinogen IX

uroporphyrinogen-III

protoporphyrin IX

coproporphyrinogen I

uroporphyrinogen-I

(Z,Z)-biliverdin-IX α

siroheme

protoheme

adenosylcobinamide

cob(I)inamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

cob(II)yrinate a,c-diamide

cob(II)yrinate c-monoamide

adenosylcobyrate

adenosylcobinamide-GDP

adenosyl-cobinamide phosphate

adenosylcobalamin 5'-phosphate

cobalt-sirohydrochlorin

cobalt-factor III

ethylphosphate

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal

N-acetyl-L-glutaminyl-L-glutamine amide

N-acetyl-L-glutaminyl-L-glutamine

L-cysteinylglycine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

2-iminosuccinate

2-iminobutanoate

hypoglycin B

5'-deoxyadenosine

1-(5-phospho-β-D-ribosyl)-ATP

adenylo-succinate

cyclic-AMP

1-(5-phospho-β-D-ribosyl)-AMP

ppGpp

pppGpp

8-oxo-dGTP

8-oxo-GTP

cyclic di-3',5'-guanylate

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

5-hydroxy-CTP

2-hydroxy-dATP

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-mannose

GDP-β-L-fucose

CMP-3-deoxy-β-D-manno-octulosonate

XXXG xyloglucan oligosaccharide

colanic acid

β-D-cellobiose

maltotriose

α-Kdo-(2→6)-lipid IV_A

allolactose

sucrose

melibiose

α-maltose

α-lactose

maltohexaose

maltoheptaose

maltopentaose

maltotetraose

stachyose

raffinose

XLLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XXLG xyloglucan oligosaccharide

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

3'-ketolactose

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

5-phospho-α-D-ribose 1-diphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

4-phospho-D-erythronate

α-D-galactose 1-phosphate

α-D-mannose 1-phosphate

α-D-glucopyranose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-ribose-1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (mycobacteria)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

glycerol

β-D-fructofuranose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-α-D-mannosamine

N-acetyl-β-D-glucosamine

D-glyceraldehyde

glycolaldehyde

β-L-arabinopyranose

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

β-D-glucopyranose

α-D-glucopyranose

β-D-galactopyranose

α-D-galactopyranose

phlorisovalerophenone

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

(3S)-linalool

(3R)-linalool

geranyl diphosphate

apo-4'-lycopenal

deoxycohumulone

4-prenylphlorisovalerophenone

deoxyhumulone

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

geranylgeranyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-heptaprenyl diphosphate

3-octaprenyl-4-hydroxybenzoate

dioleoyl phosphatidate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-oleoyl-sn-glycerol 3-phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

myo-inositol

1D-myo-inositol 2-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 3-monophosphate

phytol

propan-1-ol

ethanol

butan-1-ol

methanol

3-methyl-6-methoxy-2-octaprenyl-1,4-benzoquinone

6-methoxy-2-all-trans-octaprenyl-1,4-benzoquinone

diacetyl

methylglyoxal

phytenal

(S)-lactaldehyde

isobutanal

1-propanal

acetaldehyde

formaldehyde

1-octanal

butan-1-al

a coenzyme-A group