an oxidized electron donor
a reduced electron donor
a deaminated amino group acceptor
an aminated amino group acceptor
Charged-LEU-tRNAs
LEU-tRNAs
a 2-oxo acid
an amino acid
an acyl-CoA
a carboxylate
an oxidized ferredoxin [iron-sulfur] cluster
a reduced ferredoxin [iron-sulfur] cluster
NAD(P)H
NAD(P)+
an L-tyrosyl-[tRNAtyr]
a tRNAtyr
(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde
4α,14α-dimethyl-porifersta-8,25(27)-dienol
2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate
4-methylcyclohex-1,5-diene-1-carbonyl-CoA
isoshowacene
2-hydroxyhexadecanal
16-sinapoyloxypalmitate
3-methylquinolin-2-ol
(22R)-hydroxycholesterol
N-(2-methylpropyl)hydroxylamine
chloroeremomycin
3-hydroxy-3-methylbutanoate
2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
rhamnosyl tetracyclic spinosyn pseudoaglycone
rhamnosyl tricyclic spinosyn pseudoaglycone
spinosyn tricyclic macrolactone
11-dehydro-15-oxo spinosyn macrolactone
15-oxo spinosyn macrolactone
spinosyn macrolactone
diethylamine N-oxide
triethylamine N-oxide
UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate
nitroxyl
trans,octacis-decaprenylphospho-β-D-arabinofuranose
1,3-dihydro-2H-imidazol-2-one
2-phenylethyl β-D-glucopyranoside
formyl hopane
ribosyl hopane
adenosyl hopane
(2Z)-2-hydroxypenta-2,4-dienoate
(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate
(2Z)-2,4-dihydroxypent-2-enoate
(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA
(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA
(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA
(+)-3'-hydroxylarreatricin
(+)-larreatricin
2-trans,4-trans-xanthoxin
ammonia
4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine
autoinducer 2
(R)-4'-phosphopantothenoyl-L-cysteine
2-iminoacetate
5-amino-6-(5-phospho-D-ribosylamino)uracil
5-amino-6-(5-phospho-D-ribitylamino)uracil
2-amino-3-carboxymuconate-6-semialdehyde
N-acetyl-D-muramate 6-phosphate
(S)-5-amino-3-oxohexanoate
(3S,5S)-3,5-diaminohexanoate
acetoacetate
hydroxypyruvate
S-adenosyl 3-(methylsulfanyl)propylamine
(2S)-2-isopropyl-3-oxosuccinate
3-ethylmalate
2-oxovalerate
(R)-2,3-dihydroxy-3-methylpentanoate
(S)-2-acetolactate
(S)-2-aceto-2-hydroxybutanoate
pyrazine-2-carboxylate
creatinine
2-oleoylglycerol
3-dehydroquinate
shikimate
3-dehydroshikimate
shikimate 3-phosphate
5-enolpyruvoyl-shikimate 3-phosphate
3-deoxy-D-arabino-heptulosonate 7-phosphate
(S)-dihydroorotate
orotidine 5'-phosphate
3-phosphooxypyruvate
(S)-ureidoglycolate
urea
γ-L-glutamyl 5-phosphate
(2S)-2-isopropylmalate
(2R,3S)-3-isopropylmalate
2-isopropylmaleate
citrate
prephenate
4-amino-4-deoxychorismate
anthranilate
N-(5-phosphoribosyl)-anthranilate
isochorismate
(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate
L-β-lysine
4-imidazolone-5-propanoate
urocanate
2-dehydro-3-deoxy-D-gluconate
2-dehydro-3-deoxy-D-gluconate 6-phosphate
4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate
methylsalicylate
muconolactone
(+)-muconolactone
cis,cis-muconate
quinolinate
1-deoxy-L-glycero-tetrulose 4-phosphate
2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one
5-amino-6-(D-ribitylamino)uracil
4-methylumbelliferyl glucoside
4-hydroxybenzaldehyde
scopolin
cis-coumarinic acid-β-D-glucoside
β-nicotinate D-ribonucleotide
β-D-ribosylnicotinate
α-D-glucosamine 1-phosphate
ethanolamine
2-dehydropantoate
xanthine
butanoyl phosphate
DNA without lesion
prenyl diphosphate
H2
1,4-dihydroxy-2-naphthoate
(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran
(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran
isopentenyl diphosphate
enol-phenylpyruvate
(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one
(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one
pyruvic oxime
N-acetyl-L-glutamate 5-semialdehyde
N-acetylglutamyl-phosphate
L-canavanine
L-arginino-succinate
canavaninosuccinate
salicyl alcohol
nicotinate adenine dinucleotide
5-amino-1-(5-phospho-β-D-ribosyl)imidazole
N1-(5-phospho-β-D-ribosyl)glycinamide
5-phospho-β-D-ribosylamine
N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide
2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate
thiamine phosphate
2-O-(6-phospho-α-D-mannosyl)-D-glycerate
3-keto-β-D-galactose
hydroxylamine
6-phospho D-glucono-1,5-lactone
D-gluconate 6-phosphate
oxalosuccinate
acetyl phosphate
S-methyl-5'-thioadenosine
5-(methylsulfanyl)-α-D-ribose
S-ribosyl-L-homocysteine
carbamoyl phosphate
O-ureido-L-homoserine
5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole
glycerone phosphate
luteolin 7-O-[β-D-glucosyluronate-(1,2)-β-D-glucosiduronate]-4'-O-β-D-glucosiduronate
luteolin 7-O-β-D-diglucuronide
luteolin 7-O-β-D-glucuronide
histidinal
imidazole acetol-phosphate
D-erythro-imidazole-glycerol-phosphate
dihydroxyacetone
N2-succinyl-L-glutamate 5-semialdehyde
N2-succinylglutamate
4-acetamidobutanal
4-acetamidobutanoate
2-keto-D-gluconate
2,5-didehydro-D-gluconate
S-methyl-5-thio-α-D-ribose 1-phosphate
5-(methylsulfanyl)-ribulose 1-phosphate
hydrogenobyrinate
hydrogenobyrinate a,c-diamide
(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate
2-C-methyl-D-erythritol-2,4-cyclodiphosphate
2-C-methyl-D-erythritol 4-phosphate
thiamine diphosphate
(R)-pantothenate
(R)-4'-phosphopantothenate
oxaloacetate
phosphoenolpyruvate
(S)-3-methyl-2-oxopentanoate
4-methyl-2-oxopentanoate
3-methyl-2-oxobutanoate
N-acetyl-D-galactosamine 6-phosphate
D-galactosamine-6-phosphate
N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate
1,6-anhydro-N-acetyl-β-muramate
L-histidinol phosphate
histidinol
coproporphyrinogen III
nigerose
4'-phosphopantetheine
CO2
hydrogen selenide
O-acetyl-L-serine
H2O
hydrogen peroxide
(2E,6E)-farnesyl diphosphate
DNA with lesion
ethylphosphate
adenosylcobalamin
cob(I)alamin
cobalt-factor III
cobalt-precorrin-3
cobalt-sirohydrochlorin
cobalt-precorrin-7
cobalt-precorrin-8
cobalt-precorrin-6B
cobalt-precorrin-5B
cobalt-precorrin-6A
cobalt-precorrin-4
cobalt-precorrin-5A
chlorophyllide a
protochlorophyllide a
Mg-protoporphyrin
cob(I)yrinate a,c-diamide
adenosyl-cob(III)yrinate a,c-diamide
cob(I)inamide
adenosylcobinamide
3,8-divinyl protochlorophyllide a
131-oxo-magnesium-protoporphyrin IX 13-monomethyl ester
magnesium-protoporphyrin IX 13-monomethyl ester
131-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester
cob(II)yrinate c-monoamide
cob(II)yrinate a,c-diamide
cobyrinate
protoheme
hydrogen cyanide
protoporphyrin IX
uroporphyrinogen-III
protoporphyrinogen IX
oxygen
hydrogen sulfide
sn-glycerol 1-phosphate
sn-glycerol 3-phosphate
2,3-diphospho-D-glycerate
(R)-glycerate
3-phospho-D-glyceroyl-phosphate
2-phospho-D-glycerate
3-phospho-D-glycerate
dTDP-4-dehydro-6-deoxy-α-D-glucopyranose
(2R)-2,3-dihydroxy-3-methylbutanoate
α-D-glucosamine 6-phosphate
1-oleoyl-2-lyso-glycerone phosphate
5,10-methenyltetrahydrofolate mono-L-glutamate
nitric oxide
dimethyl sulfide
methanethiol
2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate
L-cysteate
3-sulfopyruvate
(2R)-3-sulfolactate
(2R)-phospho-3-sulfolactate
trimethyl sulfonium
thiosulfate
nitrate
hydrogencarbonate
phosphate
triphosphate
diphosphate
Fe3+
ammonium
H+
Mg2+
Fe2+
Co2+
glycine betaine
betaine aldehyde
2-aminoprop-2-enoate
(2Z)-2-aminobut-2-enoate
2-iminopropanoate
spermine
spermidine
putrescine
2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one
glycerophosphoglycerol
glycerophosphoserine
sn-glycero-3-phosphoethanolamine
fluoroacetaldehyde
fluoroacetate
5'-deoxy-5'-fluoroadenosine
5-fluoro-5-deoxy-D-ribose 1-phosphate
5-chloro-5-deoxy-D-ribonate
5-chloro-4-hydroxy-2-oxopentanoate
5'-chloro-5'-deoxyadenosine
5-chloro-5-deoxyribose 1-phosphate
pyrazinamide
5-amino-4-imidazolecarboxyamide
1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide
phosphoribulosylformimino-AICAR-phosphate
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide
nicotinamide
methyl (indol-3-yl)acetate
(indol-3-yl)acetate
(S)-3-aminobutanoyl-CoA
(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA
(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA
isobutanoyl-CoA
succinyl-CoA
3'-dephospho-CoA
malonyl-CoA
acetyl-CoA
(S)-methylmalonyl-CoA
(R)-methylmalonyl-CoA
crotonyl-CoA
(S)-malyl-CoA
oleoyl-CoA
cerotoyl-CoA
2-carboxy-cerotoyl-CoA
butanoyl-CoA
propanoyl-CoA
hexadecanedioyl-CoA
acetoacetyl-CoA
all-trans-retinyl palmitate
D-glucono-1,5-lactone
FMNH2
FMN
FAD
(S)-NADHX
(R)-NADHX
NADPH
NADH
NADP+
NAD+
ubiquinol-8
menaquinol-7
menaquinol-8
demethylmenaquinol-7
demethylmenaquinol-8
3-demethylubiquinol-8
coenzyme A
tetrahydropteroyl tri-L-glutamate
5,6,7,8-tetrahydrofolate
5,10-methylenetetrahydropteroyl mono-L-glutamate
10-formyl-tetrahydrofolate mono-L-glutamate
5-methyltetrahydropteroyl mono-L-glutamate
5-methyltetrahydropteroyl tri-L-glutamate
(6S)-5-formyl-tetrahydrofolate mono-L-glutamate
7,8-dihydrofolate monoglutamate
nicotinate
thiamine
riboflavin
pyridoxal 5'-phosphate
menadione
all-trans-retinol
(S)-1-pyrroline-5-carboxylate
precorrin-1
precorrin-2
sirohydrochlorin
6,7-dimethyl-8-(1-D-ribityl)lumazine
reduced riboflavin
7,8-dihydroneopterin 3'-phosphate
7,8-dihydroneopterin
6-(hydroxymethyl)-7,8-dihydropterin
(7,8-dihydropterin-6-yl)methyl diphosphate
7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate
7,8-dihydroneopterin 3'-triphosphate
7,8-dihydroneopterin 2',3'-cyclic phosphate
7,8-dihydropteroate
guanine
adenine
2'-deoxyadenosine
2'-deoxyguanosine
2'-deoxyinosine
inosine
guanosine
xanthosine
adenosine
hypoxanthine
dATP
dGTP
dADP
dGDP
GDP
ADP
GMP
XMP
IMP
AMP
GTP
ATP
dCTP
dUDP
dUTP
dUMP
orotate
CDP
dCMP
dCDP
dTMP
dTDP
dTTP
UTP
UDP
uracil
CTP
UDP-α-D-galactofuranose
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine
UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate
UDP-N-acetyl-α-D-muramoyl-L-alanine
UDP-N-acetyl-α-D-muramate
UDP-N-acetyl-α-D-glucosamine-enolpyruvate
UDP-N-acetyl-α-D-mannosamine
UDP-α-D-galactose
UDP-α-D-glucose
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine
UDP-N-acetyl-α-D-mannosaminuronate
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate
UDP-N-acetyl-α-D-glucosamine
dTDP-β-L-rhamnose
dTDP-4-dehydro-β-L-rhamnose
dTDP-α-D-glucose
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol
2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol
uridine
cytidine
thymidine
2'-deoxycytidine
2'-deoxyuridine
thymine
CMP
UMP
preQ1
luteolin
scopoletin
coumarin
4-methylumbelliferone
taxiphyllin
linustatin
neolinustatin
linamarin
lotaustralin
preQ0
2-hydroxy-2-methylpropanenitrile
(2R)-2-hydroxy-2-methylbutanenitrile
salicylaldehyde
urate
salicyl-6-hydroxy-2-cyclohexene-on-oyl
6-hydroxy-2-cyclohexen-one-carboxylate
benzaldehyde
indole
(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate
hydroquinone
menadiol
4-methylphenol
2,3-dihydroxybenzoate
protocatechuate
coumarinate
salicylate
4-aminobenzoate
benzoate
L-serine
creatine
β-alanine
L-proline
L-alanine
L-leucine
L-glutamine
glycine
D-glutamate
L-glutamate
L-lysine
L-histidine
Nω-hydroxy-L-arginine
L-arginine
L-aspartate
L-cysteine
L-tyrosine
L-threonine
L-tryptophan
L-phenylalanine
D-cysteine
D-alanine
L-aspartyl-4-phosphate
sarcosine
N-acetyl-L-ornithine
N-acetyl-L-glutamate
N-acetyl-L-methionine
N-carbamoyl-L-aspartate
O-acetyl-L-homoserine
3-phospho-L-serine
L-citrulline
L-isoleucine
L-valine
L-glutamate-5-semialdehyde
L-aspartate 4-semialdehyde
O-phospho-L-homoserine
L-ornithine
L-canaline
L-homoserine
O-succinyl-L-homoserine
S-adenosyl-L-methionine
S-adenosyl-L-homocysteine
S-sulfo-L-cysteine
L-homocysteine
meso-diaminopimelate
L-selenocysteine
L-allo-threonine
L-methionine
L,L-diaminopimelate
L-cystathionine
chorismate
(4S)-4-hydroxy-2-oxoglutarate
succinate
fumarate
(S)-malate
cis-aconitate
D-threo-isocitrate
(R)-lactate
(S)-lactate
pyruvate
acetate
formate
propanoate
butanoate
octanoate
apo-4'-lycopenoate
palmitate
D-gluconate
D-mannonate
(R)-pantoate
D-tagaturonate
β-D-glucuronate
aldehydo-D-galacturonate
3-(4-hydroxyphenyl)pyruvate
3-phenyl-2-oxopropanoate
glyoxylate
2-oxobutanoate
2-oxoglutarate
a methyl group
methylglyoxal
diacetyl
glycolaldehyde
butan-1-al
formaldehyde
1-octanal
acetaldehyde
(S)-lactaldehyde
L-glyceraldehyde
D-glyceraldehyde
α-D-glucopyranose
β-D-glucopyranose
β-D-ribopyranose
β-D-galactopyranose
α-D-galactopyranose
α-D-xylopyranose
aldehydo-D-ribose
α-D-ribofuranose
β-D-ribofuranose
butan-1-ol
ethanol
methanol
glycerol
galactitol
myo-inositol
galactinol
D-galactosylononitol
D-ononitol
phytate
D-myo-inositol (1,2,3,5,6) pentakisphosphate
1D-myo-inositol 3-monophosphate
1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate
1-oleoyl-sn-glycerol 3-phosphate
dioleoyl phosphatidate
trans,octacis-decaprenyl phosphate
di-trans,octa-cis-undecaprenyl phosphate
geranyl diphosphate
all-trans-octaprenyl diphosphate
geranylgeranyl diphosphate
all-trans-heptaprenyl diphosphate
mono-trans,octa-cis-decaprenyl diphosphate
di-trans,octa-cis-undecaprenyl diphosphate
apo-4'-lycopenal
1-(β-D ribofuranosyl)nicotinamide
isoprimeverose
XXLG xyloglucan oligosaccharide
XLXG xyloglucan oligosaccharide
XLLG xyloglucan oligosaccharide
XXXG xyloglucan oligosaccharide
raffinose
maltotriose
stachyose
maltotetraose
maltopentaose
maltoheptaose
maltohexaose
α-maltose
allolactose
melibiose
sucrose
α-lactose
β-D-cellobiose
keto-D-fructose
N-acetyl-α-D-glucosamine 1-phosphate
N-acetyl-α-D-mannosamine
N-acetyl-β-D-glucosamine
α-L-fucopyranose
β-L-fucopyranose
β-D-fructofuranose
L-fuculose
D-xylulose
L-ribulose
decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide
3'-ketolactose
decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)
a peptidoglycan dimer (mycobacteria)
undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine
a peptidoglycan with D,D cross-links (mycobacteria)
a peptidoglycan with L,D cross-links (mycobacteria)
a peptidoglycan dimer (meso-diaminopimelate containing)
a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)
ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine
GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala
D-ribulose-1,5-bisphosphate
undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine
N,N'-diacetylchitobiose 6'-phosphate
sucrose 6G-phosphate
N-monoacetylchitobiose 6'-phosphate
sucrose 6F-phosphate
β-D-cellobiose 6'-phosphate
ADP-α-D-glucose
GDP-α-D-glucose
GDP-α-D-mannose
D-glyceraldehyde 3-phosphate
α-D-glucopyranose 1-phosphate
1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate
D-sedoheptulose 7-phosphate
D-erythrose 4-phosphate
5-phospho-α-D-ribose 1-diphosphate
β-D-fructose 1,6-bisphosphate
arbutin-6-phosphate
salicin 6-phosphate
D-fructose 6-phosphate
β-D-fructofuranose 6-phosphate
β-D-mannopyranose 6-phosphate
α-D-mannopyranose 6-phosphate
α-D-glucose 6-phosphate
β-D-glucose 6-phosphate
D-xylulose 5-phosphate
1-deoxy-D-xylulose 5-phosphate
L-ribulose 5-phosphate
D-ribulose 5-phosphate
aldehydo-D-ribose 5-phosphate
β-D-ribose 5-phosphate
α-D-ribose 5-phosphate
α-D-ribose-1-phosphate
2-deoxy-α-D-ribose 1-phosphate
L-fuculose 1-phosphate
L-rhamnulose 1-phosphate
α-D-galactose 1-phosphate
β-D-glucopyranose 1-phosphate
β-D-fructofuranose 1-phosphate
α-D-mannose 1-phosphate
methyl β-D-glucoside 6-phosphate
D-altronate
1-(5-phospho-β-D-ribosyl)-AMP
ppGpp
adenylo-succinate
1-(5-phospho-β-D-ribosyl)-ATP
5'-deoxyadenosine
pppGpp
β-nicotinamide D-ribonucleotide
reduced β-nicotinamide D-ribonucleotide
2-sulfanyl-N6-dimethylallyladenosine37 in tRNA
2-methylsulfanyl-N6-dimethylallyladenosine37 in tRNA
cyclic di-3',5'-guanylate
2-iminobutanoate
2-iminosuccinate
L-alanyl-γ-D-glutamyl-meso-diaminopimelate
L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine
N-acetyl-L-glutaminyl-L-glutamine
N-acetyl-L-glutaminyl-L-glutamine amide
D-alanyl-D-alanine