an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

1-piperideine 6-carboxylate

1,2-dihydro-β-NADP

enol-phenylpyruvate

4-oxoglutaramate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

2,6-dioxo-6-phenylhexa-3-enoate

S-(hydroxymethyl)mycothiol

ammonia

malonate

N-carbamoyl-2-oxoglycine

oxamate

S-ribosyl-L-homocysteine

autoinducer 2

(salicyl)adenylate

selenodiglutathione

glutathioselenol

hydrogen selenide

2-dehydro-3-deoxy-D-galactonate 6-phosphate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

formamide

(S)-ureidoglycolate

shikimate

oxalate

2-amino-3-carboxymuconate-6-semialdehyde

N-acetyl-D-muramate 6-phosphate

1-(2-acetamido-2-deoxy-α-D-glucopyranosyl)-1D-myo-inositol

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

(R)-4'-phosphopantothenate

1-O-(2-acetamido-2-deoxy-α-D-glucopyranosyl)-1D-myo-inositol 3-phosphate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

2-succinylbenzoate

preuroporphyrinogen

porphobilinogen

(S)-4-amino-5-oxopentanoate

5-aminolevulinate

1,4-dihydroxy-2-naphthoate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

1,6-anhydro-N-acetyl-β-muramate

N-Formyl-L-kynurenine

thiamine phosphate

thiamine diphosphate

2-aminoacetaldehyde

3-methylgentisate

4-methylgentisate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

2-C-methyl-D-erythritol 4-phosphate

7,8-didemethyl-8-hydroxy-5-deazariboflavin

(2S)-lactyl-2-diphospho-5'-guanosine

shikimate 3-phosphate

selenophosphate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-phosphooxy-L-threonine

citraconate

(2R,3S)-3-methylmalate

pimeloyl-CoA

8-amino-7-oxononanoate

7,8-diaminopelargonate

dethiobiotin

3-phosphooxypyruvate

mycothione

(3S,5S)-3,5-diaminohexanoate

(S)-5-amino-3-oxohexanoate

L-β-lysine

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

(2-hydroxyphenyl)acetate

homogentisate

4-maleyl-acetoacetate

3-maleylpyruvate

3-fumarylpyruvate

4-hydroxy-2-nonenal

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

N⁵-carboxyaminoimidazole ribonucleotide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

N-acetylglutamyl-phosphate

L-canavanine

2-dehydro-3-deoxy-D-gluconate

2-dehydro-3-deoxy-D-galactonate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

O-acetyl-L-serine

acetyl phosphate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(4Z)-2-oxohept-4-enedioate

(4S)-4-hydroxy-2-oxoheptanedioate

anthranilate

3-hydroxyanthranilate

2-dehydropantoate

methylsalicylate

salicyl alcohol

L-arginino-succinate

O-ureido-L-homoserine

canavaninosuccinate

1-(2-amino-2-deoxy-α-D-glucopyranosyl)-1D-myo-inositol

coproporphyrinogen III

4-fumaryl-acetoacetate

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate

chloroacetaldehyde

2-oxopent-4-enoate

(S)-4-hydroxy-2-oxopentanoate

(S)-2-amino-6-oxohexanoate

2-keto-D-gluconate

2,5-didehydro-D-gluconate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

hydroxypyruvate

tartronate semialdehyde

2-phosphoglycolate

histidinal

histidinol

2-methyl-1,4-benzoquinone

methyl-1,4-benzoquinol

nicotine-1'-N-oxide

N,N-dimethylaniline

N,N-dimethylaniline-N-oxide

5-dehydro-2-deoxy-D-gluconate

5-dehydro-2-deoxy-D-gluconate 6-phosphate

β-D-ribosylnicotinate

acetoacetate

isochorismate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

4-methyl-3-oxoadipate

xanthine

5-oxo-L-proline

3-ureidopropanoate

barbiturate

ureidomalonate

N¹-(5-phospho-β-D-ribosyl)glycinamide

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

DNA without lesion

(lipoyl)adenylate

ethanolamine

D-erythro-imidazole-glycerol-phosphate

1-deoxy-L-glycero-tetrulose 4-phosphate

5-amino-6-(D-ribitylamino)uracil

2-maleylacetate

(R)-4'-phosphopantothenoyl-L-cysteine

4'-phosphopantetheine

orotidine 5'-phosphate

3-deoxy-D-arabino-heptulosonate 7-phosphate

5-enolpyruvoyl-shikimate 3-phosphate

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

N-carbamoylputrescine

carbonic acid

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

γ-L-glutamyl 5-phosphate

L-selenocystathionine

glycolate

2-protocatechuoylphloroglucinolcarboxylate

carbon monoxide

N²-succinylglutamate

3-mercaptopyruvate

prenyl diphosphate

muconolactone

(+)-muconolactone

cis,cis-muconate

(S)-2,3,4,5-tetrahydrodipicolinate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

D-gluconate 6-phosphate

β-nicotinate D-ribonucleotide

quinolinate

hydrogen peroxide

(R)-pantothenate

urea

dimethylamine

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

1,4-dihydroxy-2-naphthoyl-CoA

prephenate

glycerone phosphate

4-amino-4-deoxychorismate

(2S)-2-isopropylmalate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

(2S)-2-isopropyl-3-oxosuccinate

4-methyl-2-oxopentanoate

3-ethylmalate

2-oxovalerate

4-imidazolone-5-propanoate

urocanate

glutathione disulfide

5-phospho-β-D-ribosylamine

N-succinyl-2-amino-6-ketopimelate

N-succinyl-L,L-2,6-diaminopimelate

imidazole acetol-phosphate

L-histidinol phosphate

N-(5-phosphoribosyl)-anthranilate

N-acetyl-L-glutamate 5-semialdehyde

(S)-dihydroorotate

(E)-3-(methoxycarbonyl)pent-2-enedioate

α-D-glucosamine 1-phosphate

citrate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

3-methyl-2-oxobutanoate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-3-methyl-2-oxopentanoate

nicotinate adenine dinucleotide

aminoacetone

6-phospho D-glucono-1,5-lactone

4-aminobutanoate

succinate semialdehyde

3-oxopropanoate

oxaloacetate

phosphoenolpyruvate

carbamoyl phosphate

carboxyphosphate

3-dehydroquinate

3-dehydroshikimate

H₂O

isopentenyl diphosphate

oxalosuccinate

CO₂

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

L-homocysteine

phenylacetate

ethylphosphate

hydrogen cyanide

adenosylcobalamin

cob(I)alamin

adenosyl-cobinamide phosphate

Mg-protoporphyrin

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)inamide

adenosylcobinamide

protoheme

uroporphyrinogen-III

uroporphyrinogen-I

coproporphyrinogen I

protoporphyrinogen IX

protoporphyrin IX

siroheme

oxygen

hydrogen sulfide

2-iminobutanoate

2-iminopropanoate

2-iminosuccinate

2-chloroacetate

sn-glycerol 3-phosphate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2S)-2-phospholactate

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(S)-ureidoglycine

CMP-N-acetyl-β-neuraminate

(R)-citramalate

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

3-(all-trans-octaprenyl)benzene-1,2-diol

(S)-3-hydroxy-isobutanoate

2-octaprenylphenol

2-methoxy-6-(all-trans-octaprenyl)phenol

(S)-2-hydroxyglutarate

5'-deoxy-5'-fluoroadenosine

5-fluoro-5-deoxy-D-ribose 1-phosphate

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

5-chloro-5-deoxy-D-ribonate

5-chloro-4-hydroxy-2-oxopentanoate

3-chlorobenzoate

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

nitroethane

FADH₂

FAD

FMNH₂

FMN

(S)-NADHX

(R)-NADHX

caldariellaquinol

ubiquinol-8

demethylmenaquinol-8

3-demethylubiquinol-8

caldariellaquinone

NADH

NADPH

NAD⁺

NADP⁺

glycine betaine

hydroxyl radical

superoxide

(2E,6E)-farnesyl diphosphate

pristanate

N-acetyl-β-neuraminate

Fe³⁺

H⁺

ammonium

Mg²⁺

Fe²⁺

hydrogensulfite

OH^-

selenite

molybdate

thiosulfate

selenide

selenate

sulfite

nitrite

hydrogencarbonate

sulfate

phosphate

triphosphate

diphosphate

chloride

S-(hydroxymethyl)glutathione

γ-L-glutamyl-[(S)-allyl]-L-cysteine

S-allyl-L-cysteine

γ-L-glutamyl-(S)-methyl-L-cysteine

γ-L-glutamyl-(S)-trans-1-propenyl-L-cysteine

S-trans-1-propenyl-L-cysteine

mycothiol

deacetylmycothiol

thiocyanate

glutathione

methanethiol

S-sulfanylglutathione

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

taurine

L-cysteate

3-sulfopyruvate

3-sulfino-L-alanine

betaine aldehyde

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

agmatine

putrescine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-cysteinylglycine

D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

4-hydroxybenzoate

urate

phenylacetaldehyde

hydroquinone

menadiol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

all trans-decaprenyl-2-methoxy-6-1,4-benzoquinol

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

quercetin

catechol

2,3-dihydroxybenzoate

8'-(3,4-dihydroxy-5-alkenyl)phenyl-3-[9'E,11'E,13'Z-pentadecatrienyl]catechol

biphenyl-2,3-diol

protocatechuate

3-[(8Z,11E,13Z)-pentadeca-8,11,13-trien-1-yl] )catechol

dimeric urushiol peroxide

salicylate

3-hydroxybenzoate

3-hydroxy-5-methyl-benzoate

3-hydroxy-4-methyl-benzoate

4-aminobenzoate

(indole-3-yl)acetonitrile

molybdopterin

(R)-lipoate

coenzyme A

oxidized coenzyme F₄₂₀-0

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

7,8-dihydrofolate monoglutamate

tetrahydromethanopterin

5,10-methylene-tetrahydromethanopterin

MoO₂-molybdopterin cofactor

thiamine

nicotinate

riboflavin

pyridoxamine

pyridoxamine 5'-phosphate

pyridoxine 5'-phosphate

pyridoxal 5'-phosphate

all-trans-retinol

menadione

cholest-4-en-3-one

3-oxo-4-pregnene-20-carboxyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

(25S)-3-oxocholest-4-en-26-oyl-CoA

cholesterol

cholest-5-en-3-one

(+)-7-epi-jasmonate

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

cis-dienelactone

trans-dienelactone

all-trans-retinyl palmitate

2-methylbutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

methylacrylyl-CoA

(S)-3-aminobutanoyl-CoA

anthraniloyl-CoA

salicyl-CoA

gentisyl-CoA

phenylacetyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E)-tetradec-3-enoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

(3E)-undec-3-enoyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

malonyl-CoA

3'-dephospho-CoA

succinyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

4-hydroxybenzoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3E)-dec-3-enoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

6-cis, 3-oxo-tridecenoyl-CoA

4-cis-undecenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

2-trans-nonenoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

(+)-7-epi-jasmonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

6-trans-3-oxo-tridecenoyl-CoA

4-trans-undecenoyl-CoA

(2S)-ethylmalonyl-CoA

(2R)-ethylmalonyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

isobutanoyl-CoA

2-methylacetoacetyl-CoA

acetyl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

crotonyl-CoA

phytenoyl-CoA

(2E)-dec-2-enoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

phytanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

oleoyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

7-hydroxylauroyl-CoA

16-hydroxypalmitoyl-CoA

18-hydroxystearoyl-CoA

18-hydroxyoleoyl-CoA

(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(Z)-15-tetracosenoyl-CoA

butanoyl-CoA

propanoyl-CoA

hexanoyl-CoA

decanoyl-CoA

lauroyl-CoA

octanoyl-CoA

2-hydroxyphytanoyl-CoA

pristanoyl-CoA

myristoyl-CoA

palmitoyl-CoA

stearoyl-CoA

(4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA

4-methyl-3-oxoadipyl-CoA

3-oxoadipyl-CoA

(6Z,9Z,12Z,15Z,18Z,21Z)-3-oxotetracosahexaenoyl-CoA

(6Z,9Z,12Z,15Z,18Z)-3-oxotetracosapentaenoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

3-oxododecanoyl-CoA

3-oxodecanoyl-CoA

3-oxooctanoyl-CoA

3-oxohexanoyl-CoA

3-oxo-palmitoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-myristoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

allantoate

6-aminopenicillanate

isopenicillin N

penicillin G

(S)-(+)-allantoin

5-amino-4-imidazolecarboxyamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

chorismate

L-aspartate

succinate

fumarate

(S)-malate

α,ω-9Z-octadecenedioate

3-(carbamoylamino)-2-methylpropanoate

3-carboxy-cis,cis-muconate

trans-aconitate

cis-aconitate

D-threo-isocitrate

3-oxoadipate

pyruvate

acetate

formate

propanoate

(R)-lactate

(S)-lactate

butanoate

7-hydroxylaurate

decanoate

laurate

octanoate

gentisate

(R)-3-hydroxybutanoate

16-hydroxypalmitate

18-hydroxystearate

18-hydroxyoleate

(15Z)-tetracosenoate

leukotriene-D4

leukotriene-E4

oleate

palmitate

stearate

linoleate

α-linolenate

phytenate

D-mannonate

D-gluconate

(R)-pantoate

orotate

5-deoxy-D-glucuronate

(S)-1-pyrroline-5-carboxylate

L-α-amino-ε-keto-pimelate

L-2-aminoadipate

L-kynurenine

carbamate

L-serine

(R)-β-lysine

β-alanine

(R)-3-amino-2-methylpropanoate

(S)-3-amino-2-methylpropanoate

L-proline

L-leucine

L-alanine

glycine

L-glutamine

D-glutamate

L-glutamate

L-arginine

L-histidine

L-lysine

L-tyrosine

L-phenylalanine

L-tryptophan

D-alanine

L-saccharopine

seleno-L-homocysteine

L-aspartyl-4-phosphate

L-2-amino-3-oxobutanoate

3-phospho-L-serine

S-methyl-L-cysteine

N⁶,N⁶-dimethyl-L-arginine

(2S, 3S)-3-methylaspartate

N-carbamoyl-L-aspartate

N-carbamoylglycine

formyl-L-isoglutamine

N-formyl-L-glutamate

N-formimino-L-glutamate

N-acetyl-L-citrulline

N-acetyl-L-ornithine

N-acetyl-L-glutamate

N-acetyl-L-methionine

3-hydroxy-L-kynurenine

trans-4-hydroxy-L-proline

O-acetyl-L-homoserine

L-isoglutamine

L-asparagine

L-cystathionine

L-ornithine

L-isoleucine

L-valine

L,L-diaminopimelate

L-threonine

L-methionine

L-cysteine

L-citrulline

O-phospho-L-homoserine

L-canaline

O-succinyl-L-homoserine

hypoglycin A

L-homoserine

L-aspartate 4-semialdehyde

L-glutamate-5-semialdehyde

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

glyoxylate

2-oxobutanoate

2-oxoglutarate

hypoglycin B

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

glycerol

methanol

ethanol

1-octanol

1D-chiro-inositol

scyllo-inositol

myo-inositol

1-keto-D-chiro-inositol

scyllo-inosose

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

1D-myo-inositol 5-monophosphate

1D-myo-inositol 2-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 3-monophosphate

sphingosine

sphingosine 1-phosphate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

6-O-α-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

di-trans,octa-cis-undecaprenyl phosphate

all-trans-octaprenyl diphosphate

geranylgeranyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

3-octaprenyl-4-hydroxybenzoate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

(S)-nicotine

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(cysteinylglycine)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(cysteinyl)- 6-(hydroxymethyl)-diketopiperazine

1-(β-D ribofuranosyl)nicotinamide

maltotriose

raffinose

maltotetraose

stachyose

maltopentaose

maltoheptaose

maltohexaose

sucrose

α,α-trehalose

β-D-fructofuranose

α-L-rhamnopyranose

β-L-rhamnopyranose

keto-D-fructose

D-xylulose

α-D-ribofuranose

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-glucosamine

N-acetyl-α-D-mannosamine

D-glyceraldehyde

α-D-glucopyranose

β-D-glucopyranose

α-D-galactopyranose

β-D-galactopyranose

keto-L-rhamnulose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (S. aureus)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (mycobacteria)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (E. faeciums)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

N,N'-diacetylchitobiose 6'-phosphate

N-monoacetylchitobiose 6'-phosphate

α,α-trehalose 6-phosphate

UDP-α-D-glucose

ADP-α-D-glucose

dTDP-α-D-glucose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-mannosamine

UDP-α-D-galactose

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

GDP-α-D-mannose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

5-phospho-α-D-ribose 1-diphosphate

β-D-fructose 1,6-bisphosphate

salicin 6-phosphate

arbutin-6-phosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

L-rhamnulose 1-phosphate

α-D-galactose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

methyl β-D-glucoside 6-phosphate

D-galactonate

diacetyl

methylglyoxal

1-octanal

formaldehyde

isobutanal

acetaldehyde

(S)-lactaldehyde

precorrin-2

precorrin-1

sirohydrochlorin

hydantoin

dCTP

dCMP

dUTP

dTTP

5,6-dihydrouracil

5,6-dihydrothymine

UTP

CTP

dUMP

dTMP

dTDP

uracil

dUDP

UDP

dCDP

CDP

CMP

UMP

cytidine

uridine

thymidine

2'-deoxycytidine

2'-deoxyuridine

thymine

adenine

hypoxanthine

guanine

isoguanine

xanthosine

guanosine

inosine

adenosine

2'-deoxyadenosine

2'-deoxyinosine

2'-deoxyguanosine

ITP

GTP

ATP

IDP

GDP

ADP

GMP

XMP

IMP

AMP

dITP

dGTP

dATP

dIDP

dADP

dGDP

dGMP

dAMP

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

molybdopterin adenine dinucleotide

cyclic pyranopterin phosphate

7,8-dihydroneopterin 3'-triphosphate

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

7,8-dihydropteroate

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

8-oxo-GTP

8-oxo-dGTP

cyclic-GMP

cyclic-AMP

pppGpp

ppGpp

5'-deoxyadenosine

adenylo-succinate

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

cyclic di-3',5'-guanylate

2-hydroxy-dATP

5-hydroxy-CTP

5-hydroxy-CMP

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA