an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

1-piperideine 6-carboxylate

1,2-dihydro-β-NADP

enol-phenylpyruvate

4-oxoglutaramate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

S-(hydroxymethyl)mycothiol

ammonia

1-pyrroline

isopropylamine

S-ribosyl-L-homocysteine

autoinducer 2

selenodiglutathione

glutathioselenol

formamide

1-(2-acetamido-2-deoxy-α-D-glucopyranosyl)-1D-myo-inositol

H₂

glutathione disulfide

3-maleylpyruvate

(salicyl)adenylate

N-acetyl-D-muramate 6-phosphate

acrylate

digallate

gallate

2,5-dioxopentanoate

5-dehydro-4-deoxy-D-glucarate

(S)-2-amino-6-oxohexanoate

urea-1-carboxylate

3-(4-deoxy-β-D-gluc-4-enuronosyl)-N-acetyl-D-glucosamine

L-histidinol phosphate

citraconate

(2R,3S)-3-methylmalate

thiamine diphosphate

3-mercaptopyruvate

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-phosphooxy-L-threonine

3-phosphooxypyruvate

oxalate

3-hydroxypropanoate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

2-methyl-1,4-benzoquinone

methyl-1,4-benzoquinol

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

1-O-(2-acetamido-2-deoxy-α-D-glucopyranosyl)-1D-myo-inositol 3-phosphate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

(S)-4-amino-5-oxopentanoate

5-aminolevulinate

N¹-(5-phospho-β-D-ribosyl)glycinamide

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

5-oxo-L-proline

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

N⁵-carboxyaminoimidazole ribonucleotide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

7,8-didemethyl-8-hydroxy-5-deazariboflavin

(2S)-lactyl-2-diphospho-5'-guanosine

N-Formyl-L-kynurenine

1,6-anhydro-N-acetyl-β-muramate

(2-hydroxyphenyl)acetate

prephenate

S-adenosyl 3-(methylsulfanyl)propylamine

S-methyl-5'-thioadenosine

2-aminoacetaldehyde

(S)-2,3,4,5-tetrahydrodipicolinate

γ-L-glutamyl 5-phosphate

porphobilinogen

3-hydroxyanthranilate

4-prenylphlorisobutyrophenone

3-(O-geranylgeranyl)-sn-glycerol 1-phosphate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

nicotinate adenine dinucleotide

acetyl phosphate

chloroacetaldehyde

(R)-10-Hydroxystearate

L-selenocystathionine

methylamine

N-ethylglycine

2-iminoacetate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

thiamine phosphate

2-maleylacetate

histidinal

histidinol

imidazole acetol-phosphate

D-erythro-imidazole-glycerol-phosphate

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

3'-phosphoadenylyl-sulfate

N-carbamoylputrescine

2-C-methyl-D-erythritol 4-phosphate

(E)-2-methylgeranyl diphosphate

2-methylisoborneol

D-galacto-hexodialdose

1-(2-amino-2-deoxy-α-D-glucopyranosyl)-1D-myo-inositol

prenyl diphosphate

squalene

hop-22(29)-ene

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

4-fumaryl-acetoacetate

homogentisate

4-maleyl-acetoacetate

2-protocatechuoylphloroglucinolcarboxylate

carbon monoxide

quinolinate

D-phenylhydantoin

N-carbamoyl-D-phenylglycine

2-deoxygluconate

3-dehydro-2-deoxy-D-gluconate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(4Z)-2-oxohept-4-enedioate

pimeloyl-CoA

8-amino-7-oxononanoate

7,8-diaminopelargonate

dethiobiotin

phosphonoacetate

5-methylcytosine

ethanolamine

L-β-lysine

5-amino-6-(D-ribitylamino)uracil

(R)-4'-phosphopantothenoyl-L-cysteine

4'-phosphopantetheine

orotidine 5'-phosphate

(S)-dihydroorotate

shikimate

shikimate 3-phosphate

5-enolpyruvoyl-shikimate 3-phosphate

5,6-dimethylbenzimidazole

β-nicotinate D-ribonucleotide

α-ribazole 5'-phosphate

L-canavanine

N-acetyl-L-glutamate 5-semialdehyde

N-acetylglutamyl-phosphate

L-arginino-succinate

O-ureido-L-homoserine

canavaninosuccinate

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

xanthine

(S)-ureidoglycolate

hydroxypyruvate

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

(S)-5-hydroxyisourate

hydroxyatrazine

N-isopropylammelide

ethylamine

diethylphosphate

diethylthiophosphate

dimethylthiophosphate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

cyclohexanone

ε-caprolactone

isochorismate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-deoxy-D-arabino-heptulosonate 7-phosphate

hydrogenobyrinate a,c-diamide

γ-butyrobetaine

glycolate

6-phospho D-glucono-1,5-lactone

D-gluconate 6-phosphate

DNA without lesion

hydrogen peroxide

salicyl alcohol

coproporphyrinogen III

carbonic acid

acetoacetate

N-succinyl-L,L-2,6-diaminopimelate

N-succinyl-2-amino-6-ketopimelate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

(2S)-2-isopropyl-3-oxosuccinate

3-ethylmalate

2-oxovalerate

4-methyl-2-oxopentanoate

(2S)-2-isopropylmalate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

glycerone phosphate

4-aminobutanoate

succinate semialdehyde

3-oxopropanoate

α-D-glucosamine 1-phosphate

5-phospho-β-D-ribosylamine

4-amino-4-deoxychorismate

3-methyl-2-oxobutanoate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-3-methyl-2-oxopentanoate

(R)-pantothenate

(R)-4'-phosphopantothenate

urocanate

4-imidazolone-5-propanoate

hydrogen selenide

O-acetyl-L-serine

preuroporphyrinogen

citrate

isopentenyl diphosphate

N-(5-phosphoribosyl)-anthranilate

anthranilate

phosphoenolpyruvate

hydrogenobyrinate

oxalosuccinate

urea

2-dehydropantoate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

aminoacetone

oxaloacetate

1-deoxy-L-glycero-tetrulose 4-phosphate

carbamoyl phosphate

carboxyphosphate

3-dehydroquinate

H₂O

3-dehydroshikimate

CO₂

tartronate semialdehyde

DNA with lesion

4-methylphenol

L-homocysteine

phenylacetate

ethylphosphate

carboxyphosphinopyruvate

3-(hydroxyphosphinoyl)pyruvate

1-carboxyvinyl carboxyphosphonate

hydrogen cyanide

adenosylcobalamin

cob(I)alamin

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)inamide

adenosylcobinamide

adenosyl-cobinamide phosphate

cobalt-precorrin-6B

cobalt-precorrin-5B

cobalt-precorrin-6A

Mg-protoporphyrin

cob(II)yrinate c-monoamide

cob(II)yrinate a,c-diamide

cobyrinate

protoheme

protoporphyrin IX

uroporphyrinogen-I

coproporphyrinogen I

protoporphyrinogen IX

uroporphyrinogen-III

hydrogen sulfide

oxygen

2-iminosuccinate

2-iminopropanoate

2-iminobutanoate

2-chloroacetate

sn-glycerol 1-phosphate

sn-glycerol 3-phosphate

2-O-(α-D-glucopyranosyl)-D-glycerate

2-[2-O-(α-D-mannopyranosyl)-(1→2)-α-D-glucopyranosyl]-3-phospho-D-glycerate

2-[2-O-(α-D-mannopyranosyl)-(1→2)-α-D-glucopyranosyl]-D-glycerate

2-O-(α-D-glucopyranosyl)-3-phospho-D-glycerate

(R)-glycerate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2S)-2-phospholactate

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(S)-ureidoglycine

(R)-citramalate

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

3-(all-trans-octaprenyl)benzene-1,2-diol

(S)-3-hydroxy-isobutanoate

2-octaprenylphenol

2-methoxy-6-(all-trans-octaprenyl)phenol

(S)-2-hydroxyglutarate

ethene

5'-deoxy-5'-fluoroadenosine

5-fluoro-5-deoxy-D-ribose 1-phosphate

5-chloro-5-deoxy-D-ribonate

5-chloro-4-hydroxy-2-oxopentanoate

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

parathion

paraoxon

4-nitrophenol

FAD

FADH₂

FMNH₂

FMN

(S)-NADHX

(R)-NADHX

caldariellaquinol

ubiquinol-8

3-demethylubiquinol-8

caldariellaquinone

NADPH

NADH

NAD⁺

NADP⁺

glycine betaine

hydroxyl radical

superoxide

(2E,6E)-farnesyl diphosphate

pristanate

Fe³⁺

ammonium

H⁺

Fe²⁺

Mg²⁺

sulfate

hydrogensulfite

selenite

OH^-

selenate

sulfite

thiosulfate

hydrogencarbonate

phosphate

triphosphate

diphosphate

chloride

S-(hydroxymethyl)glutathione

γ-L-glutamyl-[(S)-allyl]-L-cysteine

S-allyl-L-cysteine

γ-L-glutamyl-(S)-methyl-L-cysteine

γ-L-glutamyl-(S)-trans-1-propenyl-L-cysteine

S-trans-1-propenyl-L-cysteine

methanethiol

mycothiol

thiocyanate

deacetylmycothiol

glutathione

S-sulfanylglutathione

4-methyl-5-(2-phosphooxyethyl)thiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

taurine

L-cysteate

3-sulfopyruvate

dodecyl sulfate

3-sulfino-L-alanine

betaine aldehyde

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

agmatine

4-aminobutanal

cadaverine

putrescine

spermidine

spermine

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanine

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-cysteinylglycine

D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

actinorhodin intermediate

actinorhodin

cyanuric acid

urate

4-hydroxybenzoate

atrazine

amino-parathion

methyl parathion

phenylacetaldehyde

hydroquinone

menadiol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

all trans-decaprenyl-2-methoxy-6-1,4-benzoquinol

4-aminophenol

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

quercetin

2,3-dihydroxybenzoate

8'-(3,4-dihydroxy-5-alkenyl)phenyl-3-[9'E,11'E,13'Z-pentadecatrienyl]catechol

protocatechuate

3-[(8Z,11E,13Z)-pentadeca-8,11,13-trien-1-yl] )catechol

dimeric urushiol peroxide

salicylate

4-aminobenzoate

acrylonitrile

coenzyme A

oxidized coenzyme F₄₂₀-0

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

7,8-dihydrofolate monoglutamate

tetrahydromethanopterin

5,10-methylene-tetrahydromethanopterin

nicotinamide

riboflavin

nicotinate

pyridoxamine 5'-phosphate

pyridoxine 5'-phosphate

pyridoxal 5'-phosphate

L-carnitine

menadione

cholest-4-en-3-one

3-oxo-4-pregnene-20-carboxyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

(25S)-3-oxocholest-4-en-26-oyl-CoA

lanosterol

solasodine 3-O-β-D-glucoside

stigmasterol 3-O-β-D-glucoside

ergosterol 3-O-β-D-glucoside

brassicasterol 3-O-β-D-glucoside

β-sitosterol 3-O-β-D-glucoside

cholesteryl-β-D-glucoside

cholest-5-en-3-one

solasodine

ergosterol

cholesterol

lanosteryl oleate

ergosteryl oleate

oleandomycin

glucosyl-oleandomycin

cis-dienelactone

trans-dienelactone

isovaleryl-CoA

acryloyl-CoA

methylacrylyl-CoA

anthraniloyl-CoA

salicyl-CoA

gentisyl-CoA

3-hydroxypropanoyl-CoA

(2S)-ethylmalonyl-CoA

(2R)-ethylmalonyl-CoA

isobutanoyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

3-methylcrotonyl-CoA

3-methylglutaconyl-CoA

3'-dephospho-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

4-hydroxybenzoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3E)-dec-3-enoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

6-cis, 3-oxo-tridecenoyl-CoA

4-cis-undecenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

2-trans-nonenoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

(+)-7-epi-jasmonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

6-trans-3-oxo-tridecenoyl-CoA

4-trans-undecenoyl-CoA

malonyl-CoA

succinyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3E)-undec-3-enoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E)-tetradec-3-enoyl-CoA

2-methylacetoacetyl-CoA

acetyl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

phytenoyl-CoA

(2E)-dec-2-enoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

phytanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

oleoyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

7-hydroxylauroyl-CoA

18-hydroxyoleoyl-CoA

18-hydroxystearoyl-CoA

16-hydroxypalmitoyl-CoA

(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(Z)-15-tetracosenoyl-CoA

butanoyl-CoA

propanoyl-CoA

hexanoyl-CoA

octanoyl-CoA

lauroyl-CoA

decanoyl-CoA

2-hydroxyphytanoyl-CoA

pristanoyl-CoA

myristoyl-CoA

stearoyl-CoA

palmitoyl-CoA

(4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA

3-oxoadipyl-CoA

(6Z,9Z,12Z,15Z,18Z,21Z)-3-oxotetracosahexaenoyl-CoA

(6Z,9Z,12Z,15Z,18Z)-3-oxotetracosapentaenoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

3-oxododecanoyl-CoA

3-oxodecanoyl-CoA

3-oxooctanoyl-CoA

3-oxohexanoyl-CoA

3-oxo-palmitoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-myristoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

tributyrin

1,2-dibutyrin

allantoate

6-aminopenicillanate

isopenicillin N

penicillin G

(S)-(+)-allantoin

5-amino-4-imidazolecarboxyamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

(3E)-2-oxohex-3-enedioate

chorismate

L-aspartate

succinate

fumarate

(S)-malate

D-glucarate

α,ω-9Z-octadecenedioate

(2S,3S)-2-methylcitrate

cis-2-methylaconitate

3-carboxy-cis,cis-muconate

(2R,3S)-2-methylisocitrate

cis-aconitate

D-threo-isocitrate

3-oxoadipate

pyruvate

acetate

formate

propanoate

(S)-lactate

(R)-lactate

butanoate

octanoate

laurate

decanoate

7-hydroxylaurate

gentisate

(R)-3-hydroxybutanoate

18-hydroxyoleate

18-hydroxystearate

16-hydroxypalmitate

(15Z)-tetracosenoate

leukotriene-E4

leukotriene-D4

(9Z,15Z)-12,13-epoxy-octadeca-9,15-dienoate

(12Z,15Z)-9,10-epoxyoctadeca-12,15-dienoate

(9Z,12Z)-15,16-epoxyoctadeca-9,12-dienoate

(9Z,15Z)-12,13-dihydroxyoctadeca-9,15-dienoate

(12Z,15Z)-9,10-dihydroxyoctadeca-12,15-dienoate

(9Z,12Z)-15,16-dihydroxyoctadeca-9,12-dienoate

oleate

α-linolenate

linoleate

stearate

palmitate

8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate

dinor-12-oxo-phytodienoate

phytenate

D-gluconate

orotate

(R)-pantoate

(S)-1-pyrroline-5-carboxylate

4-deoxy-L-threo-hex-4-enopyranuronate

L-α-amino-ε-keto-pimelate

L-2-aminoadipate

L-kynurenine

carbamate

L-serine

(R)-β-lysine

β-alanine

(S)-3-amino-2-methylpropanoate

L-proline

L-leucine

L-alanine

glycine

L-glutamine

D-glutamate

L-glutamate

L-histidine

L-arginine

L-lysine

L-phenylalanine

L-tyrosine

L-tryptophan

D-proline

D-alanine

L-saccharopine

seleno-L-homocysteine

L-aspartyl-4-phosphate

L-2-amino-3-oxobutanoate

3-phospho-L-serine

S-methyl-L-cysteine

sarcosine

N-carbamoyl-L-aspartate

formyl-L-isoglutamine

N-formyl-L-glutamate

N-formimino-L-glutamate

N-acetyl-L-ornithine

N-acetyl-L-glutamate

N-acetyl-L-methionine

trans-4-hydroxy-L-proline

3-hydroxy-L-kynurenine

L-methionine

L-cysteine

L-isoglutamine

L,L-diaminopimelate

L-cystathionine

L-2,4-diaminobutanoate

L-isoleucine

L-valine

L-selenocysteine

L-ornithine

L-threonine

L-citrulline

L-homoserine

1-aminocyclopropane-1-carboxylate

L-canaline

S-adenosyl-L-homocysteine

hypoglycin A

L-aspartate 4-semialdehyde

L-glutamate-5-semialdehyde

O-phospho-L-homoserine

S-sulfo-L-cysteine

S-adenosyl-L-methionine

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

4-(methylsulfanyl)-2-oxobutanoate

2-oxobutanoate

2-oxoglutarate

glyoxylate

hypoglycin B

sn-glycero-3-phosphoethanolamine

glycerophosphoglycerol

glycerophosphoserine

glycerol

ethanol

methanol

1-octanol

1-dodecanol

myo-inositol

1D-myo-inositol 5-monophosphate

1D-myo-inositol 2-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 3-monophosphate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

6-O-α-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

stigmasterol

brassicasterol

sitosterol

(8S,9S,10S)-8,10-dimethyl-1-octalin

(1E,4S,5E,7R)-germacra-1(10),5-dien-11-ol

(-)-geosmin

geranyl diphosphate

trans,octacis-decaprenyl phosphate

di-trans,octa-cis-undecaprenyl phosphate

all-trans-octaprenyl diphosphate

geranylgeranyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

3-octaprenyl-4-hydroxybenzoate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

5-deoxy-dihydrokalafungin

(S)-DNPA

2-((1R,3S),-1',9'-dihydroxy-1'-methyl-10'-oxo-3',4',5',10'-tetrahydro-1H-benzo[g]isochromen-3'-yl)acetate

4-(3'-acetyl-5'-hydroxy-4'-oxo-1',4'-dihydronapthalen-2'-yl)-3-oxobutanoate

(S)-4-(3'-acetyl-5'-hydroxy-4'-oxo-1',4'-dihydronapthalen-2'-yl)-3-hydroxybutanoate

phlorisovalerophenone

deoxycohumulone

4-prenylphlorisovalerophenone

deoxyhumulone

dihydrokalafungin

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(cysteinylglycine)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(cysteinyl)- 6-(hydroxymethyl)-diketopiperazine

5-dehydro-4-deoxy-D-glucuronate

maltotriose

cellotetraose

β-D-cellobiose

raffinose

stachyose

maltotetraose

maltoheptaose

maltohexaose

maltopentaose

α-maltose

sucrose

α,α-trehalose

β-D-fructofuranose

α-L-rhamnopyranose

β-L-rhamnopyranose

keto-D-fructose

D-xylulose

D-ribulose

L-ribulose

α-D-ribofuranose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-glucosamine

D-glyceraldehyde

β-D-glucopyranose

β-D-galactopyranose

α-D-galactopyranose

2-dehydro-D-glucopyranose

1-O-acetyl-α-maltose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

N,N'-diacetylchitobiose 6'-phosphate

N-monoacetylchitobiose 6'-phosphate

α-maltose 1-phosphate

α,α-trehalose 6-phosphate

UDP-α-D-glucose

ADP-α-D-glucose

GDP-α-D-glucose

dTDP-α-D-glucose

UDP-α-D-glucuronate

UDP-α-D-galactose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-β-L-rhamnose

dTDP-4-O-demethyl-β-L-noviose

dTDP-4-dehydro-5-methyl-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

GDP-4-dehydro-6-deoxy-β-L-galactose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-mannose

GDP-β-L-fucose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

5-phospho-α-D-ribose 1-diphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

β-D-fructose 1,6-bisphosphate

salicin 6-phosphate

arbutin-6-phosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

L-ribulose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

α-D-galactose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

methyl β-D-glucoside 6-phosphate

diacetyl

acetone

methylglyoxal

1-octanal

acetaldehyde

formaldehyde

precorrin-3B

precorrin-4

precorrin-5

precorrin-6B

precorrin-7

precorrin-8x

dUMP

dTMP

dTDP

dTTP

dUTP

dCTP

cytosine

dCMP

UTP

CTP

uracil

dUDP

UDP

dCDP

CDP

5-fluorouracil

UMP

CMP

uridine

cytidine

thymidine

2'-deoxycytidine

2'-deoxyuridine

thymine

guanine

adenine

hypoxanthine

isoguanine

xanthosine

guanosine

adenosine

inosine

2'-deoxyadenosine

2'-deoxyinosine

2'-deoxyguanosine

ITP

GTP

ATP

IDP

GDP

ADP

GMP

IMP

XMP

AMP

dITP

dGTP

dATP

dIDP

dGDP

dADP

dGMP

dAMP

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

7,8-dihydropteroate

8-oxo-GTP

8-oxo-dGTP

cyclic-AMP

cyclic-GMP

5'-deoxyadenosine

adenylo-succinate

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

5-fluorocytosine

cyclic di-3',5'-guanylate

2-hydroxy-dATP

5-hydroxy-CTP

5-hydroxy-CMP

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA